RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 CNTNAP1P78357 1384 aa23.55■■□□□ 1.36
VRK2-207ENST00000440705 FDPSP14324 419 aaKnown RBP23.54■■□□□ 1.36
VRK2-207ENST00000440705 IFNAR1P17181 557 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 NOVP48745 357 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 PPP4R3BQ5MIZ7 849 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 PNMA1Q8ND90 353 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 MAP3K14Q99558 947 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 DNAJC18Q9H819 358 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 HERC5Q9UII4 1024 aaKnown RBP23.54■■□□□ 1.36
VRK2-207ENST00000440705 ATP6V1DQ9Y5K8 247 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 H3BQV1 296 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 AKR1B1P15121 316 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 TNFAIP1Q13829 316 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 IFFO2Q5TF58 517 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 TATDN1Q6P1N9 297 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 SAMD7Q7Z3H4 446 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 CTCFLQ8NI51 663 aaPredicted RBP23.54■■□□□ 1.36
VRK2-207ENST00000440705 CEP95Q96GE4 821 aa23.54■■□□□ 1.36
VRK2-207ENST00000440705 BAG4O95429 457 aaKnown RBP23.53■■□□□ 1.36
VRK2-207ENST00000440705 F13A1P00488 732 aa23.53■■□□□ 1.36
VRK2-207ENST00000440705 MCM4P33991 863 aa23.53■■□□□ 1.36
VRK2-207ENST00000440705 SSRP1Q08945 709 aaKnown RBP23.53■■□□□ 1.36
VRK2-207ENST00000440705 KIF4BQ2VIQ3 1234 aa23.53■■□□□ 1.36
VRK2-207ENST00000440705 CERKLQ49MI3 558 aaPredicted RBP23.53■■□□□ 1.36
VRK2-207ENST00000440705 TMEM47Q9BQJ4 181 aa23.53■■□□□ 1.36
VRK2-207ENST00000440705 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.53■■□□□ 1.36
VRK2-207ENST00000440705 MTMR4Q9NYA4 1195 aa23.53■■□□□ 1.36
VRK2-207ENST00000440705 GPRC5DQ9NZD1 345 aa23.53■■□□□ 1.36
VRK2-207ENST00000440705 STK36Q9NRP7 1315 aa23.53■■□□□ 1.36
VRK2-207ENST00000440705 IGKV6D-41A0A0C4DH26 115 aa23.52■■□□□ 1.36
VRK2-207ENST00000440705 EGFRP00533 1210 aa23.52■■□□□ 1.36
VRK2-207ENST00000440705 TOP1P11387 765 aaKnown RBP23.52■■□□□ 1.36
VRK2-207ENST00000440705 KIF5BP33176 963 aa23.52■■□□□ 1.36
VRK2-207ENST00000440705 TBC1D10BQ4KMP7 808 aaPredicted RBP23.52■■□□□ 1.36
VRK2-207ENST00000440705 TRIM22Q8IYM9 498 aa23.52■■□□□ 1.36
VRK2-207ENST00000440705 RGS22Q8NE09 1264 aa23.52■■□□□ 1.36
VRK2-207ENST00000440705 PPFIA3O75145 1194 aa23.51■■□□□ 1.35
VRK2-207ENST00000440705 NBR1Q14596 966 aa23.51■■□□□ 1.35
VRK2-207ENST00000440705 GPR162Q16538 588 aa23.51■■□□□ 1.35
VRK2-207ENST00000440705 MPHOSPH10O00566 681 aaKnown RBP23.51■■□□□ 1.35
VRK2-207ENST00000440705 FMNL1O95466 1100 aaPredicted RBP23.51■■□□□ 1.35
VRK2-207ENST00000440705 C9orf131Q5VYM1 1079 aa23.51■■□□□ 1.35
VRK2-207ENST00000440705 WASF1Q92558 559 aa23.51■■□□□ 1.35
VRK2-207ENST00000440705 PHKBQ93100 1093 aa23.51■■□□□ 1.35
VRK2-207ENST00000440705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.51■■□□□ 1.35
VRK2-207ENST00000440705 FAM196BA6NMK8 535 aa23.5■■□□□ 1.35
VRK2-207ENST00000440705 DDX11L8A8MPP1 907 aa23.5■■□□□ 1.35
VRK2-207ENST00000440705 GOLGA6L22H0YM25 854 aa23.5■■□□□ 1.35
VRK2-207ENST00000440705 CDC37L1Q7L3B6 337 aa23.5■■□□□ 1.35
VRK2-207ENST00000440705 SLC26A6Q9BXS9 759 aa23.5■■□□□ 1.35
VRK2-207ENST00000440705 TMEM39BQ9GZU3 492 aa23.5■■□□□ 1.35
VRK2-207ENST00000440705 TBC1D12O60347 775 aa23.49■■□□□ 1.35
VRK2-207ENST00000440705 TTLL1O95922 423 aa23.49■■□□□ 1.35
VRK2-207ENST00000440705 NBPF11Q86T75 865 aa23.49■■□□□ 1.35
VRK2-207ENST00000440705 C8orf76Q96K31 380 aa23.49■■□□□ 1.35
VRK2-207ENST00000440705 GREB1LQ9C091 1923 aaPredicted RBP23.48■■□□□ 1.35
VRK2-207ENST00000440705 GRIN3BO60391 1043 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 SLURP2P0DP57 97 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 GNAQP50148 359 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 RASA3Q14644 834 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 RNF26Q9BY78 433 aaPredicted RBP23.48■■□□□ 1.35
VRK2-207ENST00000440705 AKAP17AQ02040 695 aaKnown RBP23.48■■□□□ 1.35
VRK2-207ENST00000440705 GRM4Q14833 912 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 TMEM179Q6ZVK1 233 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 TMTC3Q6ZXV5 915 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 ALG1Q9BT22 464 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 KANSL2Q9H9L4 492 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 HACL1Q9UJ83 578 aa23.48■■□□□ 1.35
VRK2-207ENST00000440705 DDNO94850 711 aaPredicted RBP23.47■■□□□ 1.35
VRK2-207ENST00000440705 DEXIO95424 95 aa23.47■■□□□ 1.35
VRK2-207ENST00000440705 PTMSP20962 102 aa23.47■■□□□ 1.35
VRK2-207ENST00000440705 ABCB5Q2M3G0 1257 aa23.47■■□□□ 1.35
VRK2-207ENST00000440705 CCDC82Q8N4S0 544 aa23.47■■□□□ 1.35
VRK2-207ENST00000440705 ZSCAN16Q9H4T2 348 aaPredicted RBP23.47■■□□□ 1.35
VRK2-207ENST00000440705 CLIP2Q9UDT6 1046 aa23.47■■□□□ 1.35
VRK2-207ENST00000440705 PGAP2Q9UHJ9 254 aa23.47■■□□□ 1.35
VRK2-207ENST00000440705 LMOD1P29536 600 aaPredicted RBP23.46■■□□□ 1.35
VRK2-207ENST00000440705 CMTR1Q8N1G2 835 aaKnown RBP23.46■■□□□ 1.35
VRK2-207ENST00000440705 FBXO18Q8NFZ0 1043 aa23.46■■□□□ 1.35
VRK2-207ENST00000440705 CABP5Q9NP86 173 aa23.46■■□□□ 1.35
VRK2-207ENST00000440705 PRPF3O43395 683 aaKnown RBP23.45■■□□□ 1.34
VRK2-207ENST00000440705 MAP3K10Q02779 954 aa23.45■■□□□ 1.34
VRK2-207ENST00000440705 FUT2Q10981 343 aa23.45■■□□□ 1.34
VRK2-207ENST00000440705 DPY19L2Q6NUT2 758 aa23.45■■□□□ 1.34
VRK2-207ENST00000440705 PLEKHA8P1O95397 391 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 EPS15P42566 896 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 FOSBP53539 338 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 TRIM29Q14134 588 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 MCTP1Q6DN14 999 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 APOBEC3FQ8IUX4 373 aaKnown RBP23.44■■□□□ 1.34
VRK2-207ENST00000440705 LZTS2Q9BRK4 669 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 NYAP2Q9P242 653 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 FERMT3Q86UX7 667 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 SRBD1Q8N5C6 995 aaKnown RBP23.44■■□□□ 1.34
VRK2-207ENST00000440705 TRPM4Q8TD43 1214 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 RBM27Q9P2N5 1060 aaKnown RBP23.44■■□□□ 1.34
VRK2-207ENST00000440705 MAD2L2Q9UI95 211 aa23.44■■□□□ 1.34
VRK2-207ENST00000440705 ZC3H4Q9UPT8 1303 aaKnown RBP23.43■■□□□ 1.34
VRK2-207ENST00000440705 PALM3A6NDB9 673 aaPredicted RBP23.43■■□□□ 1.34
VRK2-207ENST00000440705 PARP1P09874 1014 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms