RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 POLLQ9UGP5 575 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 ATXN7L1Q9ULK2 861 aaPredicted RBP7.1□□□□□ -1.27
PTPN4-210ENST00000485247 PTCH2Q9Y6C5 1203 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 DUOX1Q9NRD9 1551 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 NUP98P52948 1817 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 ZNF609O15014 1411 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 A0A1W2PNR3 127 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 MANSC4A6NHS7 340 aaPredicted RBP7.09□□□□□ -1.27
PTPN4-210ENST00000485247 IGF2BP3O00425 579 aaKnown RBP eCLIP7.09□□□□□ -1.27
PTPN4-210ENST00000485247 U2SURPO15042 1029 aaKnown RBP7.09□□□□□ -1.27
PTPN4-210ENST00000485247 BCRP11274 1271 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 INHBEP58166 350 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 CTBSQ01459 385 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 SP3Q02447 781 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 MAP3K10Q02779 954 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 CRHR2Q13324 411 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 TEAD4Q15561 434 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 MCM10Q7L590 875 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 ZNF594Q96JF6 807 aaPredicted RBP7.09□□□□□ -1.27
PTPN4-210ENST00000485247 CALR3Q96L12 384 aaKnown RBP7.09□□□□□ -1.27
PTPN4-210ENST00000485247 PPP1R12CQ9BZL4 782 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 MYOZ2Q9NPC6 264 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 FZD1Q9UP38 647 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 PHF24Q9UPV7 400 aa7.09□□□□□ -1.27
PTPN4-210ENST00000485247 SFI1A8K8P3 1242 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 FGFR3P22607 806 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 MAP2K3P46734 347 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 GPSM2P81274 684 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 NBPF9Q3BBW0 867 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 PARP10Q53GL7 1025 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 C1orf229Q6ZS94 237 aaPredicted RBP7.08□□□□□ -1.28
PTPN4-210ENST00000485247 Q7L0L9 218 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 ARMC9Q7Z3E5 817 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 NLRP8Q86W28 1048 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 DEFB123Q8N688 67 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
PTPN4-210ENST00000485247 SH3TC2Q8TF17 1288 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 PHACTR3Q96KR7 559 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 EYA3Q99504 573 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 OXCT2Q9BYC2 517 aaPredicted RBP7.08□□□□□ -1.28
PTPN4-210ENST00000485247 TSPAN10Q9H1Z9 355 aaPredicted RBP7.08□□□□□ -1.28
PTPN4-210ENST00000485247 MIS18AQ9NYP9 233 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 ANGEL1Q9UNK9 670 aaKnown RBP7.08□□□□□ -1.28
PTPN4-210ENST00000485247 KNSTRNQ9Y448 316 aa7.08□□□□□ -1.28
PTPN4-210ENST00000485247 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
PTPN4-210ENST00000485247 TAF1P21675 1872 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 DCDC2BA2VCK2 349 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 NOS2P35228 1153 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 DCTN1Q14203 1278 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 ARSJQ5FYB0 599 aaPredicted RBP7.07□□□□□ -1.28
PTPN4-210ENST00000485247 LDLRAD1Q5T700 205 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 TMC4Q7Z404 712 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPN4-210ENST00000485247 AGBL3Q8NEM8 1001 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 RTF1Q92541 710 aaKnown RBP7.07□□□□□ -1.28
PTPN4-210ENST00000485247 ZNF428Q96B54 188 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 ZC3H12CQ9C0D7 883 aaKnown RBP7.07□□□□□ -1.28
PTPN4-210ENST00000485247 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 STXBP5LQ9Y2K9 1186 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 PCDHGC4Q9Y5F7 938 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 NR2E3Q9Y5X4 410 aa7.07□□□□□ -1.28
PTPN4-210ENST00000485247 A0A1W2PPC1 479 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 M0R2N6 131 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 EML1O00423 815 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 ATXN7O15265 892 aaPredicted RBP7.06□□□□□ -1.28
PTPN4-210ENST00000485247 OIP5O43482 229 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 CRTC2Q53ET0 693 aaPredicted RBP7.06□□□□□ -1.28
PTPN4-210ENST00000485247 OTUD7BQ6GQQ9 843 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 FIGNL1Q6PIW4 674 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 TBC1D16Q8TBP0 767 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 CELF1Q92879 486 aaKnown RBP7.06□□□□□ -1.28
PTPN4-210ENST00000485247 SHISA4Q96DD7 197 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 WNK4Q96J92 1243 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 CLMNQ96JQ2 1002 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 GMLQ99445 158 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 HTATIP2Q9BUP3 242 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 STAP2Q9UGK3 403 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 TRMT112Q9UI30 125 aaKnown RBP7.06□□□□□ -1.28
PTPN4-210ENST00000485247 GTF3C3Q9Y5Q9 886 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 SCN9AQ15858 1988 aa7.06□□□□□ -1.28
PTPN4-210ENST00000485247 LAMB2P55268 1798 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 SHISA8B8ZZ34 492 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 RNF225M0QZC1 329 aaPredicted RBP7.05□□□□□ -1.28
PTPN4-210ENST00000485247 ZBTB48P10074 688 aaPredicted RBP7.05□□□□□ -1.28
PTPN4-210ENST00000485247 MAPTP10636 758 aaKnown RBP7.05□□□□□ -1.28
PTPN4-210ENST00000485247 BMP4P12644 408 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 RASA1P20936 1047 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 PRKAR2BP31323 418 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 MARSP56192 900 aaKnown RBP7.05□□□□□ -1.28
PTPN4-210ENST00000485247 TNP2Q05952 138 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 ARHGEF6Q15052 776 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 PTPN18Q99952 460 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 THUMPD2Q9BTF0 503 aaKnown RBP7.05□□□□□ -1.28
PTPN4-210ENST00000485247 MTMR10Q9NXD2 777 aa7.05□□□□□ -1.28
PTPN4-210ENST00000485247 SH3TC1Q8TE82 1336 aa7.04□□□□□ -1.28
PTPN4-210ENST00000485247 SERTM1A2A2V5 107 aa7.04□□□□□ -1.28
PTPN4-210ENST00000485247 WNT10BO00744 389 aa7.04□□□□□ -1.28
PTPN4-210ENST00000485247 UFL1O94874 794 aa7.04□□□□□ -1.28
PTPN4-210ENST00000485247 SASH1O94885 1247 aa7.04□□□□□ -1.28
PTPN4-210ENST00000485247 FAM157BP0CG42 384 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms