RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 USP17L13C9JLJ4 530 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 KBTBD13C9JR72 458 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 USP17L11C9JVI0 530 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 USP17L18D6R9N7 530 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 USP17L22D6RA61 530 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 USP17L17D6RBQ6 530 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 USP17L19D6RCP7 530 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 USP17L20D6RJB6 530 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 UQCRFS1P1P0C7P4 283 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 FOSL2P15408 326 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 PTPREP23469 700 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 USP17L24Q0WX57 530 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 TEX11Q8IYF3 940 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 ABRAQ8N0Z2 381 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 SHCBP1Q8NEM2 672 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 ZNF384Q8TF68 577 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 ATXN2LQ8WWM7 1075 aaKnown RBP8.38□□□□□ -1.07
SF3A3-205ENST00000470585 KIAA1683Q9H0B3 1180 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 PORCNQ9H237 461 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 CWC22Q9HCG8 908 aaKnown RBP8.38□□□□□ -1.07
SF3A3-205ENST00000470585 ZBTB21Q9ULJ3 1066 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 CDH23Q9H251 3354 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 E9PSI1 815 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 SEPT4O43236 478 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 HLA-DOAP06340 250 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 CYBAP13498 195 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 SHHQ15465 462 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 CCL14Q16627 93 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 Q3C1V9 767 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 SLC39A5Q6ZMH5 540 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 CCDC84Q86UT8 332 aaPredicted RBP8.37□□□□□ -1.07
SF3A3-205ENST00000470585 MB21D1Q8N884 522 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 SPATA5Q8NB90 893 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 XAGE2Q96GT9 111 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 TRIM34Q9BYJ4 488 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 SIL1Q9H173 461 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 EHD4Q9H223 541 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 HMG20BQ9P0W2 317 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.37□□□□□ -1.07
SF3A3-205ENST00000470585 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 SIPA1L1O43166 1804 aa8.37□□□□□ -1.07
SF3A3-205ENST00000470585 FAM196BA6NMK8 535 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 GNAI3P08754 354 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 ADORA1P30542 326 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 RRP1BQ14684 758 aaKnown RBP8.36□□□□□ -1.07
SF3A3-205ENST00000470585 CCDC184Q52MB2 194 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 AKNAD1Q5T1N1 836 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 TATDN1Q6P1N9 297 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 CCDC174Q6PII3 467 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 CATSPERGQ6ZRH7 1159 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 CRACR2BQ8N4Y2 399 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-205ENST00000470585 SSH1Q8WYL5 1049 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 ZNF512BQ96KM6 892 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-205ENST00000470585 TOX2Q96NM4 488 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 TTYH1Q9H313 450 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-205ENST00000470585 GPR108Q9NPR9 543 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 PDLIM7Q9NR12 457 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 EMILIN3Q9NT22 766 aa8.36□□□□□ -1.07
SF3A3-205ENST00000470585 FLT1P17948 1338 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.35□□□□□ -1.07
SF3A3-205ENST00000470585 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.35□□□□□ -1.07
SF3A3-205ENST00000470585 SPDYE4A6NLX3 237 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 KIAA0355O15063 1070 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 CNMDO75829 334 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 COL9A1P20849 921 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 TIMM10P62072 90 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 MYLIPQ8WY64 445 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 FAM161BQ96MY7 647 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 PAGR1Q9BTK6 254 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 API5Q9BZZ5 524 aaKnown RBP8.35□□□□□ -1.07
SF3A3-205ENST00000470585 DNAJC18Q9H819 358 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 HOXC10Q9NYD6 342 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 RAI14Q9P0K7 980 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 LRP2BPQ9P2M1 347 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 PHF24Q9UPV7 400 aa8.35□□□□□ -1.07
SF3A3-205ENST00000470585 CDK5RAP2Q96SN8 1893 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 SLURP2P0DP57 97 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 CNGA1P29973 690 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 PLA2G5P39877 138 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 C9orf50Q5SZB4 431 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 GORABQ5T7V8 394 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 NAA16Q6N069 864 aaPredicted RBP8.34□□□□□ -1.07
SF3A3-205ENST00000470585 POTEEQ6S8J3 1075 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 SH3RF3Q8TEJ3 882 aaPredicted RBP8.34□□□□□ -1.07
SF3A3-205ENST00000470585 ARHGAP45Q92619 1136 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 BADQ92934 168 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 RNPC3Q96LT9 517 aaKnown RBP8.34□□□□□ -1.07
SF3A3-205ENST00000470585 FEZ1Q99689 392 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 TSEN34Q9BSV6 310 aaKnown RBP8.34□□□□□ -1.07
SF3A3-205ENST00000470585 MROH8Q9H579 483 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 FLRT1Q9NZU1 646 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 SERPINB13Q9UIV8 391 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 ATP11BQ9Y2G3 1177 aa8.34□□□□□ -1.07
SF3A3-205ENST00000470585 DIS3Q9Y2L1 958 aaKnown RBP8.34□□□□□ -1.07
SF3A3-205ENST00000470585 MROH7Q68CQ1 1323 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 SPDYE16A6NNV3 312 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-205ENST00000470585 CLTBP09497 229 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms