RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 FXR1P51114 621 aaKnown RBP eCLIP15.52■□□□□ 0.08
HDAC1-206ENST00000476391 G3BP1Q13283 466 aaKnown RBP eCLIP15.52■□□□□ 0.081e-8■□□□□ 10.1
HDAC1-206ENST00000476391 NNTQ13423 1086 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 POSTNQ15063 836 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 PTPAQ15257 358 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 PDCD2Q16342 344 aaPredicted RBP15.52■□□□□ 0.08
HDAC1-206ENST00000476391 OR8K1Q8NGG5 319 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 CAVIN3Q969G5 261 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 BORCS6Q96GS4 357 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 RNPC3Q96LT9 517 aaKnown RBP15.52■□□□□ 0.08
HDAC1-206ENST00000476391 ABHD10Q9NUJ1 306 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 HDAC6Q9UBN7 1215 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 ALKQ9UM73 1620 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 MAP3K19Q56UN5 1328 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 ANKRD18BA2A2Z9 1011 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 RPSAP08865 295 aaKnown RBP15.52■□□□□ 0.07
HDAC1-206ENST00000476391 HDLBPQ00341 1268 aaKnown RBP15.52■□□□□ 0.07
HDAC1-206ENST00000476391 ITIH3Q06033 890 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 SPECC1Q5M775 1068 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 KIRREL3Q8IZU9 778 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 MMGT1Q8N4V1 131 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 RASSF8Q8NHQ8 419 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 P3H4Q92791 437 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 JAKMIP2Q96AA8 810 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 MED15Q96RN5 788 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 EBF2Q9HAK2 575 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 GUCA1BQ9UMX6 200 aa15.52■□□□□ 0.07
HDAC1-206ENST00000476391 AKAP12Q02952 1782 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 ENC1O14682 589 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 ATP1A2P50993 1020 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 RPS6KA3P51812 740 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 TRIM14Q14142 442 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 SLC9C2Q5TAH2 1124 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 ZNF662Q6ZS27 426 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 C1orf131Q8NDD1 294 aaKnown RBP15.51■□□□□ 0.07
HDAC1-206ENST00000476391 CAGE1Q8TC20 777 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 RRP36Q96EU6 259 aaKnown RBP15.51■□□□□ 0.07
HDAC1-206ENST00000476391 TLR7Q9NYK1 1049 aaKnown RBP15.51■□□□□ 0.07
HDAC1-206ENST00000476391 ZNF609O15014 1411 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 KDRP35968 1356 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 ANO9A1A5B4 782 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 SPATA1Q5VX52 437 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 CRELD2Q6UXH1 353 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-206ENST00000476391 PARD3BQ8TEW8 1205 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 CCDC47Q96A33 483 aaKnown RBP15.51■□□□□ 0.07
HDAC1-206ENST00000476391 SLF1Q9BQI6 1058 aa15.51■□□□□ 0.07
HDAC1-206ENST00000476391 RIMS1Q86UR5 1692 aaKnown RBP15.5■□□□□ 0.07
HDAC1-206ENST00000476391 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
HDAC1-206ENST00000476391 PPP1R12BO60237 982 aaPredicted RBP15.5■□□□□ 0.07
HDAC1-206ENST00000476391 MDH1P40925 334 aaKnown RBP15.5■□□□□ 0.07
HDAC1-206ENST00000476391 LACTB2Q53H82 288 aaPredicted RBP15.5■□□□□ 0.07
HDAC1-206ENST00000476391 ANKRD20A8PQ5CZ79 823 aa15.5■□□□□ 0.07
HDAC1-206ENST00000476391 GGT6Q6P531 493 aa15.5■□□□□ 0.07
HDAC1-206ENST00000476391 TICAM2Q86XR7 235 aa15.5■□□□□ 0.07
HDAC1-206ENST00000476391 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
HDAC1-206ENST00000476391 CAPZA3Q96KX2 299 aa15.5■□□□□ 0.07
HDAC1-206ENST00000476391 HAUS2Q9NVX0 235 aa15.5■□□□□ 0.07
HDAC1-206ENST00000476391 SRGAP2O75044 1071 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 TNFRSF8P28908 595 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 GUCY1A3Q02108 690 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 KCNB1Q14721 858 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 SLC5A9Q2M3M2 681 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 EPN1Q9Y6I3 576 aaPredicted RBP15.49■□□□□ 0.07
HDAC1-206ENST00000476391 PEAK1Q9H792 1746 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 AP1G2O75843 785 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 NDUFA10O95299 355 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 SSBP05455 408 aaKnown RBP eCLIP15.49■□□□□ 0.07
HDAC1-206ENST00000476391 NR1D1P20393 614 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 PEX19P40855 299 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 CAPRIN2Q6IMN6 1127 aaKnown RBP15.49■□□□□ 0.07
HDAC1-206ENST00000476391 PPP4R3AQ6IN85 833 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 CYFIP2Q96F07 1278 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 OSBPL7Q9BZF2 842 aa15.49■□□□□ 0.07
HDAC1-206ENST00000476391 CDKAL1Q5VV42 579 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 CCDC129Q6ZRS4 1044 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 BZW1Q7L1Q6 419 aaKnown RBP15.48■□□□□ 0.07
HDAC1-206ENST00000476391 ZNF572Q7Z3I7 529 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-206ENST00000476391 SH2D3CQ8N5H7 860 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 TSEN2Q8NCE0 465 aaKnown RBP15.48■□□□□ 0.07
HDAC1-206ENST00000476391 ZIM3Q96PE6 472 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 SPAG5Q96R06 1193 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 MAP3K14Q99558 947 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 DSCC1Q9BVC3 393 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 TRPC6Q9Y210 931 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-206ENST00000476391 MRC1P22897 1456 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 E7EWF7 191 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 DNM1LO00429 736 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 FOXN1O15353 648 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 DNAJC8O75937 253 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-206ENST00000476391 CD302Q8IX05 232 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 HOMEZQ8IX15 550 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 CCHCR1Q8TD31 782 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 ZBTB10Q96DT7 871 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 REXO2Q9Y3B8 237 aaKnown RBP15.48■□□□□ 0.07
HDAC1-206ENST00000476391 WDR17Q8IZU2 1322 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
HDAC1-206ENST00000476391 GNAT3A8MTJ3 354 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 LIN7AO14910 233 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 SEC24CP53992 1094 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms