RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 LOC102724428A0A0B4J2F2 783 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 SIK1P57059 783 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 STIM1Q13586 685 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 SUSD4Q5VX71 490 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 ANO1Q5XXA6 986 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 GSPT2Q8IYD1 628 aaKnown RBP18.98■□□□□ 0.63
PMS1-213ENST00000441310 CD248Q9HCU0 757 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 SEC31BQ9NQW1 1179 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 AKR1B15C9JRZ8 316 aaPredicted RBP18.98■□□□□ 0.63
PMS1-213ENST00000441310 FAM182BQ5T319 152 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 PDIA3P30101 505 aaKnown RBP18.98■□□□□ 0.63
PMS1-213ENST00000441310 AARSP49588 968 aaKnown RBP eCLIP18.98■□□□□ 0.63
PMS1-213ENST00000441310 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 NAPGQ99747 312 aaPredicted RBP18.98■□□□□ 0.63
PMS1-213ENST00000441310 GPHNQ9NQX3 736 aaPredicted RBP18.98■□□□□ 0.63
PMS1-213ENST00000441310 GNL3LQ9NVN8 582 aaKnown RBP18.98■□□□□ 0.63
PMS1-213ENST00000441310 PCDHA5Q9Y5H7 936 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 SALL1Q9NSC2 1324 aa18.98■□□□□ 0.63
PMS1-213ENST00000441310 PAPPAQ13219 1627 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 SHTN1A0MZ66 631 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 IL6STP40189 918 aaPredicted RBP18.97■□□□□ 0.63
PMS1-213ENST00000441310 INTS5Q6P9B9 1019 aaKnown RBP18.97■□□□□ 0.63
PMS1-213ENST00000441310 ACRBPQ8NEB7 543 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 CCDC148Q8NFR7 591 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 CRACR2AQ9BSW2 395 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 PUS7LQ9H0K6 701 aaKnown RBP18.97■□□□□ 0.63
PMS1-213ENST00000441310 IDH1O75874 414 aaKnown RBP18.97■□□□□ 0.63
PMS1-213ENST00000441310 CABS1Q96KC9 395 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 HELLSQ9NRZ9 838 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 CCDC87Q9NVE4 849 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 SH3TC1Q8TE82 1336 aa18.97■□□□□ 0.63
PMS1-213ENST00000441310 GOLGA6CA6NDK9 693 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 KIF28PB7ZC32 967 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 FOXN1O15353 648 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 ECM2O94769 699 aaPredicted RBP18.96■□□□□ 0.63
PMS1-213ENST00000441310 GOLGA6DP0CG33 693 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 MCAMP43121 646 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 ZNF827Q17R98 1081 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
PMS1-213ENST00000441310 GOLGA6AQ9NYA3 693 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 BMP6P22004 513 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 ATP2B2Q01814 1243 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 PTF1AQ7RTS3 328 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 JCADQ9P266 1359 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 PHKA1P46020 1223 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 FMR1Q06787 632 aaKnown RBP eCLIP18.96■□□□□ 0.63
PMS1-213ENST00000441310 WHAMMP3Q1A5X7 153 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 LONRF3Q496Y0 759 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 METTL16Q86W50 562 aaKnown RBP18.96■□□□□ 0.63
PMS1-213ENST00000441310 HINFPQ9BQA5 517 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 VIPAS39Q9H9C1 493 aa18.96■□□□□ 0.63
PMS1-213ENST00000441310 PDE8AO60658 829 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 RDXP35241 583 aaKnown RBP18.95■□□□□ 0.62
PMS1-213ENST00000441310 GNGT1P63211 74 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 TUBB4BP68371 445 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 LRCH2Q5VUJ6 765 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 BICDL1Q6ZP65 573 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 SAMSN1Q9NSI8 373 aaKnown RBP18.95■□□□□ 0.62
PMS1-213ENST00000441310 CAPS2Q9BXY5 557 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 NIP7Q9Y221 180 aaKnown RBP eCLIP18.95■□□□□ 0.62
PMS1-213ENST00000441310 PALLDQ8WX93 1383 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 E7EWF7 191 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 TEX33O43247 280 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 SHOX2O60902 331 aaPredicted RBP18.95■□□□□ 0.62
PMS1-213ENST00000441310 RBL2Q08999 1139 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 WDR93Q6P2C0 686 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 PPFIBP1Q86W92 1011 aa18.95■□□□□ 0.62
PMS1-213ENST00000441310 PRPF38AQ8NAV1 312 aaKnown RBP18.95■□□□□ 0.62
PMS1-213ENST00000441310 SHC4Q6S5L8 630 aa18.94■□□□□ 0.62
PMS1-213ENST00000441310 N4BP2L2Q92802 583 aaPredicted RBP18.94■□□□□ 0.62
PMS1-213ENST00000441310 HOOK1Q9UJC3 728 aaKnown RBP18.94■□□□□ 0.62
PMS1-213ENST00000441310 TUBBP07437 444 aa18.94■□□□□ 0.62
PMS1-213ENST00000441310 TUBB2AQ13885 445 aa18.94■□□□□ 0.62
PMS1-213ENST00000441310 ZNF34Q8IZ26 560 aa18.94■□□□□ 0.62
PMS1-213ENST00000441310 COG1Q8WTW3 980 aa18.94■□□□□ 0.62
PMS1-213ENST00000441310 TUBB2BQ9BVA1 445 aa18.94■□□□□ 0.62
PMS1-213ENST00000441310 MYO6Q9UM54 1294 aa18.94■□□□□ 0.62
PMS1-213ENST00000441310 SLC9C2Q5TAH2 1124 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 ZC3H4Q9UPT8 1303 aaKnown RBP18.93■□□□□ 0.62
PMS1-213ENST00000441310 HMGB1P09429 215 aaKnown RBP18.93■□□□□ 0.62
PMS1-213ENST00000441310 ELF1P32519 619 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 MAP9Q49MG5 647 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 IQSEC3Q9UPP2 1182 aaPredicted RBP18.93■□□□□ 0.62
PMS1-213ENST00000441310 PDE8BO95263 885 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 SPECC1Q5M775 1068 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 DSCC1Q9BVC3 393 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 CENPHQ9H3R5 247 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 SLC24A3Q9HC58 644 aa18.93■□□□□ 0.62
PMS1-213ENST00000441310 COL14A1Q05707 1796 aaKnown RBP18.92■□□□□ 0.62
PMS1-213ENST00000441310 MYO1BO43795 1136 aa18.92■□□□□ 0.62
PMS1-213ENST00000441310 KIAA0754O94854 1291 aa18.92■□□□□ 0.62
PMS1-213ENST00000441310 FGAP02671 866 aa18.92■□□□□ 0.62
PMS1-213ENST00000441310 NEDD9Q14511 834 aa18.92■□□□□ 0.62
PMS1-213ENST00000441310 OTUD6BQ8N6M0 293 aa18.92■□□□□ 0.62
PMS1-213ENST00000441310 COL16A1Q07092 1604 aaPredicted RBP18.92■□□□□ 0.62
PMS1-213ENST00000441310 RIC1Q4ADV7 1423 aa18.92■□□□□ 0.62
PMS1-213ENST00000441310 ZKSCAN4Q969J2 545 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms