RNA–Protein interactions for RNA: ENST00000485989.6

TACC3-210, Transcript of transforming acidic coiled-coil containing protein 3, human

TSL 3

Gene TACC3, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TACC3-210	ENST00000485989	ARPP21	Q9UBL0	812 aa	Predicted RBP	15.35	■□□□□ 0.05
TACC3-210	ENST00000485989	SWAP70	Q9UH65	585 aa		15.35	■□□□□ 0.05
TACC3-210	ENST00000485989	PNMA3	Q9UL41	463 aa		15.35	■□□□□ 0.05
TACC3-210	ENST00000485989	TRIM6-TRIM34	B2RNG4	842 aa		15.34	■□□□□ 0.05
TACC3-210	ENST00000485989	FMNL1	O95466	1100 aa	Predicted RBP	15.34	■□□□□ 0.05
TACC3-210	ENST00000485989	TDO2	P48775	406 aa		15.34	■□□□□ 0.05
TACC3-210	ENST00000485989	IRX3	P78415	501 aa	Predicted RBP	15.34	■□□□□ 0.05
TACC3-210	ENST00000485989	PABPC4	Q13310	644 aa	Known RBP eCLIP	15.34	■□□□□ 0.05
TACC3-210	ENST00000485989	USP17L2	Q6R6M4	530 aa		15.34	■□□□□ 0.05
TACC3-210	ENST00000485989	C16orf86	Q6ZW13	317 aa		15.34	■□□□□ 0.05
TACC3-210	ENST00000485989	EVI5L	Q96CN4	794 aa		15.34	■□□□□ 0.05
TACC3-210	ENST00000485989	C19orf81	C9J6K1	198 aa		15.33	■□□□□ 0.04
TACC3-210	ENST00000485989	MYC	P01106	439 aa	Predicted RBP	15.33	■□□□□ 0.04
TACC3-210	ENST00000485989	ARHGEF6	Q15052	776 aa		15.33	■□□□□ 0.04
TACC3-210	ENST00000485989	PLEKHM2	Q8IWE5	1019 aa		15.33	■□□□□ 0.04
TACC3-210	ENST00000485989	RILPL2	Q969X0	211 aa		15.33	■□□□□ 0.04
TACC3-210	ENST00000485989		A0A0D9SFI3	127 aa		15.32	■□□□□ 0.04
TACC3-210	ENST00000485989		A0A1W2PRG0	241 aa		15.32	■□□□□ 0.04
TACC3-210	ENST00000485989	FCGRT	P55899	365 aa		15.32	■□□□□ 0.04
TACC3-210	ENST00000485989	TMEM179	Q6ZVK1	233 aa		15.32	■□□□□ 0.04
TACC3-210	ENST00000485989	IFNL3	Q8IZI9	196 aa		15.32	■□□□□ 0.04
TACC3-210	ENST00000485989	SH3TC2	Q8TF17	1288 aa		15.32	■□□□□ 0.04
TACC3-210	ENST00000485989	FAM227B	Q96M60	508 aa		15.32	■□□□□ 0.04
TACC3-210	ENST00000485989	P2RX7	Q99572	595 aa	Known RBP	15.32	■□□□□ 0.04
TACC3-210	ENST00000485989	MYPN	Q86TC9	1320 aa		15.32	■□□□□ 0.04
TACC3-210	ENST00000485989	MGAM	O43451	1857 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	GNAT2	P19087	354 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	VCAM1	P19320	739 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	ATP2B2	Q01814	1243 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	ICA1	Q05084	483 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	PRKCZ	Q05513	592 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	SBK1	Q52WX2	424 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	PAGR1	Q9BTK6	254 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	KIAA1683	Q9H0B3	1180 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	PPP4R2	Q9NY27	417 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	GABRQ	Q9UN88	632 aa		15.31	■□□□□ 0.04
TACC3-210	ENST00000485989	PATL2	C9JE40	543 aa	Known RBP	15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	FOXP2	O15409	715 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	PRDM1	O75626	825 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	PDE4A	P27815	886 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	HOXA7	P31268	230 aa	Predicted RBP	15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	USP14	P54578	494 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	HERVK_113	P62684	666 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	NMI	Q13287	307 aa	Predicted RBP	15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	FAM110C	Q1W6H9	321 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	SLC9C1	Q4G0N8	1177 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	VPS53	Q5VIR6	699 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	GIMAP6	Q6P9H5	292 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	C12orf42	Q96LP6	360 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	ROBO3	Q96MS0	1386 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	NAPB	Q9H115	298 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	RPAP3	Q9H6T3	665 aa	Predicted RBP	15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	SRRD	Q9UH36	339 aa		15.3	■□□□□ 0.04
TACC3-210	ENST00000485989	TNPO2	O14787	897 aa	Known RBP	15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	RASA1	P20936	1047 aa		15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	GCLC	P48506	637 aa	Predicted RBP	15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	KIAA1755	Q5JYT7	1200 aa		15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	RAET1E	Q8TD07	263 aa		15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	CCDC17	Q96LX7	622 aa		15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	NACAP1	Q9BZK3	213 aa		15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	MKNK2	Q9HBH9	465 aa		15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	TXNRD2	Q9NNW7	524 aa		15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	TAOK2	Q9UL54	1235 aa		15.29	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L15	C9J2P7	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L13	C9JLJ4	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L11	C9JVI0	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L18	D6R9N7	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L22	D6RA61	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L17	D6RBQ6	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L19	D6RCP7	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L20	D6RJB6	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	EEF2	P13639	858 aa	Known RBP	15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	HOXD10	P28358	340 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	USP17L24	Q0WX57	530 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	POTEE	Q6S8J3	1075 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	SAMD1	Q6SPF0	538 aa	Predicted RBP	15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	ZNF589	Q86UQ0	364 aa	Predicted RBP	15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	SIAH1	Q8IUQ4	282 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	SPICE1	Q8N0Z3	855 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	ARMC5	Q96C12	935 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	ARHGEF10L	Q9HCE6	1279 aa		15.28	■□□□□ 0.04
TACC3-210	ENST00000485989	POTEF	A5A3E0	1075 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	RAD21	O60216	631 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	GNRH1	P01148	92 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	CTDSPL2	Q05D32	466 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	PPARA	Q07869	468 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	CATSPERG	Q6ZRH7	1159 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	ZNF333	Q96JL9	665 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	TANGO6	Q9C0B7	1094 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	OSBPL3	Q9H4L5	887 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	HELLS	Q9NRZ9	838 aa		15.27	■□□□□ 0.04
TACC3-210	ENST00000485989	GREB1L	Q9C091	1923 aa	Predicted RBP	15.27	■□□□□ 0.03
TACC3-210	ENST00000485989	SDS	P20132	328 aa		15.26	■□□□□ 0.03
TACC3-210	ENST00000485989	FLT3LG	P49771	235 aa		15.26	■□□□□ 0.03
TACC3-210	ENST00000485989	PRMT2	P55345	433 aa		15.26	■□□□□ 0.03
TACC3-210	ENST00000485989		Q3C1V9	767 aa		15.26	■□□□□ 0.03
TACC3-210	ENST00000485989	MCMDC2	Q4G0Z9	681 aa		15.26	■□□□□ 0.03
TACC3-210	ENST00000485989	VCPKMT	Q9H867	229 aa		15.26	■□□□□ 0.03
TACC3-210	ENST00000485989	INCENP	Q9NQS7	918 aa		15.26	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms