RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 RNF41Q9H4P4 317 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-219ENST00000479941 KANSL2Q9H9L4 492 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATG4B-219ENST00000479941 MYH8P13535 1937 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 FOXN1O15353 648 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 ORC4O43929 436 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 TSPY3P0CV98 308 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 TSPY8P0CW00 308 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 HMGCS2P54868 508 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 HAND2P61296 217 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 ICA1Q05084 483 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 MTMR2Q13614 643 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 AKNAD1Q5T1N1 836 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 GADL1Q6ZQY3 521 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 STAG1Q8WVM7 1258 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 MAP4K1Q92918 833 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 FEZ1Q99689 392 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 SH2D4AQ9H788 454 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
ATG4B-219ENST00000479941 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-219ENST00000479941 PDHXO00330 501 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 TFAP4Q01664 338 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 PTH1RQ03431 593 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.36
ATG4B-219ENST00000479941 TAF1CQ15572 869 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-219ENST00000479941 PPP4R3BQ5MIZ7 849 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 GPAT2Q6NUI2 795 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 NEDD1Q8NHV4 660 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 ACER1Q8TDN7 264 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 C12orf42Q96LP6 360 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
ATG4B-219ENST00000479941 KIAA1683Q9H0B3 1180 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 ZFYVE28Q9HCC9 887 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 TOMM22Q9NS69 142 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 AGTPBP1Q9UPW5 1226 aa12.83□□□□□ -0.36
ATG4B-219ENST00000479941 PLIN4Q96Q06 1357 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 IGKV6D-41A0A0C4DH26 115 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 A0A1W2PRG0 241 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 TSPY2A6NKD2 308 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 RANBP6O60518 1105 aaKnown RBP12.82□□□□□ -0.36
ATG4B-219ENST00000479941 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 HSPA8P11142 646 aaKnown RBP12.82□□□□□ -0.36
ATG4B-219ENST00000479941 NOM1Q5C9Z4 860 aaKnown RBP12.82□□□□□ -0.36
ATG4B-219ENST00000479941 FAM47AQ5JRC9 791 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 SIAH1Q8IUQ4 282 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 LSG1Q9H089 658 aaKnown RBP12.82□□□□□ -0.36
ATG4B-219ENST00000479941 NBPF3Q9H094 633 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 ANO2Q9NQ90 1003 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 NYAP2Q9P242 653 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 PNMA3Q9UL41 463 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 TMX2Q9Y320 296 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 TACC3Q9Y6A5 838 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 PTPRFP10586 1907 aa12.82□□□□□ -0.36
ATG4B-219ENST00000479941 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
ATG4B-219ENST00000479941 CRHR2Q13324 411 aa12.81□□□□□ -0.36
ATG4B-219ENST00000479941 RRP12Q5JTH9 1297 aaKnown RBP12.81□□□□□ -0.36
ATG4B-219ENST00000479941 TREML2Q5T2D2 321 aa12.81□□□□□ -0.36
ATG4B-219ENST00000479941 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
ATG4B-219ENST00000479941 ESR2Q92731 530 aa12.81□□□□□ -0.36
ATG4B-219ENST00000479941 PARK7Q99497 189 aaKnown RBP12.81□□□□□ -0.36
ATG4B-219ENST00000479941 MTMR4Q9NYA4 1195 aa12.81□□□□□ -0.36
ATG4B-219ENST00000479941 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
ATG4B-219ENST00000479941 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
ATG4B-219ENST00000479941 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-219ENST00000479941 TLR2O60603 784 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 TTLL1O95922 423 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 CYP21A2P08686 494 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 OSBPP22059 807 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 HOXA7P31268 230 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-219ENST00000479941 LBX1P52954 281 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 ATP2B2Q01814 1243 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 DGKZQ13574 1117 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 ZYXQ15942 572 aaKnown RBP12.8□□□□□ -0.36
ATG4B-219ENST00000479941 CLEC10AQ8IUN9 316 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 LPAR1Q92633 364 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 MKL1Q969V6 931 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 CEP95Q96GE4 821 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 KRT23Q9C075 422 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 VCPKMTQ9H867 229 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 TCP11L1Q9NUJ3 509 aa12.8□□□□□ -0.36
ATG4B-219ENST00000479941 RBM8AQ9Y5S9 174 aaKnown RBP12.8□□□□□ -0.36
ATG4B-219ENST00000479941 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 GPR25O00155 361 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 VCAM1P19320 739 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 TRDNQ13061 729 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 R3HDMLQ9H3Y0 253 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 GOPCQ9HD26 462 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 CLIP2Q9UDT6 1046 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 NEDD4P46934 1319 aa12.79□□□□□ -0.36
ATG4B-219ENST00000479941 LAMA4Q16363 1823 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L15C9J2P7 530 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L13C9JLJ4 530 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms