RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 FOXP2O15409 715 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 PRMT2P55345 433 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 RAB3GAP1Q15042 981 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 MCMDC2Q4G0Z9 681 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 VPS53Q5VIR6 699 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 ZNF589Q86UQ0 364 aaPredicted RBP21.11■□□□□ 0.97
CCDC188-201ENST00000439765 IFNL3Q8IZI9 196 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 NACAP1Q9BZK3 213 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 NAPBQ9H115 298 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 AS3MTQ9HBK9 375 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 SWAP70Q9UH65 585 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 CPA4Q9UI42 421 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 SLC45A1Q9Y2W3 748 aa21.11■□□□□ 0.97
CCDC188-201ENST00000439765 ROBO3Q96MS0 1386 aa21.1■□□□□ 0.97
CCDC188-201ENST00000439765 PATL2C9JE40 543 aaKnown RBP21.1■□□□□ 0.97
CCDC188-201ENST00000439765 MPHOSPH10O00566 681 aaKnown RBP21.1■□□□□ 0.97
CCDC188-201ENST00000439765 MTMR2Q13614 643 aa21.1■□□□□ 0.97
CCDC188-201ENST00000439765 CWC27Q6UX04 472 aaKnown RBP21.1■□□□□ 0.97
CCDC188-201ENST00000439765 C16orf86Q6ZW13 317 aa21.1■□□□□ 0.97
CCDC188-201ENST00000439765 TICAM2Q86XR7 235 aa21.1■□□□□ 0.97
CCDC188-201ENST00000439765 ZNF333Q96JL9 665 aa21.1■□□□□ 0.97
CCDC188-201ENST00000439765 CCDC171Q6TFL3 1326 aa21.09■□□□□ 0.97
CCDC188-201ENST00000439765 MKI67P46013 3256 aaKnown RBP21.09■□□□□ 0.97
CCDC188-201ENST00000439765 BCRP11274 1271 aa21.09■□□□□ 0.97
CCDC188-201ENST00000439765 HMGCS2P54868 508 aa21.09■□□□□ 0.97
CCDC188-201ENST00000439765 SBK1Q52WX2 424 aa21.09■□□□□ 0.97
CCDC188-201ENST00000439765 TBC1D2Q9BYX2 928 aa21.09■□□□□ 0.97
CCDC188-201ENST00000439765 GINM1Q9NU53 330 aa21.09■□□□□ 0.97
CCDC188-201ENST00000439765 POTEFA5A3E0 1075 aa21.08■□□□□ 0.97
CCDC188-201ENST00000439765 CTGFP29279 349 aa21.08■□□□□ 0.97
CCDC188-201ENST00000439765 CDK8P49336 464 aa21.08■□□□□ 0.97
CCDC188-201ENST00000439765 SLC9C1Q4G0N8 1177 aa21.08■□□□□ 0.97
CCDC188-201ENST00000439765 CABP5Q9NP86 173 aa21.08■□□□□ 0.97
CCDC188-201ENST00000439765 MYH4Q9Y623 1939 aa21.08■□□□□ 0.97
CCDC188-201ENST00000439765 CYP2C8P10632 490 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 AKR1B1P15121 316 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 NBPF11Q86T75 865 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 WDR18Q9BV38 432 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 HIP1O00291 1037 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 SEPT2Q15019 361 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 TREML2Q5T2D2 321 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 CLEC10AQ8IUN9 316 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 FEZ1Q99689 392 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 TAOK2Q9UL54 1235 aa21.07■□□□□ 0.96
CCDC188-201ENST00000439765 GUCY1A2P33402 732 aa21.06■□□□□ 0.96
CCDC188-201ENST00000439765 PSMC4P43686 418 aa21.06■□□□□ 0.96
CCDC188-201ENST00000439765 ZYXQ15942 572 aaKnown RBP21.06■□□□□ 0.96
CCDC188-201ENST00000439765 TRIM47Q96LD4 638 aa21.06■□□□□ 0.96
CCDC188-201ENST00000439765 SRRDQ9UH36 339 aa21.06■□□□□ 0.96
CCDC188-201ENST00000439765 AGTPBP1Q9UPW5 1226 aa21.06■□□□□ 0.96
CCDC188-201ENST00000439765 USP17L10C9JJH3 530 aa21.05■□□□□ 0.96
CCDC188-201ENST00000439765 HSPD1P10809 573 aaKnown RBP21.05■□□□□ 0.96
CCDC188-201ENST00000439765 BACE1P56817 501 aa21.05■□□□□ 0.96
CCDC188-201ENST00000439765 PPARAQ07869 468 aa21.05■□□□□ 0.96
CCDC188-201ENST00000439765 TMEM179Q6ZVK1 233 aa21.05■□□□□ 0.96
CCDC188-201ENST00000439765 PROCA1Q8NCQ7 364 aaPredicted RBP21.05■□□□□ 0.96
CCDC188-201ENST00000439765 CEP290O15078 2479 aa21.04■□□□□ 0.96
CCDC188-201ENST00000439765 PRDM1O75626 825 aa21.04■□□□□ 0.96
CCDC188-201ENST00000439765 OSBPP22059 807 aa21.04■□□□□ 0.96
CCDC188-201ENST00000439765 HOXD10P28358 340 aa21.04■□□□□ 0.96
CCDC188-201ENST00000439765 PRPF38BQ5VTL8 546 aaKnown RBP21.04■□□□□ 0.96
CCDC188-201ENST00000439765 MKNK2Q9HBH9 465 aa21.04■□□□□ 0.96
CCDC188-201ENST00000439765 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
CCDC188-201ENST00000439765 BMP2KLQ5H9B9 411 aa21.03■□□□□ 0.96
CCDC188-201ENST00000439765 ACER1Q8TDN7 264 aa21.03■□□□□ 0.96
CCDC188-201ENST00000439765 TMEM106CQ9BVX2 250 aa21.03■□□□□ 0.96
CCDC188-201ENST00000439765 IL25Q9H293 177 aa21.03■□□□□ 0.96
CCDC188-201ENST00000439765 TMOD4Q9NZQ9 345 aa21.03■□□□□ 0.96
CCDC188-201ENST00000439765 FMNL1O95466 1100 aaPredicted RBP21.02■□□□□ 0.96
CCDC188-201ENST00000439765 RASA1P20936 1047 aa21.02■□□□□ 0.96
CCDC188-201ENST00000439765 ICA1Q05084 483 aa21.02■□□□□ 0.96
CCDC188-201ENST00000439765 CTDSPL2Q05D32 466 aa21.02■□□□□ 0.96
CCDC188-201ENST00000439765 SH3D19Q5HYK7 790 aa21.02■□□□□ 0.96
CCDC188-201ENST00000439765 CCDC17Q96LX7 622 aa21.02■□□□□ 0.96
CCDC188-201ENST00000439765 PNMA3Q9UL41 463 aa21.02■□□□□ 0.96
CCDC188-201ENST00000439765 MYPNQ86TC9 1320 aa21.02■□□□□ 0.96
CCDC188-201ENST00000439765 FCGRTP55899 365 aa21.01■□□□□ 0.95
CCDC188-201ENST00000439765 SMCR8Q8TEV9 937 aaPredicted RBP21.01■□□□□ 0.95
CCDC188-201ENST00000439765 SH3TC2Q8TF17 1288 aa21.01■□□□□ 0.95
CCDC188-201ENST00000439765 ZMYM6O95789 1325 aa21.01■□□□□ 0.95
CCDC188-201ENST00000439765 PARP14Q460N5 1801 aa21.01■□□□□ 0.95
CCDC188-201ENST00000439765 C19orf81C9J6K1 198 aa21.01■□□□□ 0.95
CCDC188-201ENST00000439765 ECM2O94769 699 aaPredicted RBP21.01■□□□□ 0.95
CCDC188-201ENST00000439765 FGAP02671 866 aa21.01■□□□□ 0.95
CCDC188-201ENST00000439765 SLC3A2P08195 630 aaKnown RBP21.01■□□□□ 0.95
CCDC188-201ENST00000439765 EN2P19622 333 aaPredicted RBP21.01■□□□□ 0.95
CCDC188-201ENST00000439765 A0A1W2PRG0 241 aa21■□□□□ 0.95
CCDC188-201ENST00000439765 CHMLP26374 656 aa21■□□□□ 0.95
CCDC188-201ENST00000439765 HAND2P61296 217 aa21■□□□□ 0.95
CCDC188-201ENST00000439765 PDE4BQ07343 736 aa21■□□□□ 0.95
CCDC188-201ENST00000439765 ALX1Q15699 326 aa21■□□□□ 0.95
CCDC188-201ENST00000439765 USP17L2Q6R6M4 530 aa21■□□□□ 0.95
CCDC188-201ENST00000439765 ZNF287Q9HBT7 754 aa21■□□□□ 0.95
CCDC188-201ENST00000439765 EMILIN3Q9NT22 766 aa21■□□□□ 0.95
CCDC188-201ENST00000439765 RAD50Q92878 1312 aa20.99■□□□□ 0.95
CCDC188-201ENST00000439765 ATP2B2Q01814 1243 aa20.99■□□□□ 0.95
CCDC188-201ENST00000439765 RAET1EQ8TD07 263 aa20.99■□□□□ 0.95
CCDC188-201ENST00000439765 KIAA1683Q9H0B3 1180 aa20.99■□□□□ 0.95
CCDC188-201ENST00000439765 PLXNB2O15031 1838 aa20.99■□□□□ 0.95
CCDC188-201ENST00000439765 GRK4P32298 578 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms