RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ABCB5Q2M3G0 1257 aa16.75■□□□□ 0.27
PTPRE-203ENST00000442830 LBX2Q6XYB7 198 aa16.75■□□□□ 0.27
PTPRE-203ENST00000442830 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
PTPRE-203ENST00000442830 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
PTPRE-203ENST00000442830 KIF1BPQ96EK5 621 aa16.75■□□□□ 0.27
PTPRE-203ENST00000442830 EMILIN3Q9NT22 766 aa16.75■□□□□ 0.27
PTPRE-203ENST00000442830 RBPJLQ9UBG7 517 aa16.75■□□□□ 0.27
PTPRE-203ENST00000442830 OGDHLQ9ULD0 1010 aa16.75■□□□□ 0.27
PTPRE-203ENST00000442830 MAGEB6P1A0A0J9YX57 407 aa16.74■□□□□ 0.27
PTPRE-203ENST00000442830 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
PTPRE-203ENST00000442830 CYP2B6P20813 491 aa16.74■□□□□ 0.27
PTPRE-203ENST00000442830 GPR142Q7Z601 462 aa16.74■□□□□ 0.27
PTPRE-203ENST00000442830 RPAP2Q8IXW5 612 aaPredicted RBP16.74■□□□□ 0.27
PTPRE-203ENST00000442830 PAGR1Q9BTK6 254 aa16.74■□□□□ 0.27
PTPRE-203ENST00000442830 C11orf49Q9H6J7 331 aa16.74■□□□□ 0.27
PTPRE-203ENST00000442830 TXNRD2Q9NNW7 524 aa16.74■□□□□ 0.27
PTPRE-203ENST00000442830 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
PTPRE-203ENST00000442830 BMP8BP34820 402 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 JAG1P78504 1218 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 RAB3GAP1Q15042 981 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 MORN1Q5T089 497 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 CATSPERGQ6ZRH7 1159 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 USP6NLQ92738 828 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 IVNS1ABPQ9Y6Y0 642 aa16.73■□□□□ 0.27
PTPRE-203ENST00000442830 SLC15A5A6NIM6 579 aa16.72■□□□□ 0.27
PTPRE-203ENST00000442830 MSCO60682 206 aa16.72■□□□□ 0.27
PTPRE-203ENST00000442830 RAB11FIP3O75154 756 aa16.72■□□□□ 0.27
PTPRE-203ENST00000442830 MAP2K5Q13163 448 aa16.72■□□□□ 0.27
PTPRE-203ENST00000442830 MFSD14CQ5VZR4 134 aa16.72■□□□□ 0.27
PTPRE-203ENST00000442830 RIOK1Q9BRS2 568 aaKnown RBP16.72■□□□□ 0.27
PTPRE-203ENST00000442830 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
PTPRE-203ENST00000442830 FRMPD3Q5JV73 1810 aa16.72■□□□□ 0.27
PTPRE-203ENST00000442830 MYH7P12883 1935 aa16.72■□□□□ 0.27
PTPRE-203ENST00000442830 ZNF236Q9UL36 1845 aa16.71■□□□□ 0.27
PTPRE-203ENST00000442830 SZT2Q5T011 3432 aa16.71■□□□□ 0.27
PTPRE-203ENST00000442830 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
PTPRE-203ENST00000442830 VCAM1P19320 739 aa16.71■□□□□ 0.27
PTPRE-203ENST00000442830 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.27
PTPRE-203ENST00000442830 GPR153Q6NV75 609 aa16.71■□□□□ 0.27
PTPRE-203ENST00000442830 AMOTL1Q8IY63 956 aa16.71■□□□□ 0.27
PTPRE-203ENST00000442830 DIS3LQ8TF46 1054 aaKnown RBP16.71■□□□□ 0.27
PTPRE-203ENST00000442830 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
PTPRE-203ENST00000442830 SH2D4AQ9H788 454 aa16.71■□□□□ 0.27
PTPRE-203ENST00000442830 PDE6AP16499 860 aa16.7■□□□□ 0.26
PTPRE-203ENST00000442830 CACNB2Q08289 660 aaPredicted RBP16.7■□□□□ 0.26
PTPRE-203ENST00000442830 ZYXQ15942 572 aaKnown RBP16.7■□□□□ 0.26
PTPRE-203ENST00000442830 C7orf61Q8IZ16 206 aa16.7■□□□□ 0.26
PTPRE-203ENST00000442830 MB21D1Q8N884 522 aa16.7■□□□□ 0.26
PTPRE-203ENST00000442830 EDC3Q96F86 508 aaKnown RBP16.7■□□□□ 0.26
PTPRE-203ENST00000442830 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
PTPRE-203ENST00000442830 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTPRE-203ENST00000442830 PORCNQ9H237 461 aa16.7■□□□□ 0.26
PTPRE-203ENST00000442830 MCM9Q9NXL9 1143 aa16.7■□□□□ 0.26
PTPRE-203ENST00000442830 HOXC10Q9NYD6 342 aa16.7■□□□□ 0.26
PTPRE-203ENST00000442830 HOXC6P09630 235 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 SHMT1P34896 483 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 GABPAQ06546 454 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 TRIM32Q13049 653 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
PTPRE-203ENST00000442830 Q3C1V9 767 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 TMEM179Q6ZVK1 233 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 LPAR1Q92633 364 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 GDF15Q99988 308 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 IL1RAPL2Q9NP60 686 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 ATP8A2Q9NTI2 1148 aa16.69■□□□□ 0.26
PTPRE-203ENST00000442830 STRNO43815 780 aa16.68■□□□□ 0.26
PTPRE-203ENST00000442830 PTPREP23469 700 aa16.68■□□□□ 0.26
PTPRE-203ENST00000442830 PLCD1P51178 756 aa16.68■□□□□ 0.26
PTPRE-203ENST00000442830 WDR78Q5VTH9 848 aa16.68■□□□□ 0.26
PTPRE-203ENST00000442830 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
PTPRE-203ENST00000442830 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
PTPRE-203ENST00000442830 SLC5A4Q9NY91 659 aa16.68■□□□□ 0.26
PTPRE-203ENST00000442830 ZNF532Q9HCE3 1301 aa16.68■□□□□ 0.26
PTPRE-203ENST00000442830 SPDYE16A6NNV3 312 aaPredicted RBP16.67■□□□□ 0.26
PTPRE-203ENST00000442830 MNX1P50219 401 aaPredicted RBP16.67■□□□□ 0.26
PTPRE-203ENST00000442830 ATP2B2Q01814 1243 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 GRB14Q14449 540 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 COG2Q14746 738 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 SHCBP1Q8NEM2 672 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 CCDC17Q96LX7 622 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
PTPRE-203ENST00000442830 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 NDUFB9Q9Y6M9 179 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 A0A0G2JMZ2 1700 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 LAMA3Q16787 3333 aa16.67■□□□□ 0.26
PTPRE-203ENST00000442830 GOLIM4O00461 696 aa16.66■□□□□ 0.26
PTPRE-203ENST00000442830 MPHOSPH10O00566 681 aaKnown RBP16.66■□□□□ 0.26
PTPRE-203ENST00000442830 CNMDO75829 334 aa16.66■□□□□ 0.26
PTPRE-203ENST00000442830 COL6A1P12109 1028 aa16.66■□□□□ 0.26
PTPRE-203ENST00000442830 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
PTPRE-203ENST00000442830 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
PTPRE-203ENST00000442830 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
PTPRE-203ENST00000442830 ACER1Q8TDN7 264 aa16.66■□□□□ 0.26
PTPRE-203ENST00000442830 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
PTPRE-203ENST00000442830 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
PTPRE-203ENST00000442830 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms