RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 DOC2BQ14184 412 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 HFE2Q6ZVN8 426 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 DMRTC2Q8IXT2 367 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 FMR1NBQ8N0W7 255 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 TTC5Q8N0Z6 440 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 KIF1BPQ96EK5 621 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 SMG9Q9H0W8 520 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 CWC22Q9HCG8 908 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 C9orf78Q9NZ63 289 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 SEPT3Q9UH03 358 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 ISY1Q9ULR0 285 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 MARF1Q9Y4F3 1742 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 ABCC6O95255 1503 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 TMEM88BA6NKF7 163 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 SMARCA5O60264 1052 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 SURF6O75683 361 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 SELPP16109 830 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 MCM4P33991 863 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 XPCQ01831 940 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 MPRIPQ6WCQ1 1025 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 KIAA1211Q6ZU35 1233 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 CNTROBQ8N137 903 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 DTWD1Q8N5C7 304 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 RUFY2Q8WXA3 655 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 LRRC59Q96AG4 307 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 ORAI2Q96SN7 254 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 NLRP2Q9NX02 1062 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 CHPF2Q9P2E5 772 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 EXOC6BQ9Y2D4 811 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 FNDC3AQ9Y2H6 1198 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 LMO7Q8WWI1 1683 aa7.11□□□□□ -1.27
ATPAF1-204ENST00000474020 GOLGA6L3A6NEY3 463 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 ZBTB39O15060 712 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 SRGAP3O43295 1099 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 GHRHP01286 108 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 ANAPC15P60006 121 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 NRG1Q02297 640 aaPredicted RBP7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 KSR2Q6VAB6 950 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 CLASRPQ8N2M8 674 aaKnown RBP7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 GPR152Q8TDT2 470 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 SSH3Q8TE77 659 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 RILPL2Q969X0 211 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 PLD4Q96BZ4 506 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 LENG1Q96BZ8 264 aaPredicted RBP7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 NSUN5Q96P11 429 aaKnown RBP7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 STRCQ7RTU9 1775 aa7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 N4BP2Q86UW6 1770 aaPredicted RBP7.1□□□□□ -1.27
ATPAF1-204ENST00000474020 TMEM94Q12767 1356 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 SRCAPQ6ZRS2 3230 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 TTC41PQ6P2S7 1318 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 PI4KAP2A4QPH2 592 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 J3QW42 95 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 HIP1O00291 1037 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 IFIT2P09913 472 aaKnown RBP7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 ADGRE1Q14246 886 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 PPP1R42Q7Z4L9 355 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 WFDC8Q8IUA0 241 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 C16orf71Q8IYS4 520 aaPredicted RBP7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 IFNL2Q8IZJ0 200 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 PI4KAP1Q8N8J0 262 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 OR13H1Q8NG92 308 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 HELQQ8TDG4 1101 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 USP44Q9H0E7 712 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 RBSNQ9H1K0 784 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 PHAXQ9H814 394 aaKnown RBP7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 LGR6Q9HBX8 967 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 ANO2Q9NQ90 1003 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 STAP2Q9UGK3 403 aa7.09□□□□□ -1.27
ATPAF1-204ENST00000474020 TNS3Q68CZ2 1445 aa7.09□□□□□ -1.28
ATPAF1-204ENST00000474020 KDM3BQ7LBC6 1761 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 TRPM3Q9HCF6 1732 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 GLRX3O76003 335 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 SSFA2P28290 1259 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 ZC3H6P61129 1189 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 MBTPS1Q14703 1052 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 RAB3GAP1Q15042 981 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 BEND3Q5T5X7 828 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 SHISA2Q6UWI4 295 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 FBXO11Q86XK2 927 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 LINS1Q8NG48 757 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 OTUD7AQ8TE49 926 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 ANP32BQ92688 251 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 DDX21Q9NR30 783 aaKnown RBP eCLIP7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 TPSG1Q9NRR2 321 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 DIAPH3Q9NSV4 1193 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 MAP3K2Q9Y2U5 619 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 CAMTA1Q9Y6Y1 1673 aa7.08□□□□□ -1.28
ATPAF1-204ENST00000474020 PNMA6EA0A0J9YXQ4 647 aa7.07□□□□□ -1.28
ATPAF1-204ENST00000474020 G3BP1Q13283 466 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATPAF1-204ENST00000474020 MTX1Q13505 466 aa7.07□□□□□ -1.28
ATPAF1-204ENST00000474020 RSPO4Q2I0M5 234 aaPredicted RBP7.07□□□□□ -1.28
ATPAF1-204ENST00000474020 TNPO1Q92973 898 aaKnown RBP7.07□□□□□ -1.28
ATPAF1-204ENST00000474020 FMNL2Q96PY5 1086 aa7.07□□□□□ -1.28
ATPAF1-204ENST00000474020 SLC52A2Q9HAB3 445 aa7.07□□□□□ -1.28
ATPAF1-204ENST00000474020 LTBP4Q8N2S1 1624 aa7.07□□□□□ -1.28
ATPAF1-204ENST00000474020 SNRPA1P09661 255 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 NCLP19338 710 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 CHMLP26374 656 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 SCNN1AP37088 669 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms