RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 EYSQ5T1H1 3165 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 A0A1W2PRG0 241 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 SPDYE16A6NNV3 312 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-223ENST00000473345 VCAM1P19320 739 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 CYP7A1P22680 504 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 PTPREP23469 700 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 G3BP1Q13283 466 aaKnown RBP eCLIP11.81□□□□□ -0.52
MCF2L-223ENST00000473345 TTC39AQ5SRH9 613 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 C9orf50Q5SZB4 431 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L2Q6R6M4 530 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 CATSPERGQ6ZRH7 1159 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-223ENST00000473345 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
MCF2L-223ENST00000473345 CCDC8Q9H0W5 538 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-223ENST00000473345 COBLO75128 1261 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 HOXC6P09630 235 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 RLBP1P12271 317 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 CYBAP13498 195 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 ITGB8P26012 769 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 GRB14Q14449 540 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 SLFNL1Q499Z3 407 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
MCF2L-223ENST00000473345 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 SH3RF1Q7Z6J0 888 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 CLEC10AQ8IUN9 316 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 EDC3Q96F86 508 aaKnown RBP11.8□□□□□ -0.52
MCF2L-223ENST00000473345 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
MCF2L-223ENST00000473345 RABGAP1Q9Y3P9 1069 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 DNAH12Q6ZR08 3092 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 RLFQ13129 1914 aa11.8□□□□□ -0.52
MCF2L-223ENST00000473345 LAMA2P24043 3122 aaKnown RBP11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 BAG3O95817 575 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 CYP2D6P10635 497 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 RTP1P59025 263 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 GABPAQ06546 454 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 PDE3AQ14432 1141 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 SHHQ15465 462 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 PRAMEF19Q5SWL8 479 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 GJC2Q5T442 439 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-223ENST00000473345 LBX2Q6XYB7 198 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 SIAH1Q8IUQ4 282 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
MCF2L-223ENST00000473345 SLC44A5Q8NCS7 719 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 ZNF512BQ96KM6 892 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-223ENST00000473345 RIOK1Q9BRS2 568 aaKnown RBP11.79□□□□□ -0.52
MCF2L-223ENST00000473345 KIAA1683Q9H0B3 1180 aa11.79□□□□□ -0.52
MCF2L-223ENST00000473345 TTYH1Q9H313 450 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-223ENST00000473345 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-223ENST00000473345 SPTBN5Q9NRC6 3674 aaKnown RBP11.79□□□□□ -0.52
MCF2L-223ENST00000473345 TRIM43BA6NCK2 446 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 SLC15A5A6NIM6 579 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 CHGBP05060 677 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 PLCG2P16885 1265 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 EPHB4P54760 987 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 SEPT2Q15019 361 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 TRMT44Q8IYL2 757 aaKnown RBP11.78□□□□□ -0.52
MCF2L-223ENST00000473345 MAGEB6Q8N7X4 407 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 FRAT1Q92837 279 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-223ENST00000473345 TRIM43Q96BQ3 446 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-223ENST00000473345 MOV10L1Q9BXT6 1211 aaKnown RBP11.78□□□□□ -0.52
MCF2L-223ENST00000473345 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
MCF2L-223ENST00000473345 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
MCF2L-223ENST00000473345 A0A0G2JMZ2 1700 aa11.77□□□□□ -0.52
MCF2L-223ENST00000473345 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.53
MCF2L-223ENST00000473345 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.53
MCF2L-223ENST00000473345 WDR78Q5VTH9 848 aa11.77□□□□□ -0.53
MCF2L-223ENST00000473345 FAM109BQ6ICB4 259 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-223ENST00000473345 LPAR1Q92633 364 aa11.77□□□□□ -0.53
MCF2L-223ENST00000473345 CDX2Q99626 313 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-223ENST00000473345 FEZ1Q99689 392 aa11.77□□□□□ -0.53
MCF2L-223ENST00000473345 NOL10Q9BSC4 688 aaKnown RBP11.77□□□□□ -0.53
MCF2L-223ENST00000473345 EHD4Q9H223 541 aa11.77□□□□□ -0.53
MCF2L-223ENST00000473345 MYH1P12882 1939 aa11.77□□□□□ -0.53
MCF2L-223ENST00000473345 CUL9Q8IWT3 2517 aa11.77□□□□□ -0.53
MCF2L-223ENST00000473345 VCANP13611 3396 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 DNM1LO00429 736 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 HLA-DOAP06340 250 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 ADORA2AP29274 412 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 CNGA1P29973 690 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 SNX17Q15036 470 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 ABCB5Q2M3G0 1257 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 TRIM60Q495X7 471 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 CERKLQ49MI3 558 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-223ENST00000473345 CCDC158Q5M9N0 1113 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 MFSD14CQ5VZR4 134 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 SLC39A5Q6ZMH5 540 aa11.76□□□□□ -0.53
MCF2L-223ENST00000473345 BADQ92934 168 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms