RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 GPRC5DQ9NZD1 345 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 HMG20BQ9P0W2 317 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 SUGT1Q9Y2Z0 365 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 COL1A1P02452 1464 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 H7C1D1 291 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 VEGFAP15692 232 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 MCAMP43121 646 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 SCNN1DP51172 638 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 STX1AQ16623 288 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 CNPY4Q8N129 248 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 GMLQ99445 158 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 SCN4AP35499 1836 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 PPP1R12AO14974 1030 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 TUBBP07437 444 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 TTC6Q86TZ1 520 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 MXD3Q9BW11 206 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 TM6SF1Q9BZW5 370 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 CNOT7Q9UIV1 285 aaKnown RBP13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 GOLGA6L4A6NEF3 574 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 GOLGA6L9A6NEM1 432 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 SASH3O75995 380 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 LIG1P18858 919 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 ATP5JP18859 108 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 TADA2BQ86TJ2 420 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 RRAGCQ9HB90 399 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
TRAPPC3-205ENST00000462715 MAST3O60307 1309 aa13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 SMC2O95347 1197 aa13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 SCARF1Q14162 830 aa13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 KIAA0825Q8IV33 1275 aa13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 VPS53Q5VIR6 699 aa13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 RSRC2Q7L4I2 434 aaKnown RBP13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 ZNF784Q8NCA9 323 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 NMRK2Q9NPI5 230 aa13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 ADARB2Q9NS39 739 aaKnown RBP13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
TRAPPC3-205ENST00000462715 PPFIA4O75335 1185 aa13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 GJB2P29033 226 aa13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 EPHX2P34913 555 aa13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 ZNF280AP59817 542 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 PI16Q6UXB8 463 aa13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 NAT10Q9H0A0 1025 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 DNAJC25Q9H1X3 360 aa13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 ABCF2Q9UG63 623 aa13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 TTF2Q9UNY4 1162 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 F8W031 263 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 EPS15P42566 896 aa13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 EVCP57679 992 aa13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 PNMA8AQ86V59 439 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC3-205ENST00000462715 CCDC189A1A4V9 331 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 GLRX3O76003 335 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 ZAP70P43403 619 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 USP5P45974 858 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 AK2P54819 239 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 USP50Q70EL3 339 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 UPF3BQ9BZI7 483 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 ACBD3Q9H3P7 528 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 ANO10Q9NW15 660 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 AKAP11Q9UKA4 1901 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 POTECB2RU33 542 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 APOBRQ0VD83 1088 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 TUBB2AQ13885 445 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 HDXQ7Z353 690 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 HAUS7Q99871 368 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 TUBB2BQ9BVA1 445 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 ZCCHC17Q9NP64 241 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 MYOZ2Q9NPC6 264 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 LRP2BPQ9P2M1 347 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 SERPINA10Q9UK55 444 aa13.09□□□□□ -0.31
TRAPPC3-205ENST00000462715 BECN2A8MW95 431 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 ERCC3P19447 782 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 PRDX5P30044 214 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 HDLBPQ00341 1268 aaKnown RBP13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 FAM71BQ8TC56 605 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms