RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 SCRN1Q12765 414 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 C12orf60Q5U649 245 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 HHIPL2Q6UWX4 724 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 SYNE3Q6ZMZ3 975 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 NFXL1Q6ZNB6 911 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 NKX2-3Q8TAU0 364 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 IGDCC4Q8TDY8 1250 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 TEKT1Q969V4 418 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 LLPHQ9BRT6 129 aaKnown RBP7.18□□□□□ -1.26
LRRC47-203ENST00000479239 UBAC1Q9BSL1 405 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 VPS33BQ9H267 617 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 ZNF277Q9NRM2 450 aaPredicted RBP7.18□□□□□ -1.26
LRRC47-203ENST00000479239 USP40Q9NVE5 1235 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 SAP30BPQ9UHR5 308 aaKnown RBP7.18□□□□□ -1.26
LRRC47-203ENST00000479239 BRPF3Q9ULD4 1205 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 ZDHHC9Q9Y397 364 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 DAGLAQ9Y4D2 1042 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 PCDHGA4Q9Y5G9 962 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 SNED1Q8TER0 1413 aa7.18□□□□□ -1.26
LRRC47-203ENST00000479239 MYH7P12883 1935 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 CCDC69A6NI79 296 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 STX6O43752 255 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 ORC4O43929 436 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 PRDM1O75626 825 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 BAG4O95429 457 aaKnown RBP7.17□□□□□ -1.26
LRRC47-203ENST00000479239 BRD1O95696 1058 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 FGRP09769 529 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 POTEIP0CG38 1075 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 POTEJP0CG39 1038 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 PDIA4P13667 645 aaKnown RBP7.17□□□□□ -1.26
LRRC47-203ENST00000479239 SYT1P21579 422 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 LIFRP42702 1097 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 CRKP46108 304 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 HDLBPQ00341 1268 aaKnown RBP7.17□□□□□ -1.26
LRRC47-203ENST00000479239 PDE4BQ07343 736 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 WTAPQ15007 396 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 SKIV2LQ15477 1246 aaKnown RBP7.17□□□□□ -1.26
LRRC47-203ENST00000479239 LARP1BQ659C4 914 aaKnown RBP7.17□□□□□ -1.26
LRRC47-203ENST00000479239 RAB11FIP4Q86YS3 637 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 KIAA0825Q8IV33 1275 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 TMTC2Q8N394 836 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 FAM184AQ8NB25 1140 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 DDX11Q96FC9 970 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 ZKSCAN3Q9BRR0 538 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 MTA3Q9BTC8 594 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 BEGAINQ9BUH8 593 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 MRIQ9BWK5 157 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 LY9Q9HBG7 655 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 NCOA5Q9HCD5 579 aaKnown RBP7.17□□□□□ -1.26
LRRC47-203ENST00000479239 HPS5Q9UPZ3 1129 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.17□□□□□ -1.26
LRRC47-203ENST00000479239 SLC12A7Q9Y666 1083 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 SLX4Q8IY92 1834 aa7.17□□□□□ -1.26
LRRC47-203ENST00000479239 MYO5AQ9Y4I1 1855 aaKnown RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 PTPDC1A2A3K4 754 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 A6NJR5 290 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 DDX11L8A8MPP1 907 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 YDJCA8MPS7 323 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 GOLGA6L22H0YM25 854 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 CPLX1O14810 134 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 ZBTB43O43298 467 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 JAK2O60674 1132 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 ZSCAN22P10073 491 aaPredicted RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 IARSP41252 1262 aaKnown RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 NT5C2P49902 561 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 METAP2P50579 478 aaKnown RBP eCLIP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 RBM5P52756 815 aaKnown RBP eCLIP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 HMGN5P82970 282 aaKnown RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 PICALMQ13492 652 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 SLC4A8Q2Y0W8 1093 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 PRPF38BQ5VTL8 546 aaKnown RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 APOBEC3HQ6NTF7 200 aaKnown RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 CDC42EP5Q6NZY7 148 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 CLEC17AQ6ZS10 378 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 METTL3Q86U44 580 aaKnown RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 SGMS1Q86VZ5 419 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 IQCA1Q86XH1 822 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 NIM1KQ8IY84 436 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 NSUN7Q8NE18 718 aaKnown RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 SMARCC2Q8TAQ2 1214 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 NLRP7Q8WX94 980 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 ZDHHC15Q96MV8 337 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 ZSCAN10Q96SZ4 725 aaPredicted RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 TAOK3Q9H2K8 898 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 MKNK2Q9HBH9 465 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 ZNF287Q9HBT7 754 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 SENP2Q9HC62 589 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 ZNRF3Q9ULT6 936 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 MTMR6Q9Y217 621 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 KIF3AQ9Y496 699 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 DICER1Q9UPY3 1922 aaKnown RBP7.16□□□□□ -1.26
LRRC47-203ENST00000479239 FLT1P17948 1338 aa7.16□□□□□ -1.26
LRRC47-203ENST00000479239 DLEC1Q9Y238 1755 aa7.15□□□□□ -1.26
LRRC47-203ENST00000479239 VPS37CA5D8V6 355 aaPredicted RBP7.15□□□□□ -1.26
LRRC47-203ENST00000479239 TSPY2A6NKD2 308 aa7.15□□□□□ -1.26
LRRC47-203ENST00000479239 GOLGA8AA7E2F4 631 aa7.15□□□□□ -1.26
LRRC47-203ENST00000479239 H3BQV1 296 aa7.15□□□□□ -1.26
LRRC47-203ENST00000479239 WDHD1O75717 1129 aaPredicted RBP7.15□□□□□ -1.26
LRRC47-203ENST00000479239 RAD17O75943 681 aa7.15□□□□□ -1.26
LRRC47-203ENST00000479239 CDKL5O76039 1030 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms