RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 EPB41L4AQ9HCS5 686 aaPredicted RBP13.86□□□□□ -0.19
BRD9-203ENST00000475706 HELLSQ9NRZ9 838 aa13.86□□□□□ -0.19
BRD9-203ENST00000475706 PDE4AP27815 886 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 GUCY1A2P33402 732 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 IRX3P78415 501 aaPredicted RBP13.85□□□□□ -0.19
BRD9-203ENST00000475706 LACTBP83111 547 aaPredicted RBP13.85□□□□□ -0.19
BRD9-203ENST00000475706 CAP1Q01518 475 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 NMIQ13287 307 aaPredicted RBP13.85□□□□□ -0.19
BRD9-203ENST00000475706 ACER1Q8TDN7 264 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 CCDC17Q96LX7 622 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 FAM227BQ96M60 508 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 ARHGAP39Q9C0H5 1083 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 ADGRA2Q96PE1 1338 aa13.85□□□□□ -0.19
BRD9-203ENST00000475706 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 FMNL1O95466 1100 aaPredicted RBP13.84□□□□□ -0.19
BRD9-203ENST00000475706 BCRP11274 1271 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 PSMC4P43686 418 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 USP14P54578 494 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 MCMDC2Q4G0Z9 681 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 TMEM179Q6ZVK1 233 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 CLEC10AQ8IUN9 316 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 ASCC2Q9H1I8 757 aaPredicted RBP13.84□□□□□ -0.19
BRD9-203ENST00000475706 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 HPS5Q9UPZ3 1129 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 PTPN22Q9Y2R2 807 aa13.84□□□□□ -0.19
BRD9-203ENST00000475706 SDSP20132 328 aa13.83□□□□□ -0.2
BRD9-203ENST00000475706 ANKRD13CQ8N6S4 541 aa13.83□□□□□ -0.2
BRD9-203ENST00000475706 P2RX7Q99572 595 aaKnown RBP13.83□□□□□ -0.2
BRD9-203ENST00000475706 ARHGEF10LQ9HCE6 1279 aa13.83□□□□□ -0.2
BRD9-203ENST00000475706 DIAPH3Q9NSV4 1193 aa13.83□□□□□ -0.2
BRD9-203ENST00000475706 PRDM1O75626 825 aa13.82□□□□□ -0.2
BRD9-203ENST00000475706 SLC3A2P08195 630 aaKnown RBP13.82□□□□□ -0.2
BRD9-203ENST00000475706 HOXA7P31268 230 aaPredicted RBP13.82□□□□□ -0.2
BRD9-203ENST00000475706 GCLCP48506 637 aaPredicted RBP13.82□□□□□ -0.2
BRD9-203ENST00000475706 ICA1Q05084 483 aa13.82□□□□□ -0.2
BRD9-203ENST00000475706 PPARAQ07869 468 aa13.82□□□□□ -0.2
BRD9-203ENST00000475706 VPS53Q5VIR6 699 aa13.82□□□□□ -0.2
BRD9-203ENST00000475706 ZNF444Q8N0Y2 327 aaPredicted RBP13.82□□□□□ -0.2
BRD9-203ENST00000475706 KIAA1683Q9H0B3 1180 aa13.82□□□□□ -0.2
BRD9-203ENST00000475706 GREB1LQ9C091 1923 aaPredicted RBP13.82□□□□□ -0.2
BRD9-203ENST00000475706 A0A1W2PRG0 241 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L15C9J2P7 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L13C9JLJ4 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L11C9JVI0 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L18D6R9N7 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L22D6RA61 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L17D6RBQ6 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L19D6RCP7 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L20D6RJB6 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 RAD21O60216 631 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 RASA1P20936 1047 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 HOXD10P28358 340 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 CTGFP29279 349 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 FCGRTP55899 365 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 PDE4BQ07343 736 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 USP17L24Q0WX57 530 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 TTC22Q5TAA0 569 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 CWC27Q6UX04 472 aaKnown RBP13.81□□□□□ -0.2
BRD9-203ENST00000475706 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 ZNF287Q9HBT7 754 aa13.81□□□□□ -0.2
BRD9-203ENST00000475706 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
BRD9-203ENST00000475706 HIP1O00291 1037 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 EEF2P13639 858 aaKnown RBP13.8□□□□□ -0.2
BRD9-203ENST00000475706 VCAM1P19320 739 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 HERVK_113P62684 666 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 CTDSPL2Q05D32 466 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 ZNF589Q86UQ0 364 aaPredicted RBP13.8□□□□□ -0.2
BRD9-203ENST00000475706 PAGR1Q9BTK6 254 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 RPAP3Q9H6T3 665 aaPredicted RBP13.8□□□□□ -0.2
BRD9-203ENST00000475706 SH2D4AQ9H788 454 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 KANSL2Q9H9L4 492 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 PTCH2Q9Y6C5 1203 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 ROBO3Q96MS0 1386 aa13.8□□□□□ -0.2
BRD9-203ENST00000475706 COL11A1P12107 1806 aaPredicted RBP13.79□□□□□ -0.2
BRD9-203ENST00000475706 FOXP2O15409 715 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 PEX10O60683 326 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 GNRH1P01148 92 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 NEFLP07196 543 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 MFAP1P55081 439 aaKnown RBP13.79□□□□□ -0.2
BRD9-203ENST00000475706 FAM110CQ1W6H9 321 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
BRD9-203ENST00000475706 CATSPERGQ6ZRH7 1159 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 SIAH1Q8IUQ4 282 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 SRRDQ9UH36 339 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 MYPNQ86TC9 1320 aa13.79□□□□□ -0.2
BRD9-203ENST00000475706 PARP14Q460N5 1801 aa13.78□□□□□ -0.2
BRD9-203ENST00000475706 RLFQ13129 1914 aa13.78□□□□□ -0.2
BRD9-203ENST00000475706 ZNFX1Q9P2E3 1918 aaKnown RBP13.78□□□□□ -0.2
BRD9-203ENST00000475706 TNPO2O14787 897 aaKnown RBP13.78□□□□□ -0.2
BRD9-203ENST00000475706 FGAP02671 866 aa13.78□□□□□ -0.2
BRD9-203ENST00000475706 TSPY3P0CV98 308 aa13.78□□□□□ -0.2
BRD9-203ENST00000475706 TSPY8P0CW00 308 aa13.78□□□□□ -0.2
BRD9-203ENST00000475706 HSPD1P10809 573 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms