RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 DNM1LO00429 736 aa21.06■□□□□ 0.96
VIM-204ENST00000478746 RTP1P59025 263 aa21.06■□□□□ 0.96
VIM-204ENST00000478746 TTC39AQ5SRH9 613 aa21.06■□□□□ 0.96
VIM-204ENST00000478746 CATSPERGQ6ZRH7 1159 aa21.06■□□□□ 0.96
VIM-204ENST00000478746 ADGRA1Q86SQ6 560 aa21.06■□□□□ 0.96
VIM-204ENST00000478746 TRMT2AQ8IZ69 625 aaKnown RBP21.06■□□□□ 0.96
VIM-204ENST00000478746 C12orf42Q96LP6 360 aa21.06■□□□□ 0.96
VIM-204ENST00000478746 CDX2Q99626 313 aaPredicted RBP21.06■□□□□ 0.96
VIM-204ENST00000478746 FEZ1Q99689 392 aa21.06■□□□□ 0.96
VIM-204ENST00000478746 SEMA6BQ9H3T3 888 aa21.05■□□□□ 0.96
VIM-204ENST00000478746 ATP11BQ9Y2G3 1177 aa21.05■□□□□ 0.96
VIM-204ENST00000478746 FRMPD3Q5JV73 1810 aa21.04■□□□□ 0.96
VIM-204ENST00000478746 HOXC6P09630 235 aa21.04■□□□□ 0.96
VIM-204ENST00000478746 CYP2C19P33261 490 aa21.04■□□□□ 0.96
VIM-204ENST00000478746 USP14P54578 494 aa21.04■□□□□ 0.96
VIM-204ENST00000478746 SHHQ15465 462 aa21.04■□□□□ 0.96
VIM-204ENST00000478746 CCDC158Q5M9N0 1113 aa21.04■□□□□ 0.96
VIM-204ENST00000478746 ARRDC4Q8NCT1 418 aa21.04■□□□□ 0.96
VIM-204ENST00000478746 NPLOC4Q8TAT6 608 aa21.04■□□□□ 0.96
VIM-204ENST00000478746 CYP2E1P05181 493 aaPredicted RBP21.03■□□□□ 0.96
VIM-204ENST00000478746 GRB14Q14449 540 aa21.03■□□□□ 0.96
VIM-204ENST00000478746 GJC2Q5T442 439 aaPredicted RBP21.03■□□□□ 0.96
VIM-204ENST00000478746 MAFAQ8NHW3 353 aaPredicted RBP21.03■□□□□ 0.96
VIM-204ENST00000478746 ARHGAP45Q92619 1136 aa21.03■□□□□ 0.96
VIM-204ENST00000478746 BTBD7Q9P203 1132 aa21.03■□□□□ 0.96
VIM-204ENST00000478746 CDK5RAP2Q96SN8 1893 aa21.03■□□□□ 0.96
VIM-204ENST00000478746 GNAI2P04899 355 aa21.02■□□□□ 0.96
VIM-204ENST00000478746 DYNLL1P63167 89 aaKnown RBP21.02■□□□□ 0.96
VIM-204ENST00000478746 RAB3GAP1Q15042 981 aa21.02■□□□□ 0.96
VIM-204ENST00000478746 TATDN1Q6P1N9 297 aa21.02■□□□□ 0.96
VIM-204ENST00000478746 SLC39A5Q6ZMH5 540 aa21.02■□□□□ 0.96
VIM-204ENST00000478746 TRPV1Q8NER1 839 aa21.02■□□□□ 0.96
VIM-204ENST00000478746 MAST2Q6P0Q8 1798 aa21.02■□□□□ 0.96
VIM-204ENST00000478746 EYSQ5T1H1 3165 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 PNMA6EA0A0J9YXQ4 647 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 IGSF3O75054 1194 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 LBX2Q6XYB7 198 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 DPP9Q86TI2 863 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 KIAA1683Q9H0B3 1180 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 GPR108Q9NPR9 543 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 VCANP13611 3396 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 FOCADQ5VW36 1801 aa21.01■□□□□ 0.95
VIM-204ENST00000478746 ZNF316A6NFI3 1004 aaPredicted RBP21■□□□□ 0.95
VIM-204ENST00000478746 KBTBD13C9JR72 458 aa21■□□□□ 0.95
VIM-204ENST00000478746 VCAM1P19320 739 aa21■□□□□ 0.95
VIM-204ENST00000478746 CYP7A1P22680 504 aa21■□□□□ 0.95
VIM-204ENST00000478746 USP5P45974 858 aa21■□□□□ 0.95
VIM-204ENST00000478746 RARSP54136 660 aaKnown RBP21■□□□□ 0.95
VIM-204ENST00000478746 CERKLQ49MI3 558 aaPredicted RBP21■□□□□ 0.95
VIM-204ENST00000478746 C9orf50Q5SZB4 431 aa21■□□□□ 0.95
VIM-204ENST00000478746 ACER1Q8TDN7 264 aa21■□□□□ 0.95
VIM-204ENST00000478746 BADQ92934 168 aa21■□□□□ 0.95
VIM-204ENST00000478746 DBNDD2Q9BQY9 259 aa21■□□□□ 0.95
VIM-204ENST00000478746 PRDM5Q9NQX1 630 aaPredicted RBP21■□□□□ 0.95
VIM-204ENST00000478746 PRUNE2Q8WUY3 3088 aa20.99■□□□□ 0.95
VIM-204ENST00000478746 CYBAP13498 195 aa20.99■□□□□ 0.95
VIM-204ENST00000478746 ZAP70P43403 619 aa20.99■□□□□ 0.95
VIM-204ENST00000478746 ABCB5Q2M3G0 1257 aa20.99■□□□□ 0.95
VIM-204ENST00000478746 TNNI3KQ59H18 835 aa20.99■□□□□ 0.95
VIM-204ENST00000478746 RPAP3Q9H6T3 665 aaPredicted RBP20.99■□□□□ 0.95
VIM-204ENST00000478746 CABP5Q9NP86 173 aa20.99■□□□□ 0.95
VIM-204ENST00000478746 PIH1D3Q9NQM4 214 aaKnown RBP20.99■□□□□ 0.95
VIM-204ENST00000478746 SERPINB13Q9UIV8 391 aa20.99■□□□□ 0.95
VIM-204ENST00000478746 FPGT-TNNI3KV9GXZ4 949 aa20.99■□□□□ 0.95
VIM-204ENST00000478746 SPDYE16A6NNV3 312 aaPredicted RBP20.98■□□□□ 0.95
VIM-204ENST00000478746 STRNO43815 780 aa20.98■□□□□ 0.95
VIM-204ENST00000478746 IGHA2P01877 340 aa20.98■□□□□ 0.95
VIM-204ENST00000478746 MYCNP04198 464 aaPredicted RBP20.98■□□□□ 0.95
VIM-204ENST00000478746 SMAD3P84022 425 aaKnown RBP20.98■□□□□ 0.95
VIM-204ENST00000478746 ANO1Q5XXA6 986 aa20.98■□□□□ 0.95
VIM-204ENST00000478746 MYLIPQ8WY64 445 aa20.98■□□□□ 0.95
VIM-204ENST00000478746 OLFML2BQ68BL8 750 aa20.97■□□□□ 0.95
VIM-204ENST00000478746 TTC6Q86TZ1 520 aa20.97■□□□□ 0.95
VIM-204ENST00000478746 CERS3Q8IU89 383 aa20.97■□□□□ 0.95
VIM-204ENST00000478746 ZNF512BQ96KM6 892 aaPredicted RBP20.97■□□□□ 0.95
VIM-204ENST00000478746 EHD4Q9H223 541 aa20.97■□□□□ 0.95
VIM-204ENST00000478746 PRDM6Q9NQX0 595 aa20.97■□□□□ 0.95
VIM-204ENST00000478746 HOXC10Q9NYD6 342 aa20.97■□□□□ 0.95
VIM-204ENST00000478746 MYH1P12882 1939 aa20.97■□□□□ 0.95
VIM-204ENST00000478746 LTBP2Q14767 1821 aa20.97■□□□□ 0.95
VIM-204ENST00000478746 MYO5AQ9Y4I1 1855 aaKnown RBP20.96■□□□□ 0.95
VIM-204ENST00000478746 RLFQ13129 1914 aa20.96■□□□□ 0.95
VIM-204ENST00000478746 SEPT4O43236 478 aa20.96■□□□□ 0.95
VIM-204ENST00000478746 ADORA2AP29274 412 aa20.96■□□□□ 0.95
VIM-204ENST00000478746 OS9Q13438 667 aaPredicted RBP20.96■□□□□ 0.95
VIM-204ENST00000478746 TRIM60Q495X7 471 aa20.96■□□□□ 0.95
VIM-204ENST00000478746 MIGA1Q8NAN2 632 aa20.96■□□□□ 0.95
VIM-204ENST00000478746 TTYH1Q9H313 450 aaPredicted RBP20.96■□□□□ 0.95
VIM-204ENST00000478746 IPO8O15397 1037 aaKnown RBP20.95■□□□□ 0.94
VIM-204ENST00000478746 IDH1O75874 414 aaKnown RBP20.95■□□□□ 0.94
VIM-204ENST00000478746 ADCYAP1R1P41586 468 aa20.95■□□□□ 0.94
VIM-204ENST00000478746 COG2Q14746 738 aa20.95■□□□□ 0.94
VIM-204ENST00000478746 SYMPKQ92797 1274 aaKnown RBP20.95■□□□□ 0.94
VIM-204ENST00000478746 MOV10L1Q9BXT6 1211 aaKnown RBP20.95■□□□□ 0.94
VIM-204ENST00000478746 TRIM43BA6NCK2 446 aa20.94■□□□□ 0.94
VIM-204ENST00000478746 FOSL2P15408 326 aa20.94■□□□□ 0.94
VIM-204ENST00000478746 SNX17Q15036 470 aa20.94■□□□□ 0.94
VIM-204ENST00000478746 SH3RF1Q7Z6J0 888 aa20.94■□□□□ 0.94
VIM-204ENST00000478746 FERMT2Q96AC1 680 aa20.94■□□□□ 0.94
VIM-204ENST00000478746 TRIM43Q96BQ3 446 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms