RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 MINDY4BA8MYZ0 360 aa28.75■■■□□ 2.19
CPNE1-217ENST00000439669 FMNL1O95466 1100 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-217ENST00000439669 SBK1Q52WX2 424 aa28.75■■■□□ 2.19
CPNE1-217ENST00000439669 TMEM179Q6ZVK1 233 aa28.75■■■□□ 2.19
CPNE1-217ENST00000439669 PLEKHM2Q8IWE5 1019 aa28.75■■■□□ 2.19
CPNE1-217ENST00000439669 ANKRD13CQ8N6S4 541 aa28.75■■■□□ 2.19
CPNE1-217ENST00000439669 GNRH1P01148 92 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 AKR1B1P15121 316 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 CTGFP29279 349 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 USP14P54578 494 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 STK11IPQ8N1F8 1099 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 TRIM47Q96LD4 638 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 CCDC17Q96LX7 622 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 NACAP1Q9BZK3 213 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 KIAA1683Q9H0B3 1180 aa28.74■■■□□ 2.19
CPNE1-217ENST00000439669 PATL2C9JE40 543 aaKnown RBP28.73■■■□□ 2.19
CPNE1-217ENST00000439669 GCLCP48506 637 aaPredicted RBP28.73■■■□□ 2.19
CPNE1-217ENST00000439669 FCGRTP55899 365 aa28.73■■■□□ 2.19
CPNE1-217ENST00000439669 CCDC129Q6ZRS4 1044 aa28.73■■■□□ 2.19
CPNE1-217ENST00000439669 RILPL2Q969X0 211 aa28.73■■■□□ 2.19
CPNE1-217ENST00000439669 PTCH2Q9Y6C5 1203 aa28.73■■■□□ 2.19
CPNE1-217ENST00000439669 HOXA7P31268 230 aaPredicted RBP28.72■■■□□ 2.19
CPNE1-217ENST00000439669 SOX10P56693 466 aa28.72■■■□□ 2.19
CPNE1-217ENST00000439669 C12orf42Q96LP6 360 aa28.72■■■□□ 2.19
CPNE1-217ENST00000439669 HOXD10P28358 340 aa28.71■■■□□ 2.19
CPNE1-217ENST00000439669 FAM110CQ1W6H9 321 aa28.71■■■□□ 2.19
CPNE1-217ENST00000439669 IFNL3Q8IZI9 196 aa28.71■■■□□ 2.19
CPNE1-217ENST00000439669 OSBPL3Q9H4L5 887 aa28.71■■■□□ 2.19
CPNE1-217ENST00000439669 ICA1Q05084 483 aa28.7■■■□□ 2.18
CPNE1-217ENST00000439669 CLEC10AQ8IUN9 316 aa28.7■■■□□ 2.18
CPNE1-217ENST00000439669 NAPBQ9H115 298 aa28.7■■■□□ 2.18
CPNE1-217ENST00000439669 ROBO3Q96MS0 1386 aa28.7■■■□□ 2.18
CPNE1-217ENST00000439669 PRMT2P55345 433 aa28.69■■■□□ 2.18
CPNE1-217ENST00000439669 P2RX7Q99572 595 aaKnown RBP28.69■■■□□ 2.18
CPNE1-217ENST00000439669 MKNK2Q9HBH9 465 aa28.69■■■□□ 2.18
CPNE1-217ENST00000439669 ARHGEF10LQ9HCE6 1279 aa28.69■■■□□ 2.18
CPNE1-217ENST00000439669 SRRDQ9UH36 339 aa28.69■■■□□ 2.18
CPNE1-217ENST00000439669 VCAM1P19320 739 aa28.68■■■□□ 2.18
CPNE1-217ENST00000439669 SLC9C1Q4G0N8 1177 aa28.68■■■□□ 2.18
CPNE1-217ENST00000439669 FAM227BQ96M60 508 aa28.68■■■□□ 2.18
CPNE1-217ENST00000439669 HELLSQ9NRZ9 838 aa28.68■■■□□ 2.18
CPNE1-217ENST00000439669 MYPNQ86TC9 1320 aa28.68■■■□□ 2.18
CPNE1-217ENST00000439669 A0A1W2PRG0 241 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L15C9J2P7 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L13C9JLJ4 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L11C9JVI0 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L18D6R9N7 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L22D6RA61 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L17D6RBQ6 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L19D6RCP7 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L20D6RJB6 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 TNPO2O14787 897 aaKnown RBP28.67■■■□□ 2.18
CPNE1-217ENST00000439669 HERVK_113P62684 666 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 USP17L24Q0WX57 530 aa28.67■■■□□ 2.18
CPNE1-217ENST00000439669 MGAMO43451 1857 aa28.66■■■□□ 2.18
CPNE1-217ENST00000439669 A0A0D9SFI3 127 aa28.66■■■□□ 2.18
CPNE1-217ENST00000439669 ATP2B2Q01814 1243 aa28.66■■■□□ 2.18
CPNE1-217ENST00000439669 TICAM2Q86XR7 235 aa28.66■■■□□ 2.18
CPNE1-217ENST00000439669 RAET1EQ8TD07 263 aa28.66■■■□□ 2.18
CPNE1-217ENST00000439669 SH2D4AQ9H788 454 aa28.66■■■□□ 2.18
CPNE1-217ENST00000439669 RASA1P20936 1047 aa28.65■■■□□ 2.18
CPNE1-217ENST00000439669 NMIQ13287 307 aaPredicted RBP28.65■■■□□ 2.18
CPNE1-217ENST00000439669 ARMC5Q96C12 935 aa28.65■■■□□ 2.18
CPNE1-217ENST00000439669 RPAP3Q9H6T3 665 aaPredicted RBP28.65■■■□□ 2.18
CPNE1-217ENST00000439669 ZNF287Q9HBT7 754 aa28.65■■■□□ 2.18
CPNE1-217ENST00000439669 PRKCZQ05513 592 aa28.64■■■□□ 2.18
CPNE1-217ENST00000439669 MCMDC2Q4G0Z9 681 aa28.64■■■□□ 2.18
CPNE1-217ENST00000439669 GTF3C2Q8WUA4 911 aaPredicted RBP28.64■■■□□ 2.18
CPNE1-217ENST00000439669 KANSL2Q9H9L4 492 aa28.64■■■□□ 2.18
CPNE1-217ENST00000439669 MORF4L1Q9UBU8 362 aa28.64■■■□□ 2.18
CPNE1-217ENST00000439669 PRDM1O75626 825 aa28.63■■■□□ 2.17
CPNE1-217ENST00000439669 SLC3A2P08195 630 aaKnown RBP28.63■■■□□ 2.17
CPNE1-217ENST00000439669 PDE4AP27815 886 aa28.63■■■□□ 2.17
CPNE1-217ENST00000439669 PPARAQ07869 468 aa28.63■■■□□ 2.17
CPNE1-217ENST00000439669 VPS53Q5VIR6 699 aa28.63■■■□□ 2.17
CPNE1-217ENST00000439669 CATSPERGQ6ZRH7 1159 aa28.63■■■□□ 2.17
CPNE1-217ENST00000439669 NBPF11Q86T75 865 aa28.63■■■□□ 2.17
CPNE1-217ENST00000439669 PAGR1Q9BTK6 254 aa28.63■■■□□ 2.17
CPNE1-217ENST00000439669 TMX2Q9Y320 296 aa28.63■■■□□ 2.17
CPNE1-217ENST00000439669 FOXP2O15409 715 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 PEX10O60683 326 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 EEF2P13639 858 aaKnown RBP28.62■■■□□ 2.17
CPNE1-217ENST00000439669 SDSP20132 328 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 SIAH1Q8IUQ4 282 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 ZNF444Q8N0Y2 327 aaPredicted RBP28.62■■■□□ 2.17
CPNE1-217ENST00000439669 GPRC5AQ8NFJ5 357 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 SH3TC2Q8TF17 1288 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 COA7Q96BR5 231 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 TXNRD2Q9NNW7 524 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 GABRQQ9UN88 632 aa28.62■■■□□ 2.17
CPNE1-217ENST00000439669 TANGO6Q9C0B7 1094 aa28.61■■■□□ 2.17
CPNE1-217ENST00000439669 RGS19P49795 217 aa28.6■■■□□ 2.17
CPNE1-217ENST00000439669 PDE4BQ07343 736 aa28.6■■■□□ 2.17
CPNE1-217ENST00000439669 ZNF589Q86UQ0 364 aaPredicted RBP28.6■■■□□ 2.17
CPNE1-217ENST00000439669 SPICE1Q8N0Z3 855 aa28.6■■■□□ 2.17
CPNE1-217ENST00000439669 LPAR1Q92633 364 aa28.6■■■□□ 2.17
CPNE1-217ENST00000439669 ZNF333Q96JL9 665 aa28.6■■■□□ 2.17
CPNE1-217ENST00000439669 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.6■■■□□ 2.17
CPNE1-217ENST00000439669 VCPKMTQ9H867 229 aa28.6■■■□□ 2.17
CPNE1-217ENST00000439669 DIAPH3Q9NSV4 1193 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms