RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 PRPF3O43395 683 aaKnown RBP10.97□□□□□ -0.65
PRPF3-202ENST00000467329 RXRAP19793 462 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 SHMT1P34896 483 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
PRPF3-202ENST00000467329 KLHL34Q8N239 644 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 NLGN2Q8NFZ4 835 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 DICER1Q9UPY3 1922 aaKnown RBP10.97□□□□□ -0.65
PRPF3-202ENST00000467329 NMT2O60551 498 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 SLC4A8Q2Y0W8 1093 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 CCDC144CPQ8IYA2 1237 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 PNMA1Q8ND90 353 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 DPF2Q92785 391 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 PRMT6Q96LA8 375 aaPredicted RBP10.97□□□□□ -0.65
PRPF3-202ENST00000467329 SLC26A6Q9BXS9 759 aa10.97□□□□□ -0.65
PRPF3-202ENST00000467329 SCAND2PQ9GZW5 306 aaPredicted RBP10.97□□□□□ -0.65
PRPF3-202ENST00000467329 ZNF70Q9UC06 446 aaPredicted RBP10.97□□□□□ -0.65
PRPF3-202ENST00000467329 SMARCA1P28370 1054 aa10.96□□□□□ -0.65
PRPF3-202ENST00000467329 EIF6P56537 245 aaKnown RBP10.96□□□□□ -0.65
PRPF3-202ENST00000467329 TRIM29Q14134 588 aa10.96□□□□□ -0.65
PRPF3-202ENST00000467329 FAM83AQ86UY5 434 aa10.96□□□□□ -0.65
PRPF3-202ENST00000467329 FAM151AQ8WW52 585 aa10.96□□□□□ -0.65
PRPF3-202ENST00000467329 ZNF396Q96N95 335 aaPredicted RBP10.96□□□□□ -0.65
PRPF3-202ENST00000467329 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.96□□□□□ -0.65
PRPF3-202ENST00000467329 TDRD3Q9H7E2 651 aaKnown RBP10.96□□□□□ -0.65
PRPF3-202ENST00000467329 PCDHAC2Q9Y5I4 1007 aa10.96□□□□□ -0.65
PRPF3-202ENST00000467329 CNTNAP5Q8WYK1 1306 aa10.96□□□□□ -0.66
PRPF3-202ENST00000467329 PRPF40AO75400 957 aaKnown RBP10.96□□□□□ -0.66
PRPF3-202ENST00000467329 AKAP17AQ02040 695 aaKnown RBP10.96□□□□□ -0.66
PRPF3-202ENST00000467329 DNM1Q05193 864 aaKnown RBP10.96□□□□□ -0.66
PRPF3-202ENST00000467329 SH3BP5LQ7L8J4 393 aa10.96□□□□□ -0.66
PRPF3-202ENST00000467329 PHKBQ93100 1093 aa10.96□□□□□ -0.66
PRPF3-202ENST00000467329 TMEM47Q9BQJ4 181 aa10.96□□□□□ -0.66
PRPF3-202ENST00000467329 HERC5Q9UII4 1024 aaKnown RBP10.96□□□□□ -0.66
PRPF3-202ENST00000467329 CNPY2Q9Y2B0 182 aa10.96□□□□□ -0.66
PRPF3-202ENST00000467329 DTNBO60941 627 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 NCLP19338 710 aaKnown RBP10.95□□□□□ -0.66
PRPF3-202ENST00000467329 TATDN1Q6P1N9 297 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 FERMT3Q86UX7 667 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 ZFPM1Q8IX07 1006 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 MTMR4Q9NYA4 1195 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 CFAP45Q9UL16 551 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 SYNPO2Q9UMS6 1093 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 DDTLA6NHG4 134 aaPredicted RBP10.95□□□□□ -0.66
PRPF3-202ENST00000467329 MYO1BO43795 1136 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 AKR1B1P15121 316 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 UBE2HP62256 183 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 KIF23Q02241 960 aaPredicted RBP10.95□□□□□ -0.66
PRPF3-202ENST00000467329 RASSF7Q02833 373 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 KRT40Q6A162 431 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 USP48Q86UV5 1035 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 CEP95Q96GE4 821 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 TRIM34Q9BYJ4 488 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
PRPF3-202ENST00000467329 DDX49Q9Y6V7 483 aaKnown RBP10.95□□□□□ -0.66
PRPF3-202ENST00000467329 CNTNAP1P78357 1384 aa10.95□□□□□ -0.66
PRPF3-202ENST00000467329 MYH6P13533 1939 aa10.94□□□□□ -0.66
PRPF3-202ENST00000467329 PALM3A6NDB9 673 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-202ENST00000467329 XBP1P17861 261 aa10.94□□□□□ -0.66
PRPF3-202ENST00000467329 TBC1D12O60347 775 aa10.94□□□□□ -0.66
PRPF3-202ENST00000467329 PLEKHA8P1O95397 391 aa10.94□□□□□ -0.66
PRPF3-202ENST00000467329 TTLL1O95922 423 aa10.94□□□□□ -0.66
PRPF3-202ENST00000467329 SPZ1Q9BXG8 430 aa10.94□□□□□ -0.66
PRPF3-202ENST00000467329 DNAJC18Q9H819 358 aa10.94□□□□□ -0.66
PRPF3-202ENST00000467329 MYOZ2Q9NPC6 264 aa10.94□□□□□ -0.66
PRPF3-202ENST00000467329 LMNB1P20700 586 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 U2AF2P26368 475 aaKnown RBP eCLIP10.93□□□□□ -0.661e-7■■■■□ 21.8
PRPF3-202ENST00000467329 PRELPP51888 382 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 CACNB3P54284 484 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 TCP10Q12799 353 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRPF3-202ENST00000467329 ZSCAN29Q8IWY8 852 aaPredicted RBP10.93□□□□□ -0.66
PRPF3-202ENST00000467329 CHAMP1Q96JM3 812 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 NYAP2Q9P242 653 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 MAD2L2Q9UI95 211 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 STX8Q9UNK0 236 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 FIBPO43427 364 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 MMP1P03956 469 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 SNHG28P0DPA3 235 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 TNNI2P48788 182 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 PKN1Q16512 942 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 ASPRV1Q53RT3 343 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 TMEM179Q6ZVK1 233 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 SRBD1Q8N5C6 995 aaKnown RBP10.93□□□□□ -0.66
PRPF3-202ENST00000467329 LEO1Q8WVC0 666 aaPredicted RBP10.93□□□□□ -0.66
PRPF3-202ENST00000467329 MKL1Q969V6 931 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
PRPF3-202ENST00000467329 FOXP1Q9H334 677 aaPredicted RBP10.93□□□□□ -0.66
PRPF3-202ENST00000467329 SH3GLB2Q9NR46 395 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 RCOR1Q9UKL0 485 aa10.93□□□□□ -0.66
PRPF3-202ENST00000467329 TCHHQ07283 1943 aa10.92□□□□□ -0.66
PRPF3-202ENST00000467329 GMPSP49915 693 aaPredicted RBP10.92□□□□□ -0.66
PRPF3-202ENST00000467329 FOSBP53539 338 aa10.92□□□□□ -0.66
PRPF3-202ENST00000467329 GUCY1B3Q02153 619 aa10.92□□□□□ -0.66
PRPF3-202ENST00000467329 TNFAIP1Q13829 316 aa10.92□□□□□ -0.66
PRPF3-202ENST00000467329 PFKFB3Q16875 520 aaPredicted RBP10.92□□□□□ -0.66
PRPF3-202ENST00000467329 CERKLQ49MI3 558 aaPredicted RBP10.92□□□□□ -0.66
PRPF3-202ENST00000467329 KANSL2Q9H9L4 492 aa10.92□□□□□ -0.66
PRPF3-202ENST00000467329 RTEL1Q9NZ71 1219 aa10.92□□□□□ -0.66
PRPF3-202ENST00000467329 PARP1P09874 1014 aaKnown RBP10.92□□□□□ -0.66
PRPF3-202ENST00000467329 GUCY1A2P33402 732 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms