RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CPP00450 1065 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 PCCAP05165 728 aaPredicted RBP11.59□□□□□ -0.55
APTX-216ENST00000472896 ATP2B1P20020 1258 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 SWT1Q5T5J6 900 aaKnown RBP11.59□□□□□ -0.55
APTX-216ENST00000472896 TSHZ3Q63HK5 1081 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 RIC3Q7Z5B4 369 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 CCDC91Q7Z6B0 441 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 CEP57L1Q8IYX8 460 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 CD99L2Q8TCZ2 262 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 MYD88Q99836 296 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
APTX-216ENST00000472896 LCMT1Q9UIC8 334 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 CFAP45Q9UL16 551 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 MINPP1Q9UNW1 487 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 HDAC5Q9UQL6 1122 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 MKI67P46013 3256 aaKnown RBP11.59□□□□□ -0.55
APTX-216ENST00000472896 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
APTX-216ENST00000472896 ALDH1A1P00352 501 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 PSMA5P28066 241 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 DHX40Q8IX18 779 aaKnown RBP11.59□□□□□ -0.55
APTX-216ENST00000472896 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 ARMC5Q96C12 935 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 BPIFA3Q9BQP9 254 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 ZSCAN16Q9H4T2 348 aaPredicted RBP11.59□□□□□ -0.55
APTX-216ENST00000472896 ADAM21Q9UKJ8 722 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 CHMP3Q9Y3E7 222 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 ZNF646O15015 1829 aaPredicted RBP11.58□□□□□ -0.56
APTX-216ENST00000472896 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 SFPQP23246 707 aaKnown RBP eCLIP11.58□□□□□ -0.56
APTX-216ENST00000472896 GJA5P36382 358 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 INHBEP58166 350 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 TUBB4BP68371 445 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 ST3GAL1Q11201 340 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 BRD3Q15059 726 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 ME3Q16798 604 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 STRIP1Q5VSL9 837 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 ATL3Q6DD88 541 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.56
APTX-216ENST00000472896 MPHOSPH8Q99549 860 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 IL25Q9H293 177 aa11.58□□□□□ -0.56
APTX-216ENST00000472896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
APTX-216ENST00000472896 LOC102724159A0A0B4J2E5 919 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 GOLGA6L9A6NEM1 432 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 SMC2O95347 1197 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 HOXB7P09629 217 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 ZKSCAN1P17029 563 aaPredicted RBP11.57□□□□□ -0.56
APTX-216ENST00000472896 LMAN1P49257 510 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 PWP2Q15269 919 aaKnown RBP11.57□□□□□ -0.56
APTX-216ENST00000472896 RPAINQ86UA6 219 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 HOMER1Q86YM7 354 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 KIAA0825Q8IV33 1275 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 RABGGTAQ92696 567 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 PGBD1Q96JS3 809 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 JAKMIP1Q96N16 626 aaKnown RBP11.57□□□□□ -0.56
APTX-216ENST00000472896 PTPN18Q99952 460 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 FAM107BQ9H098 131 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 PCDHAC2Q9Y5I4 1007 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 HTTP42858 3142 aa11.57□□□□□ -0.56
APTX-216ENST00000472896 POTEB2H3BUK9 544 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 ZSCAN12O43309 604 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 SASH3O75995 380 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
APTX-216ENST00000472896 KLRK1P26718 216 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 EVCP57679 992 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 CRHR2Q13324 411 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 LRRN4CLQ8ND94 238 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 PI4K2BQ8TCG2 481 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 CEP89Q96ST8 783 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 FUT8Q9BYC5 575 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 COA1Q9GZY4 146 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 MED23Q9ULK4 1368 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 CCDC151A5D8V7 595 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 MAP2K7O14733 419 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
APTX-216ENST00000472896 APPP05067 770 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 CORO7P57737 925 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 TMEM132AQ24JP5 1023 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 NBPF11Q86T75 865 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 APOBEC3FQ8IUX4 373 aaKnown RBP11.56□□□□□ -0.56
APTX-216ENST00000472896 DHX37Q8IY37 1157 aaKnown RBP11.56□□□□□ -0.56
APTX-216ENST00000472896 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
APTX-216ENST00000472896 DEFB129Q9H1M3 183 aa11.56□□□□□ -0.56
APTX-216ENST00000472896 BSDC1Q9NW68 430 aaPredicted RBP11.56□□□□□ -0.56
APTX-216ENST00000472896 CWC25Q9NXE8 425 aaPredicted RBP11.56□□□□□ -0.56
APTX-216ENST00000472896 KIF1CO43896 1103 aaKnown RBP11.55□□□□□ -0.56
APTX-216ENST00000472896 SEC31AO94979 1220 aaKnown RBP11.55□□□□□ -0.56
APTX-216ENST00000472896 HSP90B1P14625 803 aaKnown RBP11.55□□□□□ -0.56
APTX-216ENST00000472896 GYS2P54840 703 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 RESTQ13127 1097 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 ZRSR1Q15695 479 aaKnown RBP11.55□□□□□ -0.56
APTX-216ENST00000472896 MCTP2Q6DN12 878 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 CCDC73Q6ZRK6 1079 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 RSRC2Q7L4I2 434 aaKnown RBP11.55□□□□□ -0.56
APTX-216ENST00000472896 EFCAB13Q8IY85 973 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms