RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 OSCP1Q8WVF1 389 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 PRPF18Q99633 342 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 SCG2P13521 617 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 JADE1Q6IE81 842 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 CXorf38Q8TB03 319 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 PSMD12O00232 456 aaPredicted RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 UBA7P41226 1012 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 HNRNPH2P55795 449 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 ABCE1P61221 599 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 KRT77Q7Z794 578 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 RUNDC1Q96C34 613 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 NAPBQ9H115 298 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 KDM4CQ9H3R0 1056 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 SLC12A7Q9Y666 1083 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 SMARCA2P51531 1590 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 MAP3K15Q6ZN16 1313 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 PIK3CDO00329 1044 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 PSMA7O14818 248 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 NPM3O75607 178 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 IDEP14735 1019 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 CCDC183Q5T5S1 534 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 OTUD7BQ6GQQ9 843 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 ABHD8Q96I13 439 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 TRIM31Q9BZY9 425 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 DDX19AQ9NUU7 478 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 INTUQ9ULD6 942 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 PRR23D1E9PI22 279 aaPredicted RBP5.96□□□□□ -1.45
USF3-202ENST00000478658 MTSS1O43312 755 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 PRR23D2P0DMB1 279 aaPredicted RBP5.96□□□□□ -1.45
USF3-202ENST00000478658 ZNF75DP51815 510 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 CCDC15Q0P6D6 951 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 PABPC4Q13310 644 aaKnown RBP eCLIP5.96□□□□□ -1.45
USF3-202ENST00000478658 PLEKHM3Q6ZWE6 761 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 SMC5Q8IY18 1101 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 EXD1Q8NHP7 514 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 CRELD1Q96HD1 420 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 SERPINI1Q99574 410 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 SPZ1Q9BXG8 430 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 FAM129AQ9BZQ8 928 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 NEK6Q9HC98 313 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 PHLPP2Q6ZVD8 1323 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 CUX2O14529 1486 aa5.96□□□□□ -1.45
USF3-202ENST00000478658 FAM47E-STBD1D6RA91 191 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 APOA1P02647 267 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 NPR1P16066 1061 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 CABP4P57796 275 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 KRT33BQ14525 404 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 TMTC4Q5T4D3 741 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 GGT6Q6P531 493 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 CEP57Q86XR8 500 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 CDKL2Q92772 493 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 N4BP2L2Q92802 583 aaPredicted RBP5.96□□□□□ -1.46
USF3-202ENST00000478658 PRIMPOLQ96LW4 560 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 OLFM1Q99784 485 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 EPC1Q9H2F5 836 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 TUFT1Q9NNX1 390 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.96□□□□□ -1.46
USF3-202ENST00000478658 RGL1Q9NZL6 768 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 AIPL1Q9NZN9 384 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 PLEKHH2Q8IVE3 1493 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 CHEK2O96017 543 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 GNAT2P19087 354 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 KRT20P35900 424 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 RASA3Q14644 834 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 DIXDC1Q155Q3 683 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 PHKG1Q16816 387 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 NUGGCQ68CJ6 796 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 TXNDC2Q86VQ3 553 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 NR1H4Q96RI1 486 aaPredicted RBP5.96□□□□□ -1.46
USF3-202ENST00000478658 JPH2Q9BR39 696 aaPredicted RBP5.96□□□□□ -1.46
USF3-202ENST00000478658 ING3Q9NXR8 418 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 SERTAD1Q9UHV2 236 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 ZBTB1Q9Y2K1 713 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 UBE4BO95155 1302 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 SUN1O94901 812 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 S100GP29377 79 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 GCKP35557 465 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 STX1BP61266 288 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 TPTE2Q6XPS3 522 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 ASZ1Q8WWH4 475 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 SMARCAD1Q9H4L7 1026 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 FAM96AQ9H5X1 160 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 YY1AP1Q9H869 796 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 RTL9Q8NET4 1388 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 CARSP49589 748 aaKnown RBP5.96□□□□□ -1.46
USF3-202ENST00000478658 STRN3Q13033 797 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 NCAPG2Q86XI2 1143 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 SH3GL1Q99961 368 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 NBPF3Q9H094 633 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 KLHL31Q9H511 634 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 UVRAGQ9P2Y5 699 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 GOLGA8KD6RF30 607 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 POLR2DO15514 142 aaKnown RBP5.96□□□□□ -1.46
USF3-202ENST00000478658 PLIN1O60240 522 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 SNX4O95219 450 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 GSTA1P08263 222 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 GSTA2P09210 222 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 IBSPP21815 317 aaPredicted RBP5.96□□□□□ -1.46
USF3-202ENST00000478658 CIITAP33076 1130 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 SERPINB6P35237 376 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms