RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 AKR1B1P15121 316 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 RASA1P20936 1047 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 NT5C2P49902 561 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 CRHR2Q13324 411 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 SEPT2Q15019 361 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 USP17L2Q6R6M4 530 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 GADL1Q6ZQY3 521 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 C12orf42Q96LP6 360 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 TSKSQ9UJT2 592 aa27.72■■■□□ 2.03
SUMO3-205ENST00000466861 CASP8AP2Q9UKL3 1982 aa27.71■■■□□ 2.03
SUMO3-205ENST00000466861 GPR25O00155 361 aa27.71■■■□□ 2.03
SUMO3-205ENST00000466861 HMGCS2P54868 508 aa27.71■■■□□ 2.03
SUMO3-205ENST00000466861 MTMR2Q13614 643 aa27.71■■■□□ 2.03
SUMO3-205ENST00000466861 ZNF444Q8N0Y2 327 aaPredicted RBP27.71■■■□□ 2.03
SUMO3-205ENST00000466861 PARK7Q99497 189 aaKnown RBP27.71■■■□□ 2.03
SUMO3-205ENST00000466861 KANSL2Q9H9L4 492 aa27.71■■■□□ 2.03
SUMO3-205ENST00000466861 TLR2O60603 784 aa27.7■■■□□ 2.02
SUMO3-205ENST00000466861 FGRP09769 529 aa27.7■■■□□ 2.02
SUMO3-205ENST00000466861 SH2D4AQ9H788 454 aa27.7■■■□□ 2.02
SUMO3-205ENST00000466861 CTNNA3Q9UI47 895 aa27.7■■■□□ 2.02
SUMO3-205ENST00000466861 PNMA3Q9UL41 463 aa27.7■■■□□ 2.02
SUMO3-205ENST00000466861 ARHGEF10LQ9HCE6 1279 aa27.69■■■□□ 2.02
SUMO3-205ENST00000466861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.69■■■□□ 2.02
SUMO3-205ENST00000466861 SGSM2O43147 1006 aa27.68■■■□□ 2.02
SUMO3-205ENST00000466861 ORC4O43929 436 aa27.68■■■□□ 2.02
SUMO3-205ENST00000466861 HOXA7P31268 230 aaPredicted RBP27.68■■■□□ 2.02
SUMO3-205ENST00000466861 FEZ1Q99689 392 aa27.68■■■□□ 2.02
SUMO3-205ENST00000466861 PLIN4Q96Q06 1357 aa27.68■■■□□ 2.02
SUMO3-205ENST00000466861 LAMA4Q16363 1823 aa27.67■■■□□ 2.02
SUMO3-205ENST00000466861 FKTNO75072 461 aa27.67■■■□□ 2.02
SUMO3-205ENST00000466861 ICA1Q05084 483 aa27.67■■■□□ 2.02
SUMO3-205ENST00000466861 PPP4R3BQ5MIZ7 849 aa27.67■■■□□ 2.02
SUMO3-205ENST00000466861 R3HDMLQ9H3Y0 253 aa27.67■■■□□ 2.02
SUMO3-205ENST00000466861 NEDD1Q8NHV4 660 aa27.66■■■□□ 2.02
SUMO3-205ENST00000466861 ACER1Q8TDN7 264 aa27.66■■■□□ 2.02
SUMO3-205ENST00000466861 ZNF296Q8WUU4 475 aaPredicted RBP27.66■■■□□ 2.02
SUMO3-205ENST00000466861 EMILIN3Q9NT22 766 aa27.66■■■□□ 2.02
SUMO3-205ENST00000466861 SYNPO2Q9UMS6 1093 aa27.66■■■□□ 2.02
SUMO3-205ENST00000466861 TMX2Q9Y320 296 aa27.66■■■□□ 2.02
SUMO3-205ENST00000466861 OSBPP22059 807 aa27.65■■■□□ 2.02
SUMO3-205ENST00000466861 SKAP1Q86WV1 359 aa27.65■■■□□ 2.02
SUMO3-205ENST00000466861 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.65■■■□□ 2.02
SUMO3-205ENST00000466861 RNF41Q9H4P4 317 aaPredicted RBP27.65■■■□□ 2.02
SUMO3-205ENST00000466861 NYAP2Q9P242 653 aa27.65■■■□□ 2.02
SUMO3-205ENST00000466861 ADGRA2Q96PE1 1338 aa27.65■■■□□ 2.02
SUMO3-205ENST00000466861 IGKV6D-41A0A0C4DH26 115 aa27.64■■■□□ 2.02
SUMO3-205ENST00000466861 ZNF213O14771 459 aa27.64■■■□□ 2.02
SUMO3-205ENST00000466861 CTDSPL2Q05D32 466 aa27.64■■■□□ 2.02
SUMO3-205ENST00000466861 TREML2Q5T2D2 321 aa27.64■■■□□ 2.02
SUMO3-205ENST00000466861 SIAH1Q8IUQ4 282 aa27.64■■■□□ 2.02
SUMO3-205ENST00000466861 STK11IPQ8N1F8 1099 aa27.64■■■□□ 2.02
SUMO3-205ENST00000466861 LPAR1Q92633 364 aa27.64■■■□□ 2.02
SUMO3-205ENST00000466861 IL25Q9H293 177 aa27.64■■■□□ 2.02
SUMO3-205ENST00000466861 A0A1W2PRG0 241 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 PRDM1O75626 825 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 TSPY3P0CV98 308 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 TSPY8P0CW00 308 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 SP3Q02447 781 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 CASC1Q6TDU7 716 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 C17orf99Q6UX52 265 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 STAG1Q8WVM7 1258 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 ERO1AQ96HE7 468 aa27.63■■■□□ 2.01
SUMO3-205ENST00000466861 IMMTQ16891 758 aaKnown RBP27.62■■■□□ 2.01
SUMO3-205ENST00000466861 AKNAD1Q5T1N1 836 aa27.62■■■□□ 2.01
SUMO3-205ENST00000466861 GTF3C2Q8WUA4 911 aaPredicted RBP27.62■■■□□ 2.01
SUMO3-205ENST00000466861 EEF2P13639 858 aaKnown RBP27.61■■■□□ 2.01
SUMO3-205ENST00000466861 GCLCP48506 637 aaPredicted RBP27.61■■■□□ 2.01
SUMO3-205ENST00000466861 TFAP4Q01664 338 aa27.61■■■□□ 2.01
SUMO3-205ENST00000466861 ARHGEF6Q15052 776 aa27.61■■■□□ 2.01
SUMO3-205ENST00000466861 ESYT1Q9BSJ8 1104 aa27.61■■■□□ 2.01
SUMO3-205ENST00000466861 U3KPZ7 1027 aaPredicted RBP27.61■■■□□ 2.01
SUMO3-205ENST00000466861 TSPY2A6NKD2 308 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L15C9J2P7 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L13C9JLJ4 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L11C9JVI0 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L18D6R9N7 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L22D6RA61 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L17D6RBQ6 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L19D6RCP7 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L20D6RJB6 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 CDC45O75419 566 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 IRX3P78415 501 aaPredicted RBP27.6■■■□□ 2.01
SUMO3-205ENST00000466861 USP17L24Q0WX57 530 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 MFSD6Q6ZSS7 791 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 SMCR8Q8TEV9 937 aaPredicted RBP27.6■■■□□ 2.01
SUMO3-205ENST00000466861 MKL1Q969V6 931 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 ASCC2Q9H1I8 757 aaPredicted RBP27.6■■■□□ 2.01
SUMO3-205ENST00000466861 VCPKMTQ9H867 229 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 MTMR4Q9NYA4 1195 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 MYH4Q9Y623 1939 aa27.6■■■□□ 2.01
SUMO3-205ENST00000466861 TTLL1O95922 423 aa27.59■■■□□ 2.01
SUMO3-205ENST00000466861 CYP2C8P10632 490 aa27.59■■■□□ 2.01
SUMO3-205ENST00000466861 VCAM1P19320 739 aa27.59■■■□□ 2.01
SUMO3-205ENST00000466861 HAND2P61296 217 aa27.59■■■□□ 2.01
SUMO3-205ENST00000466861 COL13A1Q5TAT6 717 aaPredicted RBP27.59■■■□□ 2.01
SUMO3-205ENST00000466861 KIAA1211Q6ZU35 1233 aa27.59■■■□□ 2.01
SUMO3-205ENST00000466861 GOPCQ9HD26 462 aa27.59■■■□□ 2.01
SUMO3-205ENST00000466861 BCRP11274 1271 aa27.58■■■□□ 2.01
SUMO3-205ENST00000466861 DGKZQ13574 1117 aa27.58■■■□□ 2.01
SUMO3-205ENST00000466861 ZYXQ15942 572 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms