RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
CBX3-205ENST00000462165 SNRKQ9NRH2 765 aa13.31□□□□□ -0.28
CBX3-205ENST00000462165 LTBP2Q14767 1821 aa13.31□□□□□ -0.28
CBX3-205ENST00000462165 CNMDO75829 334 aa13.3□□□□□ -0.28
CBX3-205ENST00000462165 CCNA1P78396 465 aa13.3□□□□□ -0.28
CBX3-205ENST00000462165 CCDC158Q5M9N0 1113 aa13.3□□□□□ -0.28
CBX3-205ENST00000462165 RLFQ13129 1914 aa13.3□□□□□ -0.28
CBX3-205ENST00000462165 USP17L15C9J2P7 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 USP17L13C9JLJ4 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 USP17L11C9JVI0 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 USP17L18D6R9N7 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 USP17L22D6RA61 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 USP17L17D6RBQ6 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 USP17L19D6RCP7 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 USP17L20D6RJB6 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 MSCO60682 206 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 GLRX3O76003 335 aaKnown RBP13.29□□□□□ -0.28
CBX3-205ENST00000462165 GH2P01242 217 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 PTPREP23469 700 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 USP17L24Q0WX57 530 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 TNNI3KQ59H18 835 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 MFSD14CQ5VZR4 134 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 CATSPERGQ6ZRH7 1159 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 ZNF512BQ96KM6 892 aaPredicted RBP13.29□□□□□ -0.28
CBX3-205ENST00000462165 DBNDD2Q9BQY9 259 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 COL25A1Q9BXS0 654 aaPredicted RBP13.29□□□□□ -0.28
CBX3-205ENST00000462165 SENP6Q9GZR1 1112 aaPredicted RBP13.29□□□□□ -0.28
CBX3-205ENST00000462165 CWC22Q9HCG8 908 aaKnown RBP13.29□□□□□ -0.28
CBX3-205ENST00000462165 FLRT1Q9NZU1 646 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 SAP30BPQ9UHR5 308 aaKnown RBP13.29□□□□□ -0.28
CBX3-205ENST00000462165 FPGT-TNNI3KV9GXZ4 949 aa13.29□□□□□ -0.28
CBX3-205ENST00000462165 ZNF236Q9UL36 1845 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 SLC15A5A6NIM6 579 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 HOXC6P09630 235 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 USP14P54578 494 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 DYNLL1P63167 89 aaKnown RBP13.28□□□□□ -0.28
CBX3-205ENST00000462165 TATDN1Q6P1N9 297 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 LBX2Q6XYB7 198 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 LPAR1Q92633 364 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 GUCD1Q96NT3 240 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 DDX20Q9UHI6 824 aaKnown RBP13.28□□□□□ -0.28
CBX3-205ENST00000462165 CDH23Q9H251 3354 aa13.28□□□□□ -0.28
CBX3-205ENST00000462165 DNM1LO00429 736 aa13.27□□□□□ -0.29
CBX3-205ENST00000462165 TRIM27P14373 513 aa13.27□□□□□ -0.29
CBX3-205ENST00000462165 ZAP70P43403 619 aa13.27□□□□□ -0.29
CBX3-205ENST00000462165 GRB14Q14449 540 aa13.27□□□□□ -0.29
CBX3-205ENST00000462165 CERS3Q8IU89 383 aa13.27□□□□□ -0.29
CBX3-205ENST00000462165 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.27□□□□□ -0.29
CBX3-205ENST00000462165 LBHD1Q9BQE6 289 aaPredicted RBP13.27□□□□□ -0.29
CBX3-205ENST00000462165 KIAA1683Q9H0B3 1180 aa13.27□□□□□ -0.29
CBX3-205ENST00000462165 EHD4Q9H223 541 aa13.27□□□□□ -0.29
CBX3-205ENST00000462165 PIH1D3Q9NQM4 214 aaKnown RBP13.27□□□□□ -0.29
CBX3-205ENST00000462165 IVNS1ABPQ9Y6Y0 642 aa13.27□□□□□ -0.29
CBX3-205ENST00000462165 SPTBN5Q9NRC6 3674 aaKnown RBP13.26□□□□□ -0.29
CBX3-205ENST00000462165 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
CBX3-205ENST00000462165 IGHA2P01877 340 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 VCAM1P19320 739 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 ZYXQ15942 572 aaKnown RBP13.26□□□□□ -0.29
CBX3-205ENST00000462165 NPLOC4Q8TAT6 608 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 FEZ1Q99689 392 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 BTBD7Q9P203 1132 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 SERPINB13Q9UIV8 391 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 TNNQ9UQP3 1299 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 NDUFB9Q9Y6M9 179 aa13.26□□□□□ -0.29
CBX3-205ENST00000462165 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 SPDYE16A6NNV3 312 aaPredicted RBP13.25□□□□□ -0.29
CBX3-205ENST00000462165 CYP7A1P22680 504 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 CNGA1P29973 690 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
CBX3-205ENST00000462165 RTP1P59025 263 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 RAB3GAP1Q15042 981 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
CBX3-205ENST00000462165 WDR78Q5VTH9 848 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 ACER1Q8TDN7 264 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 SSH3Q8TE77 659 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 PRKAG2Q9UGJ0 569 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 NAV1Q8NEY1 1877 aa13.25□□□□□ -0.29
CBX3-205ENST00000462165 ZNFX1Q9P2E3 1918 aaKnown RBP13.24□□□□□ -0.29
CBX3-205ENST00000462165 CYBAP13498 195 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 CYP2C19P33261 490 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 USP5P45974 858 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 OS9Q13438 667 aaPredicted RBP13.24□□□□□ -0.29
CBX3-205ENST00000462165 ABCB5Q2M3G0 1257 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 ZNF697Q5TEC3 545 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 MIGA1Q8NAN2 632 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 TRPV1Q8NER1 839 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 FAM161BQ96MY7 647 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 CABP5Q9NP86 173 aa13.24□□□□□ -0.29
CBX3-205ENST00000462165 DBNLQ9UJU6 430 aaKnown RBP13.24□□□□□ -0.29
CBX3-205ENST00000462165 IDH1O75874 414 aaKnown RBP13.23□□□□□ -0.29
CBX3-205ENST00000462165 SHMT1P34896 483 aa13.23□□□□□ -0.29
CBX3-205ENST00000462165 ATP8B2P98198 1209 aa13.23□□□□□ -0.29
CBX3-205ENST00000462165 OLFML2BQ68BL8 750 aa13.23□□□□□ -0.29
CBX3-205ENST00000462165 TMED8Q6PL24 325 aaPredicted RBP13.23□□□□□ -0.29
CBX3-205ENST00000462165 CLUAP1Q96AJ1 413 aa13.23□□□□□ -0.29
CBX3-205ENST00000462165 RPAP3Q9H6T3 665 aaPredicted RBP13.23□□□□□ -0.29
CBX3-205ENST00000462165 MYH8P13535 1937 aa13.23□□□□□ -0.29
CBX3-205ENST00000462165 PARP14Q460N5 1801 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms