RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 CAPN15O75808 1086 aa26.71■■□□□ 1.87
SF1-214ENST00000477596 MCMDC2Q4G0Z9 681 aa26.71■■□□□ 1.87
SF1-214ENST00000477596 NACAP1Q9BZK3 213 aa26.71■■□□□ 1.87
SF1-214ENST00000477596 TMOD4Q9NZQ9 345 aa26.71■■□□□ 1.87
SF1-214ENST00000477596 TAOK2Q9UL54 1235 aa26.71■■□□□ 1.87
SF1-214ENST00000477596 TMEM179Q6ZVK1 233 aa26.7■■□□□ 1.86
SF1-214ENST00000477596 OTOP1Q7RTM1 612 aa26.7■■□□□ 1.86
SF1-214ENST00000477596 TRIM17Q9Y577 477 aa26.7■■□□□ 1.86
SF1-214ENST00000477596 GREB1LQ9C091 1923 aaPredicted RBP26.7■■□□□ 1.86
SF1-214ENST00000477596 A0A1W2PRG0 241 aa26.69■■□□□ 1.86
SF1-214ENST00000477596 C19orf81C9J6K1 198 aa26.69■■□□□ 1.86
SF1-214ENST00000477596 PRDM1O75626 825 aa26.69■■□□□ 1.86
SF1-214ENST00000477596 BCRP11274 1271 aa26.69■■□□□ 1.86
SF1-214ENST00000477596 RASA1P20936 1047 aa26.69■■□□□ 1.86
SF1-214ENST00000477596 IFFO2Q5TF58 517 aa26.69■■□□□ 1.86
SF1-214ENST00000477596 USP17L2Q6R6M4 530 aa26.69■■□□□ 1.86
SF1-214ENST00000477596 CCDC171Q6TFL3 1326 aa26.68■■□□□ 1.86
SF1-214ENST00000477596 CTGFP29279 349 aa26.68■■□□□ 1.86
SF1-214ENST00000477596 CWC27Q6UX04 472 aaKnown RBP26.68■■□□□ 1.86
SF1-214ENST00000477596 TICAM2Q86XR7 235 aa26.68■■□□□ 1.86
SF1-214ENST00000477596 SMCR8Q8TEV9 937 aaPredicted RBP26.68■■□□□ 1.86
SF1-214ENST00000477596 ASCC2Q9H1I8 757 aaPredicted RBP26.68■■□□□ 1.86
SF1-214ENST00000477596 DIAPH3Q9NSV4 1193 aa26.68■■□□□ 1.86
SF1-214ENST00000477596 HTTP42858 3142 aa26.68■■□□□ 1.86
SF1-214ENST00000477596 LACTBP83111 547 aaPredicted RBP26.67■■□□□ 1.86
SF1-214ENST00000477596 PPARAQ07869 468 aa26.67■■□□□ 1.86
SF1-214ENST00000477596 SIAH1Q8IUQ4 282 aa26.67■■□□□ 1.86
SF1-214ENST00000477596 CCDC17Q96LX7 622 aa26.67■■□□□ 1.86
SF1-214ENST00000477596 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.67■■□□□ 1.86
SF1-214ENST00000477596 KIAA1683Q9H0B3 1180 aa26.67■■□□□ 1.86
SF1-214ENST00000477596 PNMA3Q9UL41 463 aa26.67■■□□□ 1.86
SF1-214ENST00000477596 ICA1Q05084 483 aa26.66■■□□□ 1.86
SF1-214ENST00000477596 CENPQQ7L2Z9 268 aaPredicted RBP26.66■■□□□ 1.86
SF1-214ENST00000477596 C12orf42Q96LP6 360 aa26.66■■□□□ 1.86
SF1-214ENST00000477596 EFCC1Q9HA90 598 aa26.66■■□□□ 1.86
SF1-214ENST00000477596 MKNK2Q9HBH9 465 aa26.66■■□□□ 1.86
SF1-214ENST00000477596 HSPD1P10809 573 aaKnown RBP26.65■■□□□ 1.86
SF1-214ENST00000477596 CTDSPL2Q05D32 466 aa26.65■■□□□ 1.86
SF1-214ENST00000477596 PABPC4Q13310 644 aaKnown RBP eCLIP26.65■■□□□ 1.861e-9■□□□□ 8.7
SF1-214ENST00000477596 IL25Q9H293 177 aa26.65■■□□□ 1.86
SF1-214ENST00000477596 TACC3Q9Y6A5 838 aa26.65■■□□□ 1.86
SF1-214ENST00000477596 PEX10O60683 326 aa26.64■■□□□ 1.86
SF1-214ENST00000477596 VCAM1P19320 739 aa26.64■■□□□ 1.86
SF1-214ENST00000477596 OSBPP22059 807 aa26.64■■□□□ 1.86
SF1-214ENST00000477596 IRX3P78415 501 aaPredicted RBP26.64■■□□□ 1.86
SF1-214ENST00000477596 KIAA1755Q5JYT7 1200 aa26.64■■□□□ 1.86
SF1-214ENST00000477596 ANKRD13CQ8N6S4 541 aa26.64■■□□□ 1.86
SF1-214ENST00000477596 HOXA7P31268 230 aaPredicted RBP26.63■■□□□ 1.85
SF1-214ENST00000477596 USP14P54578 494 aa26.63■■□□□ 1.85
SF1-214ENST00000477596 FBXO46Q6PJ61 603 aaPredicted RBP26.63■■□□□ 1.85
SF1-214ENST00000477596 INCENPQ9NQS7 918 aa26.63■■□□□ 1.85
SF1-214ENST00000477596 HPS5Q9UPZ3 1129 aa26.63■■□□□ 1.85
SF1-214ENST00000477596 FGAP02671 866 aa26.62■■□□□ 1.85
SF1-214ENST00000477596 EEF2P13639 858 aaKnown RBP26.62■■□□□ 1.85
SF1-214ENST00000477596 ATP2B2Q01814 1243 aa26.62■■□□□ 1.85
SF1-214ENST00000477596 ALX1Q15699 326 aa26.62■■□□□ 1.85
SF1-214ENST00000477596 PKN2Q16513 984 aaKnown RBP26.62■■□□□ 1.85
SF1-214ENST00000477596 TRIM47Q96LD4 638 aa26.62■■□□□ 1.85
SF1-214ENST00000477596 P2RX7Q99572 595 aaKnown RBP26.62■■□□□ 1.85
SF1-214ENST00000477596 MGAMO43451 1857 aa26.62■■□□□ 1.85
SF1-214ENST00000477596 HIP1O00291 1037 aa26.61■■□□□ 1.85
SF1-214ENST00000477596 NEFLP07196 543 aa26.61■■□□□ 1.85
SF1-214ENST00000477596 PSMC4P43686 418 aa26.61■■□□□ 1.85
SF1-214ENST00000477596 KIF22Q14807 665 aa26.61■■□□□ 1.85
SF1-214ENST00000477596 ARHGEF10LQ9HCE6 1279 aa26.61■■□□□ 1.85
SF1-214ENST00000477596 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.61■■□□□ 1.85
SF1-214ENST00000477596 HERVK_113P62684 666 aa26.6■■□□□ 1.85
SF1-214ENST00000477596 POTEEQ6S8J3 1075 aa26.6■■□□□ 1.85
SF1-214ENST00000477596 CCDC136Q96JN2 1154 aa26.6■■□□□ 1.85
SF1-214ENST00000477596 RPAP3Q9H6T3 665 aaPredicted RBP26.6■■□□□ 1.85
SF1-214ENST00000477596 KANSL2Q9H9L4 492 aa26.6■■□□□ 1.85
SF1-214ENST00000477596 PTPN22Q9Y2R2 807 aa26.6■■□□□ 1.85
SF1-214ENST00000477596 IGKV6D-41A0A0C4DH26 115 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 CCDC85CA6NKD9 419 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 HAND2P61296 217 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 PDE4BQ07343 736 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 FAM47AQ5JRC9 791 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 SPICE1Q8N0Z3 855 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 TXNRD2Q9NNW7 524 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 TMX2Q9Y320 296 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 ZMYM6O95789 1325 aa26.59■■□□□ 1.85
SF1-214ENST00000477596 USP17L15C9J2P7 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 USP17L13C9JLJ4 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 USP17L11C9JVI0 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 USP17L18D6R9N7 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 USP17L22D6RA61 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 USP17L17D6RBQ6 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 USP17L19D6RCP7 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 USP17L20D6RJB6 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 SLC3A2P08195 630 aaKnown RBP26.58■■□□□ 1.85
SF1-214ENST00000477596 USP17L24Q0WX57 530 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 FAM110CQ1W6H9 321 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 ZNF444Q8N0Y2 327 aaPredicted RBP26.58■■□□□ 1.85
SF1-214ENST00000477596 NBPF3Q9H094 633 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 ANAPC4Q9UJX5 808 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 PTCH2Q9Y6C5 1203 aa26.58■■□□□ 1.85
SF1-214ENST00000477596 LAMA4Q16363 1823 aa26.58■■□□□ 1.84
SF1-214ENST00000477596 PLIN4Q96Q06 1357 aa26.58■■□□□ 1.84
SF1-214ENST00000477596 FMNL1O95466 1100 aaPredicted RBP26.57■■□□□ 1.84
SF1-214ENST00000477596 CENPBP07199 599 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms