RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 C8orf34Q49A92 452 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 NCOA7Q8NI08 942 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 NBPF3Q9H094 633 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 SH2D4AQ9H788 454 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 UPF2Q9HAU5 1272 aaKnown RBP13.45□□□□□ -0.26
NUP50-216ENST00000486184 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
NUP50-216ENST00000486184 THSD7BQ9C0I4 1608 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 LOC285556D6RIA3 1793 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 B4E1Z4 1266 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 E7EWF7 191 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 KDM4AO75164 1064 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 FGRP09769 529 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 VEGFBP49765 207 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 GTF2A2P52657 109 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 SREBF2Q12772 1141 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 SNAPC2Q13487 334 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 KRT32Q14532 448 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 SHROOM1Q2M3G4 852 aaPredicted RBP13.44□□□□□ -0.26
NUP50-216ENST00000486184 CCDC84Q86UT8 332 aaPredicted RBP13.44□□□□□ -0.26
NUP50-216ENST00000486184 IQCA1Q86XH1 822 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 ZNF280CQ8ND82 737 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
NUP50-216ENST00000486184 MANSC4A6NHS7 340 aaPredicted RBP13.43□□□□□ -0.26
NUP50-216ENST00000486184 FAM155AB1AL88 458 aaPredicted RBP13.43□□□□□ -0.26
NUP50-216ENST00000486184 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 IRF6O14896 467 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 CETPP11597 493 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 HSPA4P34932 840 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 JAG1P78504 1218 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 SPP2Q13103 211 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 CCDC178Q5BJE1 867 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 UBAC1Q9BSL1 405 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 WDR18Q9BV38 432 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 USP26Q9BXU7 913 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
NUP50-216ENST00000486184 ERICH2A1L162 156 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 C19orf81C9J6K1 198 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 CXCL11O14625 94 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 RAD21O60216 631 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 AOC2O75106 756 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 TTLL1O95922 423 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 GUCY1A2P33402 732 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 GJA5P36382 358 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 USP14P54578 494 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 MTMR2Q13614 643 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
NUP50-216ENST00000486184 GADL1Q6ZQY3 521 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
NUP50-216ENST00000486184 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 KCNH4Q9UQ05 1017 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 TACC3Q9Y6A5 838 aa13.42□□□□□ -0.26
NUP50-216ENST00000486184 CCL15-CCL14A0A0B4J2E2 113 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
NUP50-216ENST00000486184 MAP2K2P36507 400 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 HMGCS2P54868 508 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 BACE1P56817 501 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 INHBEP58166 350 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 KIF23Q02241 960 aaPredicted RBP13.41□□□□□ -0.26
NUP50-216ENST00000486184 ZYXQ15942 572 aaKnown RBP13.41□□□□□ -0.26
NUP50-216ENST00000486184 CCL15Q16663 113 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 OTUD7BQ6GQQ9 843 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 FASTKD5Q7L8L6 764 aaKnown RBP13.41□□□□□ -0.26
NUP50-216ENST00000486184 CLEC10AQ8IUN9 316 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 CEP95Q96GE4 821 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 GOPCQ9HD26 462 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 MTMR4Q9NYA4 1195 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 NYAP2Q9P242 653 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 CLIP2Q9UDT6 1046 aa13.41□□□□□ -0.26
NUP50-216ENST00000486184 HMGB1P09429 215 aaKnown RBP13.4□□□□□ -0.26
NUP50-216ENST00000486184 PSMA5P28066 241 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 MCM5P33992 734 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 NEK1Q96PY6 1258 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 ZSCAN10Q96SZ4 725 aaPredicted RBP13.4□□□□□ -0.26
NUP50-216ENST00000486184 ZKSCAN3Q9BRR0 538 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 TCP11L1Q9NUJ3 509 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 ZSWIM5Q9P217 1185 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 SNX14Q9Y5W7 946 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 TAF6LQ9Y6J9 622 aa13.4□□□□□ -0.26
NUP50-216ENST00000486184 TNKSO95271 1327 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 IGKV6D-41A0A0C4DH26 115 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 A0A0G2JLL6 359 aaPredicted RBP13.39□□□□□ -0.27
NUP50-216ENST00000486184 NMT2O60551 498 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 SEC24BO95487 1268 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 FGD1P98174 961 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 PABPC4Q13310 644 aaKnown RBP eCLIP13.39□□□□□ -0.27
NUP50-216ENST00000486184 TSGA10IPQ3SY00 556 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 PRRT2Q7Z6L0 340 aaPredicted RBP13.39□□□□□ -0.27
NUP50-216ENST00000486184 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 PROCA1Q8NCQ7 364 aaPredicted RBP13.39□□□□□ -0.27
NUP50-216ENST00000486184 ACER1Q8TDN7 264 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 JAKMIP1Q96N16 626 aaKnown RBP13.39□□□□□ -0.27
NUP50-216ENST00000486184 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
NUP50-216ENST00000486184 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms