RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 DCP1AQ9NPI6 582 aaPredicted RBP17.41■□□□□ 0.38
CLDN11-207ENST00000486975 TMOD4Q9NZQ9 345 aa17.41■□□□□ 0.38
CLDN11-207ENST00000486975 MYPNQ86TC9 1320 aa17.41■□□□□ 0.38
CLDN11-207ENST00000486975 NAV1Q8NEY1 1877 aa17.4■□□□□ 0.38
CLDN11-207ENST00000486975 SHMT1P34896 483 aa17.4■□□□□ 0.38
CLDN11-207ENST00000486975 GPATCH3Q96I76 525 aa17.4■□□□□ 0.38
CLDN11-207ENST00000486975 C12orf42Q96LP6 360 aa17.4■□□□□ 0.38
CLDN11-207ENST00000486975 SCUBE2Q9NQ36 999 aa17.4■□□□□ 0.38
CLDN11-207ENST00000486975 MCM9Q9NXL9 1143 aa17.4■□□□□ 0.38
CLDN11-207ENST00000486975 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
CLDN11-207ENST00000486975 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-207ENST00000486975 PRKCZQ05513 592 aa17.39■□□□□ 0.37
CLDN11-207ENST00000486975 CERKLQ49MI3 558 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-207ENST00000486975 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
CLDN11-207ENST00000486975 RAET1EQ8TD07 263 aa17.39■□□□□ 0.37
CLDN11-207ENST00000486975 SH3TC2Q8TF17 1288 aa17.39■□□□□ 0.37
CLDN11-207ENST00000486975 SDR42E1Q8WUS8 393 aa17.39■□□□□ 0.37
CLDN11-207ENST00000486975 ARMT1Q9H993 441 aa17.39■□□□□ 0.37
CLDN11-207ENST00000486975 ATP8A2Q9NTI2 1148 aa17.39■□□□□ 0.37
CLDN11-207ENST00000486975 MORF4L1Q9UBU8 362 aa17.39■□□□□ 0.37
CLDN11-207ENST00000486975 TNPO2O14787 897 aaKnown RBP17.38■□□□□ 0.37
CLDN11-207ENST00000486975 MBD4O95243 580 aa17.38■□□□□ 0.37
CLDN11-207ENST00000486975 GRK4P32298 578 aa17.38■□□□□ 0.37
CLDN11-207ENST00000486975 IRF5Q13568 498 aa17.38■□□□□ 0.37
CLDN11-207ENST00000486975 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
CLDN11-207ENST00000486975 SLAIN1Q8ND83 568 aa17.38■□□□□ 0.37
CLDN11-207ENST00000486975 SPOCK2Q92563 424 aa17.38■□□□□ 0.37
CLDN11-207ENST00000486975 MGAMO43451 1857 aa17.37■□□□□ 0.37
CLDN11-207ENST00000486975 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-207ENST00000486975 IRX3P78415 501 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-207ENST00000486975 USP17L2Q6R6M4 530 aa17.37■□□□□ 0.37
CLDN11-207ENST00000486975 KBTBD3Q8NAB2 608 aa17.37■□□□□ 0.37
CLDN11-207ENST00000486975 GTF3C2Q8WUA4 911 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-207ENST00000486975 KIAA1683Q9H0B3 1180 aa17.37■□□□□ 0.37
CLDN11-207ENST00000486975 CABP5Q9NP86 173 aa17.37■□□□□ 0.37
CLDN11-207ENST00000486975 EMILIN3Q9NT22 766 aa17.37■□□□□ 0.37
CLDN11-207ENST00000486975 SWAP70Q9UH65 585 aa17.37■□□□□ 0.37
CLDN11-207ENST00000486975 FLT3LGP49771 235 aa17.36■□□□□ 0.37
CLDN11-207ENST00000486975 USP14P54578 494 aa17.36■□□□□ 0.37
CLDN11-207ENST00000486975 SLFNL1Q499Z3 407 aa17.36■□□□□ 0.37
CLDN11-207ENST00000486975 PXYLP1Q8TE99 480 aa17.36■□□□□ 0.37
CLDN11-207ENST00000486975 COA7Q96BR5 231 aa17.36■□□□□ 0.37
CLDN11-207ENST00000486975 GABRQQ9UN88 632 aa17.36■□□□□ 0.37
CLDN11-207ENST00000486975 TTC41PQ6P2S7 1318 aa17.36■□□□□ 0.37
CLDN11-207ENST00000486975 MYH7P12883 1935 aa17.35■□□□□ 0.37
CLDN11-207ENST00000486975 TNRC18O15417 2968 aaPredicted RBP17.35■□□□□ 0.37
CLDN11-207ENST00000486975 PRKAB2O43741 272 aa17.35■□□□□ 0.37
CLDN11-207ENST00000486975 CHRM1P11229 460 aaPredicted RBP17.35■□□□□ 0.37
CLDN11-207ENST00000486975 EN2P19622 333 aaPredicted RBP17.35■□□□□ 0.37
CLDN11-207ENST00000486975 HERVK_113P62684 666 aa17.35■□□□□ 0.37
CLDN11-207ENST00000486975 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
CLDN11-207ENST00000486975 P2RX7Q99572 595 aaKnown RBP17.35■□□□□ 0.37
CLDN11-207ENST00000486975 CHGBP05060 677 aa17.34■□□□□ 0.37
CLDN11-207ENST00000486975 ZFYP08048 801 aaPredicted RBP17.34■□□□□ 0.37
CLDN11-207ENST00000486975 GUCY1A2P33402 732 aa17.34■□□□□ 0.37
CLDN11-207ENST00000486975 UBXN2AP68543 259 aa17.34■□□□□ 0.37
CLDN11-207ENST00000486975 AAMPQ13685 434 aa17.34■□□□□ 0.37
CLDN11-207ENST00000486975 C12orf60Q5U649 245 aa17.34■□□□□ 0.37
CLDN11-207ENST00000486975 PRPF38BQ5VTL8 546 aaKnown RBP17.34■□□□□ 0.37
CLDN11-207ENST00000486975 DDRGK1Q96HY6 314 aa17.34■□□□□ 0.37
CLDN11-207ENST00000486975 FEZ1Q99689 392 aa17.34■□□□□ 0.37
CLDN11-207ENST00000486975 PUS7LQ9H0K6 701 aaKnown RBP17.34■□□□□ 0.37
CLDN11-207ENST00000486975 ADCY3O60266 1144 aa17.33■□□□□ 0.36
CLDN11-207ENST00000486975 CYP2D6P10635 497 aa17.33■□□□□ 0.36
CLDN11-207ENST00000486975 MTFR1Q15390 333 aa17.33■□□□□ 0.36
CLDN11-207ENST00000486975 TMEM179Q6ZVK1 233 aa17.33■□□□□ 0.36
CLDN11-207ENST00000486975 AMOTL1Q8IY63 956 aa17.33■□□□□ 0.36
CLDN11-207ENST00000486975 NKX2-3Q8TAU0 364 aa17.33■□□□□ 0.36
CLDN11-207ENST00000486975 APPBP2Q92624 585 aa17.33■□□□□ 0.36
CLDN11-207ENST00000486975 CRBNQ96SW2 442 aa17.33■□□□□ 0.36
CLDN11-207ENST00000486975 CENPFP49454 3210 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L15C9J2P7 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L13C9JLJ4 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L12C9JPN9 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L11C9JVI0 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L21D6R901 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L18D6R9N7 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L22D6RA61 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L17D6RBQ6 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L19D6RCP7 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L20D6RJB6 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 ERC2O15083 957 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
CLDN11-207ENST00000486975 GJB1P08034 283 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 VCAM1P19320 739 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 USP17L24Q0WX57 530 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 HDAC1Q13547 482 aaPredicted RBP17.32■□□□□ 0.36
CLDN11-207ENST00000486975 SEPT2Q15019 361 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 LRRFIP1Q32MZ4 808 aaKnown RBP17.32■□□□□ 0.36
CLDN11-207ENST00000486975 TSHZ3Q63HK5 1081 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 GIMAP6Q6P9H5 292 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 LBX2Q6XYB7 198 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 SLC44A5Q8NCS7 719 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 GPRC5AQ8NFJ5 357 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 PI4K2BQ8TCG2 481 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 ACER1Q8TDN7 264 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 CCDC17Q96LX7 622 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
CLDN11-207ENST00000486975 TXNRD2Q9NNW7 524 aa17.32■□□□□ 0.36
CLDN11-207ENST00000486975 RBPJLQ9UBG7 517 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms