RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 COL9A3Q14050 684 aaPredicted RBP7.13□□□□□ -1.27
COPA-203ENST00000481040 TTF1Q15361 905 aaPredicted RBP7.13□□□□□ -1.27
COPA-203ENST00000481040 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 ALYREFQ86V81 257 aaKnown RBP7.13□□□□□ -1.27
COPA-203ENST00000481040 AFAP1L2Q8N4X5 818 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 ATL2Q8NHH9 583 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 ZNF526Q8TF50 670 aaPredicted RBP7.13□□□□□ -1.27
COPA-203ENST00000481040 RELTQ969Z4 430 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 CLUHP3Q96NS8 147 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 CDC6Q99741 560 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 SOX17Q9H6I2 414 aaPredicted RBP7.13□□□□□ -1.27
COPA-203ENST00000481040 KRT82Q9NSB4 513 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 NAGPAQ9UK23 515 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 ZNF214Q9UL59 606 aaPredicted RBP7.13□□□□□ -1.27
COPA-203ENST00000481040 MRPS23Q9Y3D9 190 aaKnown RBP7.13□□□□□ -1.27
COPA-203ENST00000481040 STARD13Q9Y3M8 1113 aa7.13□□□□□ -1.27
COPA-203ENST00000481040 A0A1W2PQU0 124 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 H3BRJ5 948 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 CCNFP41002 786 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 NFE2Q16621 373 aaPredicted RBP7.12□□□□□ -1.27
COPA-203ENST00000481040 SV2CQ496J9 727 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 FAM209AQ5JX71 171 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 AXDND1Q5T1B0 1012 aaPredicted RBP7.12□□□□□ -1.27
COPA-203ENST00000481040 CYFIP1Q7L576 1253 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 WDR75Q8IWA0 830 aaKnown RBP7.12□□□□□ -1.27
COPA-203ENST00000481040 ELMO3Q96BJ8 720 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 IPO9Q96P70 1041 aaKnown RBP7.12□□□□□ -1.27
COPA-203ENST00000481040 LPIN3Q9BQK8 851 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 CORO1BQ9BR76 489 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 TARS2Q9BW92 718 aaKnown RBP7.12□□□□□ -1.27
COPA-203ENST00000481040 CCDC86Q9H6F5 360 aaKnown RBP7.12□□□□□ -1.27
COPA-203ENST00000481040 ARHGEF4Q9NR80 690 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 KLHL3Q9UH77 587 aa7.12□□□□□ -1.27
COPA-203ENST00000481040 ELOA3CA0A087WX78 387 aaPredicted RBP7.11□□□□□ -1.27
COPA-203ENST00000481040 TRBV23-1A0A0A0MS06 115 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 TRAV20A0A0B4J274 112 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 ELOA3DA6NLF2 546 aaPredicted RBP7.11□□□□□ -1.27
COPA-203ENST00000481040 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
COPA-203ENST00000481040 ECEL1O95672 775 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 CYP11A1P05108 521 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 GUCY2FP51841 1108 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 ELOA3BQ3SY89 546 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 GDF6Q6KF10 455 aaPredicted RBP7.11□□□□□ -1.27
COPA-203ENST00000481040 CNNM4Q6P4Q7 775 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 C8orf86Q6ZUL3 223 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 ELOA3Q8NG57 546 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 TNFRSF25Q93038 417 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 FRRS1LQ9P0K9 344 aa7.11□□□□□ -1.27
COPA-203ENST00000481040 DNAJC25-GNG10A0A024R161 153 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 CHURC1-FNTBB4DL54 471 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 KIF3BO15066 747 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 TSPAN6O43657 245 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 SDSP20132 328 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 ZNF143P52747 638 aaPredicted RBP7.1□□□□□ -1.27
COPA-203ENST00000481040 RHBDL3P58872 404 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 HSP90AA2PQ14568 343 aaPredicted RBP7.1□□□□□ -1.27
COPA-203ENST00000481040 POU4F3Q15319 338 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 XP32Q5T750 250 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 LRRTM3Q86VH5 581 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 SMC5Q8IY18 1101 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 CACTIN-AS1Q8N1I8 211 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 SLC7A3Q8WY07 619 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 TTC9Q92623 222 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 PLVAPQ9BX97 442 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 MRPL4Q9BYD3 311 aaKnown RBP7.1□□□□□ -1.27
COPA-203ENST00000481040 ADAM30Q9UKF2 790 aa7.1□□□□□ -1.27
COPA-203ENST00000481040 DCDC2CA8MYV0 355 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 ZNF862O60290 1169 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 ALBP02768 609 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 PGRP06401 933 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 NAT2P11245 290 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 RAG1P15918 1043 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 CPEP16870 476 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 CDC25BP30305 580 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 GRK4P32298 578 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 ADH7P40394 386 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 ARL4DP49703 201 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 PPP2R5AQ15172 486 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 BBS9Q3SYG4 887 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 YOD1Q5VVQ6 348 aaPredicted RBP7.09□□□□□ -1.27
COPA-203ENST00000481040 CCSAPQ6IQ19 270 aaPredicted RBP7.09□□□□□ -1.27
COPA-203ENST00000481040 STRA8Q7Z7C7 330 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 SCUBE1Q8IWY4 988 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 RIN3Q8TB24 985 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 AARSD1Q9BTE6 412 aaKnown RBP7.09□□□□□ -1.27
COPA-203ENST00000481040 PCGF6Q9BYE7 350 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 NRSN2Q9GZP1 204 aa7.09□□□□□ -1.27
COPA-203ENST00000481040 INTS7Q9NVH2 962 aaKnown RBP7.09□□□□□ -1.27
COPA-203ENST00000481040 PRAMEF27A3QJZ7 478 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 ANKRD34BA5PLL1 514 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 ADARB2-AS1A8MUL3 147 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 KATNA1O75449 491 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 EIF3JO75822 258 aaKnown RBP7.08□□□□□ -1.28
COPA-203ENST00000481040 RASGRP1O95267 797 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 EYA4O95677 639 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 MAOBP27338 520 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 POLR2BP30876 1174 aaKnown RBP7.08□□□□□ -1.28
COPA-203ENST00000481040 PIP4K2BP78356 416 aa7.08□□□□□ -1.28
COPA-203ENST00000481040 HNRNPUQ00839 825 aaKnown RBP eCLIP7.08□□□□□ -1.28
COPA-203ENST00000481040 MCL1Q07820 350 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms