RNA–Protein interactions for RNA: ENST00000463563.6

U2SURP-203, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 2

Gene U2SURP, Length 4,364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-203ENST00000463563 PDGFDQ9GZP0 370 aaPredicted RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 RTCBQ9Y3I0 505 aaKnown RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 SYNDIG1LA6NDD5 238 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 POTEB2H3BUK9 544 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 TMEM127O75204 238 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 CCNFP41002 786 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 NAP1L1P55209 391 aaKnown RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 PSMC1P62191 440 aaKnown RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 CENPCQ03188 943 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 SEPT7Q16181 437 aaKnown RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 LONRF2Q1L5Z9 754 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 NBPF9Q3BBW0 867 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 AGAP9Q5VTM2 703 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 YOD1Q5VVQ6 348 aaPredicted RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 TMCO3Q6UWJ1 677 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 ANKRD23Q86SG2 305 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 CHMP4CQ96CF2 233 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 PGBD4Q96DM1 585 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 TRMT2BQ96GJ1 504 aaKnown RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 HSH2DQ96JZ2 352 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 SUSD3Q96L08 255 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 STRBPQ96SI9 672 aaKnown RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 KIF2CQ99661 725 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 ZNF69Q9UC07 566 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 PCDHGB3Q9Y5G1 929 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 ROBO2Q9HCK4 1378 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 FRMPD2Q68DX3 1309 aaPredicted RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 DNAJC25-GNG10A0A024R161 153 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 UBAP1LF5GYI3 381 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 IFIT1P09914 478 aaKnown RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 TGFB3P10600 412 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 RLBP1P12271 317 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 ECE1P42892 770 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 PPP2R5CQ13362 524 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 SLC9A5Q14940 896 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 TTBK2Q6IQ55 1244 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 ZCCHC8Q6NZY4 707 aaKnown RBP3.18□□□□□ -1.9
U2SURP-203ENST00000463563 FAM180BQ6P0A1 224 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 XRRA1Q6P2D8 792 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 GK5Q6ZS86 529 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 CEP120Q8N960 986 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 COG1Q8WTW3 980 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 POF1BQ8WVV4 589 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 TMEM87BQ96K49 555 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 CNTNAP3BQ96NU0 1288 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 CNTNAP3Q9BZ76 1288 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 MTFR1LQ9H019 292 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 EHD4Q9H223 541 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 TRHDEQ9UKU6 1024 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 SNX5Q9Y5X3 404 aa3.18□□□□□ -1.9
U2SURP-203ENST00000463563 PMM2O15305 246 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 CILPO75339 1184 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 SLMAPQ14BN4 828 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 PCBP1Q15365 356 aaKnown RBP eCLIP3.17□□□□□ -1.93e-8■■■□□ 16.8
U2SURP-203ENST00000463563 ZYXQ15942 572 aaKnown RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 SLC10A6Q3KNW5 377 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 PPP1R26Q5T8A7 1209 aaPredicted RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 TTC6Q86TZ1 520 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 REXO1Q8N1G1 1221 aaKnown RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 CBARPQ8N350 705 aaPredicted RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 MGARPQ8TDB4 240 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 NUP133Q8WUM0 1156 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 ATXN2LQ8WWM7 1075 aaKnown RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 NUDT16L1Q9BRJ7 211 aaKnown RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 RRN3Q9NYV6 651 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 FCF1Q9Y324 198 aaKnown RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 FAM170AA1A519 330 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 INMTO95050 263 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 NR3C2P08235 984 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 SLC5A1P13866 664 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 ATP6V1E1P36543 226 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 CLK1P49759 484 aaKnown RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 STAT4Q14765 748 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 RGL3Q3MIN7 710 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 MFSD4BQ5TF39 518 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 REC114Q7Z4M0 266 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 KRT77Q7Z794 578 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 MRPL50Q8N5N7 158 aaKnown RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 GOLGA1Q92805 767 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 NECAB3Q96P71 396 aaPredicted RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 POLR3KQ9Y2Y1 108 aaPredicted RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 FZD9O00144 591 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 HRO43593 1189 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 DNAJC8O75937 253 aaPredicted RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 MYBP10242 640 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 FOSL1P15407 271 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 IRX3P78415 501 aaPredicted RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 FAAP100Q0VG06 881 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 G3BP1Q13283 466 aaKnown RBP eCLIP3.17□□□□□ -1.92e-7■■□□□ 13
U2SURP-203ENST00000463563 MPP2Q14168 576 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 FAM209AQ5JX71 171 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 TTC30AQ86WT1 665 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 FAM186BQ8IYM0 893 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 DDX1Q92499 740 aaKnown RBP3.17□□□□□ -1.9
U2SURP-203ENST00000463563 CLIP3Q96DZ5 547 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 EHMT1Q9H9B1 1298 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 WBP1LQ9NX94 342 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 SYNPO2Q9UMS6 1093 aa3.17□□□□□ -1.9
U2SURP-203ENST00000463563 DGKBQ9Y6T7 804 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms