RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PICK1Q9NRD5 415 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 SBNO2Q9Y2G9 1366 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 FARP2O94887 1054 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-211ENST00000484581 NEFMP07197 916 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 CELA3AP09093 270 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 ITIH2P19823 946 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 ERVK-24P63145 666 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 PKN1Q16512 942 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 ANGEL2Q5VTE6 544 aaKnown RBP6.57□□□□□ -1.36
VPS13A-211ENST00000484581 ANKS3Q6ZW76 656 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 TMEM40Q8WWA1 233 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 GTF2IRD1Q9UHL9 959 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS13A-211ENST00000484581 SAMM50Q9Y512 469 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 CARMIL2Q6F5E8 1435 aa6.57□□□□□ -1.36
VPS13A-211ENST00000484581 PF4P02776 101 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 HSD3B2P26439 372 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 ETFBP38117 255 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 RPS26P62854 115 aaKnown RBP6.56□□□□□ -1.36
VPS13A-211ENST00000484581 FAM160A1Q05DH4 1040 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 TCEAL1Q15170 157 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 SNAP47Q5SQN1 464 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 PCNX4Q63HM2 1172 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 AGMOQ6ZNB7 445 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 GPBAR1Q8TDU6 330 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 NECAB3Q96P71 396 aaPredicted RBP6.56□□□□□ -1.36
VPS13A-211ENST00000484581 TRIM55Q9BYV6 548 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 ADAMTS6Q9UKP5 1117 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 PLAGL2Q9UPG8 496 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 SNX11Q9Y5W9 270 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 MRPL42Q9Y6G3 142 aaKnown RBP6.56□□□□□ -1.36
VPS13A-211ENST00000484581 U3KQE9 123 aa6.56□□□□□ -1.36
VPS13A-211ENST00000484581 ENPP3O14638 875 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 ENC1O14682 589 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 U2SURPO15042 1029 aaKnown RBP6.55□□□□□ -1.36
VPS13A-211ENST00000484581 KLF4O43474 513 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 APOBRQ0VD83 1088 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 CAMK2GQ13555 558 aaPredicted RBP6.55□□□□□ -1.36
VPS13A-211ENST00000484581 RAB33AQ14088 237 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 FBLN7Q53RD9 439 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 TTBK2Q6IQ55 1244 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 FAM196AQ6ZSG2 479 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 CDC37L1Q7L3B6 337 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 SLITRK4Q8IW52 837 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 GOLM1Q8NBJ4 401 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 LRRN4CLQ8ND94 238 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 UBP1Q9NZI7 540 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 PRKAG3Q9UGI9 489 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 MRVI1Q9Y6F6 885 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
VPS13A-211ENST00000484581 ROBO2Q9HCK4 1378 aa6.55□□□□□ -1.36
VPS13A-211ENST00000484581 CLSTN1O94985 981 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 TNNI3KQ59H18 835 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 SLC23A3Q6PIS1 610 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 LRP10Q7Z4F1 713 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 CCDC84Q86UT8 332 aaPredicted RBP6.54□□□□□ -1.36
VPS13A-211ENST00000484581 CPLX3Q8WVH0 158 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 HNRNPLLQ8WVV9 542 aaKnown RBP6.54□□□□□ -1.36
VPS13A-211ENST00000484581 ASB11Q8WXH4 323 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 NKD1Q969G9 470 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 SRPK1Q96SB4 655 aaKnown RBP6.54□□□□□ -1.36
VPS13A-211ENST00000484581 SRRTQ9BXP5 876 aaKnown RBP6.54□□□□□ -1.36
VPS13A-211ENST00000484581 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 PRDM10Q9NQV6 1147 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 SNTG2Q9NY99 539 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 CSADQ9Y600 493 aa6.54□□□□□ -1.36
VPS13A-211ENST00000484581 TFE3P19532 575 aaPredicted RBP6.53□□□□□ -1.36
VPS13A-211ENST00000484581 CRKP46108 304 aa6.53□□□□□ -1.36
VPS13A-211ENST00000484581 IKZF1Q13422 519 aa6.53□□□□□ -1.36
VPS13A-211ENST00000484581 RASA3Q14644 834 aa6.53□□□□□ -1.36
VPS13A-211ENST00000484581 ZNF124Q15973 351 aa6.53□□□□□ -1.36
VPS13A-211ENST00000484581 PPM1JQ5JR12 505 aa6.53□□□□□ -1.36
VPS13A-211ENST00000484581 SPOCD1Q6ZMY3 1216 aa6.53□□□□□ -1.36
VPS13A-211ENST00000484581 SHDQ96IW2 340 aa6.53□□□□□ -1.36
VPS13A-211ENST00000484581 HEXIM2Q96MH2 286 aaKnown RBP6.53□□□□□ -1.36
VPS13A-211ENST00000484581 SLC38A3Q99624 504 aa6.53□□□□□ -1.36
VPS13A-211ENST00000484581 R3HCC1Q9Y3T6 440 aaKnown RBP6.53□□□□□ -1.36
VPS13A-211ENST00000484581 DBX1A6NMT0 343 aa6.52□□□□□ -1.37
VPS13A-211ENST00000484581 GNAT3A8MTJ3 354 aa6.52□□□□□ -1.37
VPS13A-211ENST00000484581 DCDC2CA8MYV0 355 aa6.52□□□□□ -1.37
VPS13A-211ENST00000484581 IGF2BP3O00425 579 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS13A-211ENST00000484581 ZNF252P-AS1Q0IIN9 211 aa6.52□□□□□ -1.37
VPS13A-211ENST00000484581 LRRC14Q15048 493 aa6.52□□□□□ -1.37
VPS13A-211ENST00000484581 ANAPC16Q96DE5 110 aa6.52□□□□□ -1.37
VPS13A-211ENST00000484581 DEPDC7Q96QD5 511 aa6.52□□□□□ -1.37
VPS13A-211ENST00000484581 TNKS2Q9H2K2 1166 aa6.52□□□□□ -1.37
VPS13A-211ENST00000484581 FANCGO15287 622 aa6.51□□□□□ -1.37
VPS13A-211ENST00000484581 TRIM37O94972 964 aa6.51□□□□□ -1.37
VPS13A-211ENST00000484581 ZP2Q05996 745 aa6.51□□□□□ -1.37
VPS13A-211ENST00000484581 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
VPS13A-211ENST00000484581 FAM214BQ7L5A3 538 aa6.51□□□□□ -1.37
VPS13A-211ENST00000484581 C12orf40Q86WS4 652 aa6.51□□□□□ -1.37
VPS13A-211ENST00000484581 GRIN3AQ8TCU5 1115 aa6.51□□□□□ -1.37
VPS13A-211ENST00000484581 PAGE1O75459 146 aa6.5□□□□□ -1.37
VPS13A-211ENST00000484581 LMNB1P20700 586 aa6.5□□□□□ -1.37
VPS13A-211ENST00000484581 MPP2Q14168 576 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms