RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TBC1D10BQ4KMP7 808 aaPredicted RBP12.59□□□□□ -0.39
SP140-208ENST00000473711 SYNE3Q6ZMZ3 975 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 SGMS1Q86VZ5 419 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 EFCAB3Q8N7B9 438 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 ENAHQ8N8S7 591 aaPredicted RBP12.59□□□□□ -0.39
SP140-208ENST00000473711 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
SP140-208ENST00000473711 DHX36Q9H2U1 1008 aaKnown RBP12.59□□□□□ -0.39
SP140-208ENST00000473711 SERPINB13Q9UIV8 391 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 SLC12A7Q9Y666 1083 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 TNKSO95271 1327 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 RXRAP19793 462 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 GJB2P29033 226 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 IFIT1BQ5T764 474 aaKnown RBP12.58□□□□□ -0.4
SP140-208ENST00000473711 FOXP4Q8IVH2 680 aaPredicted RBP12.58□□□□□ -0.4
SP140-208ENST00000473711 GPC2Q8N158 579 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 CRACR2BQ8N4Y2 399 aaPredicted RBP12.58□□□□□ -0.4
SP140-208ENST00000473711 FAM151AQ8WW52 585 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 MYL10Q9BUA6 226 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 IL17RBQ9NRM6 502 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 PI4KBQ9UBF8 816 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 SWAP70Q9UH65 585 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 MYH1P12882 1939 aa12.58□□□□□ -0.4
SP140-208ENST00000473711 LAMB1P07942 1786 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 FAM196BA6NMK8 535 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 ZBTB43O43298 467 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 JAK2O60674 1132 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 DDNO94850 711 aaPredicted RBP12.57□□□□□ -0.4
SP140-208ENST00000473711 SHMT1P34896 483 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 NT5C2P49902 561 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 KIF4BQ2VIQ3 1234 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 CCDC178Q5BJE1 867 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 FKBP1CQ5VVH2 108 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 APOA5Q6Q788 366 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 MICU3Q86XE3 530 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 CCDC144CPQ8IYA2 1237 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 NEDD1Q8NHV4 660 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 TRIM34Q9BYJ4 488 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 EHD4Q9H223 541 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 TCP11L1Q9NUJ3 509 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 GPRC5DQ9NZD1 345 aa12.57□□□□□ -0.4
SP140-208ENST00000473711 CNTNAP1P78357 1384 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 FOCADQ5VW36 1801 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 GRIN3BO60391 1043 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 PPFIA3O75145 1194 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
SP140-208ENST00000473711 CTDNEP1O95476 244 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 AKR1B1P15121 316 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 EPS15P42566 896 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 METAP2P50579 478 aaKnown RBP eCLIP12.56□□□□□ -0.4
SP140-208ENST00000473711 NUCB2P80303 420 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 CHMP4CQ96CF2 233 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 DDX11Q96FC9 970 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 CSRNP1Q96S65 589 aa12.56□□□□□ -0.4
SP140-208ENST00000473711 LLPHQ9BRT6 129 aaKnown RBP12.56□□□□□ -0.4
SP140-208ENST00000473711 SCAF8Q9UPN6 1271 aaKnown RBP12.56□□□□□ -0.4
SP140-208ENST00000473711 DDX60LQ5H9U9 1706 aaKnown RBP12.56□□□□□ -0.4
SP140-208ENST00000473711 ASTN2O75129 1339 aaPredicted RBP12.56□□□□□ -0.4
SP140-208ENST00000473711 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
SP140-208ENST00000473711 CPLX1O14810 134 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 DHX16O60231 1041 aaKnown RBP12.55□□□□□ -0.4
SP140-208ENST00000473711 CDC27P30260 824 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 ADD1P35611 737 aaKnown RBP12.55□□□□□ -0.4
SP140-208ENST00000473711 TNNI2P48788 182 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 PKP1Q13835 747 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 FOXD4L5Q5VV16 416 aaPredicted RBP12.55□□□□□ -0.4
SP140-208ENST00000473711 RCSD1Q6JBY9 416 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 CATIPQ7Z7H3 387 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 FAM83AQ86UY5 434 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 NSUN7Q8NE18 718 aaKnown RBP12.55□□□□□ -0.4
SP140-208ENST00000473711 SMARCC2Q8TAQ2 1214 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 FOXD4L4Q8WXT5 416 aaPredicted RBP12.55□□□□□ -0.4
SP140-208ENST00000473711 ANKS1AQ92625 1134 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 TMEM39BQ9GZU3 492 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 FAM217BQ9NTX9 383 aaPredicted RBP12.55□□□□□ -0.4
SP140-208ENST00000473711 SBF1O95248 1867 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 ATRNL1Q5VV63 1379 aa12.55□□□□□ -0.4
SP140-208ENST00000473711 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
SP140-208ENST00000473711 RASA3Q14644 834 aa12.54□□□□□ -0.4
SP140-208ENST00000473711 RAB3GAP1Q15042 981 aa12.54□□□□□ -0.4
SP140-208ENST00000473711 RTN1Q16799 776 aa12.54□□□□□ -0.4
SP140-208ENST00000473711 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
SP140-208ENST00000473711 FANCBQ8NB91 859 aa12.54□□□□□ -0.4
SP140-208ENST00000473711 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
SP140-208ENST00000473711 KAT14Q9H8E8 782 aa12.54□□□□□ -0.4
SP140-208ENST00000473711 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.54□□□□□ -0.4
SP140-208ENST00000473711 HACL1Q9UJ83 578 aa12.54□□□□□ -0.4
SP140-208ENST00000473711 ZDHHC9Q9Y397 364 aa12.54□□□□□ -0.4
SP140-208ENST00000473711 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
SP140-208ENST00000473711 SYT1P21579 422 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms