RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ZNF652Q9Y2D9 606 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 SLIT2O94813 1529 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 LDHBP07195 334 aaKnown RBP9.04□□□□□ -0.96
BRCC3-208ENST00000453705 ANKRD45Q5TZF3 282 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 OR8H2Q8N162 312 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 LRRN4Q8WUT4 740 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 DNAAF4Q8WXU2 420 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 SELENOOQ9BVL4 669 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 ABCG4Q9H172 646 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 TSKSQ9UJT2 592 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 BCORQ6W2J9 1755 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 AKAP10O43572 662 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 IFIT2P09913 472 aaKnown RBP9.04□□□□□ -0.96
BRCC3-208ENST00000453705 ETFBP38117 255 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 SARSP49591 514 aaKnown RBP9.04□□□□□ -0.96
BRCC3-208ENST00000453705 CTDSPL2Q05D32 466 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 TAF1CQ15572 869 aaPredicted RBP9.04□□□□□ -0.96
BRCC3-208ENST00000453705 NFKBIBQ15653 356 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 FXNQ16595 210 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 PLEKHM2Q8IWE5 1019 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 ARL10Q8N8L6 244 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 GTF3C2Q8WUA4 911 aaPredicted RBP9.04□□□□□ -0.96
BRCC3-208ENST00000453705 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
BRCC3-208ENST00000453705 DEPDC7Q96QD5 511 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 SPATA31A6Q5VVP1 1343 aa9.04□□□□□ -0.96
BRCC3-208ENST00000453705 TRIM6-TRIM34B2RNG4 842 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 VARSP26640 1264 aaKnown RBP9.03□□□□□ -0.96
BRCC3-208ENST00000453705 STT3AP46977 705 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 INHBEP58166 350 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 SQSTM1Q13501 440 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 SOGA3Q5TF21 947 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 MPRIPQ6WCQ1 1025 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 TOM1L2Q6ZVM7 507 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 PARD3BQ8TEW8 1205 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 EMID1Q96A84 441 aaPredicted RBP9.03□□□□□ -0.96
BRCC3-208ENST00000453705 SRCIN1Q9C0H9 1055 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 SRA1Q9HD15 236 aaKnown RBP9.03□□□□□ -0.96
BRCC3-208ENST00000453705 METTL5Q9NRN9 209 aaKnown RBP9.03□□□□□ -0.96
BRCC3-208ENST00000453705 MYH3P11055 1940 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 THSD7AQ9UPZ6 1657 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 SKILP12757 684 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 CD151P48509 253 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 TTC22Q5TAA0 569 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 CKAP2LQ8IYA6 745 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 SAMD14Q8IZD0 417 aaPredicted RBP9.03□□□□□ -0.96
BRCC3-208ENST00000453705 TRMT2BQ96GJ1 504 aaKnown RBP9.03□□□□□ -0.96
BRCC3-208ENST00000453705 DNAJC7Q99615 494 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
BRCC3-208ENST00000453705 RRAGDQ9NQL2 400 aaPredicted RBP9.03□□□□□ -0.96
BRCC3-208ENST00000453705 hCG_1642624A0A1W2PR95 340 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 F2P00734 622 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 CTSHP09668 335 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 IL2RBP14784 551 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 UBA7P41226 1012 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 HSD17B7P56937 341 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 KCNH2Q12809 1159 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 FKBP5Q13451 457 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 DNTTIP2Q5QJE6 756 aaKnown RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 HNRNPLLQ8WVV9 542 aaKnown RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 CCDC94Q9BW85 323 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 RTFDC1Q9BY42 306 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 PDCL3Q9H2J4 239 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 GINM1Q9NU53 330 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 MORC2Q9Y6X9 1032 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 C21orf2O43822 256 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 SLC34A2O95436 690 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 DDX58O95786 925 aaKnown RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 SNRPA1P09661 255 aaKnown RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 PPP4R3AQ6IN85 833 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 LINS1Q8NG48 757 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 AKT1S1Q96B36 256 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 FMNL2Q96PY5 1086 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 STRN4Q9NRL3 753 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 TRMT1Q9NXH9 659 aaKnown RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 BTG4Q9NY30 223 aa9.02□□□□□ -0.97
BRCC3-208ENST00000453705 FBXO2Q9UK22 296 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-208ENST00000453705 TSPY2A6NKD2 308 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 GOLGA6L22H0YM25 854 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 KCNQ3O43525 872 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 TPM2P07951 284 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 NBPF7P0C2Y1 421 aaPredicted RBP9.01□□□□□ -0.97
BRCC3-208ENST00000453705 TSPY3P0CV98 308 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 TSPY8P0CW00 308 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 CASP2P42575 452 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 TSPY1Q01534 308 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 MILR1Q7Z6M3 343 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 UPF2Q9HAU5 1272 aaKnown RBP9.01□□□□□ -0.97
BRCC3-208ENST00000453705 ARAP2Q8WZ64 1704 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 NUTM2BA6NNL0 878 aaPredicted RBP9.01□□□□□ -0.97
BRCC3-208ENST00000453705 NUTM2EB1AL46 878 aaPredicted RBP9.01□□□□□ -0.97
BRCC3-208ENST00000453705 H0Y3Z8 333 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 TUBB8Q3ZCM7 444 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 GJC2Q5T442 439 aaPredicted RBP9.01□□□□□ -0.97
BRCC3-208ENST00000453705 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 NUTM2AQ8IVF1 878 aaPredicted RBP9.01□□□□□ -0.97
BRCC3-208ENST00000453705 SPIRE2Q8WWL2 714 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 DHX36Q9H2U1 1008 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms