RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 LPAR1Q92633 364 aa17.46■□□□□ 0.39
LYSMD3-202ENST00000453259 FEZ1Q99689 392 aa17.46■□□□□ 0.39
LYSMD3-202ENST00000453259 LBHD1Q9BQE6 289 aaPredicted RBP17.46■□□□□ 0.39
LYSMD3-202ENST00000453259 SERPINB13Q9UIV8 391 aa17.46■□□□□ 0.39
LYSMD3-202ENST00000453259 DNM1LO00429 736 aa17.45■□□□□ 0.38
LYSMD3-202ENST00000453259 GH2P01242 217 aa17.45■□□□□ 0.38
LYSMD3-202ENST00000453259 CCL14Q16627 93 aa17.45■□□□□ 0.38
LYSMD3-202ENST00000453259 Q7L0L9 218 aa17.45■□□□□ 0.38
LYSMD3-202ENST00000453259 ADGRA1Q86SQ6 560 aa17.45■□□□□ 0.38
LYSMD3-202ENST00000453259 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
LYSMD3-202ENST00000453259 SSH3Q8TE77 659 aa17.45■□□□□ 0.38
LYSMD3-202ENST00000453259 DDX20Q9UHI6 824 aaKnown RBP17.45■□□□□ 0.38
LYSMD3-202ENST00000453259 FRMPD3Q5JV73 1810 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 POTEB2H3BUK9 544 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 PTPREP23469 700 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 GRB14Q14449 540 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 CATSPERGQ6ZRH7 1159 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 DBNDD2Q9BQY9 259 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 SNRKQ9NRH2 765 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 PRKAG2Q9UGJ0 569 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 ZNF236Q9UL36 1845 aa17.44■□□□□ 0.38
LYSMD3-202ENST00000453259 STRNO43815 780 aa17.43■□□□□ 0.38
LYSMD3-202ENST00000453259 VCAM1P19320 739 aa17.43■□□□□ 0.38
LYSMD3-202ENST00000453259 ATP2B2Q01814 1243 aa17.43■□□□□ 0.38
LYSMD3-202ENST00000453259 POTEEQ6S8J3 1075 aa17.43■□□□□ 0.38
LYSMD3-202ENST00000453259 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
LYSMD3-202ENST00000453259 CABP5Q9NP86 173 aa17.43■□□□□ 0.38
LYSMD3-202ENST00000453259 CNMDO75829 334 aa17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 CYP7A1P22680 504 aa17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 ZAP70P43403 619 aa17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 USP5P45974 858 aa17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 ARRDC4Q8NCT1 418 aa17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 SENP6Q9GZR1 1112 aaPredicted RBP17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 SAP30BPQ9UHR5 308 aaKnown RBP17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
LYSMD3-202ENST00000453259 PEX10O60683 326 aa17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 IGHA2P01877 340 aa17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 MDM2Q00987 491 aaPredicted RBP17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 MAP3K12Q12852 859 aa17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 SHROOM1Q2M3G4 852 aaPredicted RBP17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 OLFML2BQ68BL8 750 aa17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 SHCBP1Q8NEM2 672 aa17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 PIH1D3Q9NQM4 214 aaKnown RBP17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 SLC5A4Q9NY91 659 aa17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 MYH1P12882 1939 aa17.41■□□□□ 0.38
LYSMD3-202ENST00000453259 SURF6O75683 361 aaKnown RBP17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 IDH1O75874 414 aaKnown RBP17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 WDR78Q5VTH9 848 aa17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 MB21D1Q8N884 522 aa17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 HOXC10Q9NYD6 342 aa17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 DBNLQ9UJU6 430 aaKnown RBP17.4■□□□□ 0.38
LYSMD3-202ENST00000453259 SPDYE16A6NNV3 312 aaPredicted RBP17.39■□□□□ 0.37
LYSMD3-202ENST00000453259 CYBAP13498 195 aa17.39■□□□□ 0.37
LYSMD3-202ENST00000453259 ZNF697Q5TEC3 545 aa17.39■□□□□ 0.37
LYSMD3-202ENST00000453259 ABRAQ8N0Z2 381 aa17.39■□□□□ 0.37
LYSMD3-202ENST00000453259 FRAT1Q92837 279 aaPredicted RBP17.39■□□□□ 0.37
LYSMD3-202ENST00000453259 FLRT1Q9NZU1 646 aa17.39■□□□□ 0.37
LYSMD3-202ENST00000453259 KBTBD13C9JR72 458 aa17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 CNGA1P29973 690 aa17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 DYNLL1P63167 89 aaKnown RBP17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 COG2Q14746 738 aa17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 C1orf53Q5VUE5 145 aa17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 GUCD1Q96NT3 240 aa17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 RPAP3Q9H6T3 665 aaPredicted RBP17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 BTBD7Q9P203 1132 aa17.38■□□□□ 0.37
LYSMD3-202ENST00000453259 UNC80Q8N2C7 3258 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 SEPT4O43236 478 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 SHMT1P34896 483 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 RTP1P59025 263 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 SNX17Q15036 470 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 TTF1Q15361 905 aaPredicted RBP17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 DPP9Q86TI2 863 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 ERC1Q8IUD2 1116 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 MAGEB6Q8N7X4 407 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 MIGA1Q8NAN2 632 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 MROH8Q9H579 483 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 NRBP1Q9UHY1 535 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 LTBP2Q14767 1821 aa17.37■□□□□ 0.37
LYSMD3-202ENST00000453259 A0A0G2JMZ2 1700 aa17.36■□□□□ 0.37
LYSMD3-202ENST00000453259 DNAH12Q6ZR08 3092 aa17.36■□□□□ 0.37
LYSMD3-202ENST00000453259 MYO5AQ9Y4I1 1855 aaKnown RBP17.36■□□□□ 0.37
LYSMD3-202ENST00000453259 CCER2I3L3R5 266 aa17.36■□□□□ 0.37
LYSMD3-202ENST00000453259 GABPAQ06546 454 aa17.36■□□□□ 0.37
LYSMD3-202ENST00000453259 TMEM57Q8N5G2 664 aa17.36■□□□□ 0.37
LYSMD3-202ENST00000453259 ACER1Q8TDN7 264 aa17.36■□□□□ 0.37
LYSMD3-202ENST00000453259 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
LYSMD3-202ENST00000453259 TMEM265A0A087WTH1 108 aa17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 ADORA2AP29274 412 aa17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 CYP2C19P33261 490 aa17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 SMAD3P84022 425 aaKnown RBP17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 NPLOC4Q8TAT6 608 aa17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 EAF2Q96CJ1 260 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms