RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 PSMC4P43686 418 aa24.54■■□□□ 1.52
UBE2F-212ENST00000439338 TDO2P48775 406 aa24.54■■□□□ 1.52
UBE2F-212ENST00000439338 SBK1Q52WX2 424 aa24.54■■□□□ 1.52
UBE2F-212ENST00000439338 APPP05067 770 aa24.53■■□□□ 1.52
UBE2F-212ENST00000439338 CCDC129Q6ZRS4 1044 aa24.53■■□□□ 1.52
UBE2F-212ENST00000439338 TMEM179Q6ZVK1 233 aa24.53■■□□□ 1.52
UBE2F-212ENST00000439338 TRIM47Q96LD4 638 aa24.53■■□□□ 1.52
UBE2F-212ENST00000439338 MINDY4BA8MYZ0 360 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 TRIM6-TRIM34B2RNG4 842 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 PATL2C9JE40 543 aaKnown RBP24.52■■□□□ 1.52
UBE2F-212ENST00000439338 HOXA7P31268 230 aaPredicted RBP24.52■■□□□ 1.52
UBE2F-212ENST00000439338 USP14P54578 494 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 IRX3P78415 501 aaPredicted RBP24.52■■□□□ 1.52
UBE2F-212ENST00000439338 ANKRD13CQ8N6S4 541 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 C12orf42Q96LP6 360 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 KIAA1683Q9H0B3 1180 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 OSBPL3Q9H4L5 887 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 PTCH2Q9Y6C5 1203 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 ROBO3Q96MS0 1386 aa24.52■■□□□ 1.52
UBE2F-212ENST00000439338 FMNL1O95466 1100 aaPredicted RBP24.51■■□□□ 1.51
UBE2F-212ENST00000439338 GNRH1P01148 92 aa24.51■■□□□ 1.51
UBE2F-212ENST00000439338 IFNL3Q8IZI9 196 aa24.51■■□□□ 1.51
UBE2F-212ENST00000439338 STK11IPQ8N1F8 1099 aa24.51■■□□□ 1.51
UBE2F-212ENST00000439338 GCLCP48506 637 aaPredicted RBP24.5■■□□□ 1.51
UBE2F-212ENST00000439338 FCGRTP55899 365 aa24.5■■□□□ 1.51
UBE2F-212ENST00000439338 SOX10P56693 466 aa24.5■■□□□ 1.51
UBE2F-212ENST00000439338 FAM110CQ1W6H9 321 aa24.5■■□□□ 1.51
UBE2F-212ENST00000439338 CLEC10AQ8IUN9 316 aa24.5■■□□□ 1.51
UBE2F-212ENST00000439338 RILPL2Q969X0 211 aa24.5■■□□□ 1.51
UBE2F-212ENST00000439338 CCDC17Q96LX7 622 aa24.5■■□□□ 1.51
UBE2F-212ENST00000439338 NACAP1Q9BZK3 213 aa24.5■■□□□ 1.51
UBE2F-212ENST00000439338 A0A1W2PRG0 241 aa24.49■■□□□ 1.51
UBE2F-212ENST00000439338 P2RX7Q99572 595 aaKnown RBP24.49■■□□□ 1.51
UBE2F-212ENST00000439338 ICA1Q05084 483 aa24.48■■□□□ 1.51
UBE2F-212ENST00000439338 FAM227BQ96M60 508 aa24.48■■□□□ 1.51
UBE2F-212ENST00000439338 GREB1LQ9C091 1923 aaPredicted RBP24.48■■□□□ 1.51
UBE2F-212ENST00000439338 NAPBQ9H115 298 aa24.48■■□□□ 1.51
UBE2F-212ENST00000439338 HELLSQ9NRZ9 838 aa24.48■■□□□ 1.51
UBE2F-212ENST00000439338 SRRDQ9UH36 339 aa24.48■■□□□ 1.51
UBE2F-212ENST00000439338 MYPNQ86TC9 1320 aa24.47■■□□□ 1.51
UBE2F-212ENST00000439338 A0A0D9SFI3 127 aa24.47■■□□□ 1.51
UBE2F-212ENST00000439338 VCAM1P19320 739 aa24.47■■□□□ 1.51
UBE2F-212ENST00000439338 PDE4AP27815 886 aa24.47■■□□□ 1.51
UBE2F-212ENST00000439338 HOXD10P28358 340 aa24.47■■□□□ 1.51
UBE2F-212ENST00000439338 PRMT2P55345 433 aa24.47■■□□□ 1.51
UBE2F-212ENST00000439338 HERVK_113P62684 666 aa24.47■■□□□ 1.51
UBE2F-212ENST00000439338 FOXP2O15409 715 aa24.46■■□□□ 1.51
UBE2F-212ENST00000439338 RASA1P20936 1047 aa24.46■■□□□ 1.51
UBE2F-212ENST00000439338 NMIQ13287 307 aaPredicted RBP24.46■■□□□ 1.51
UBE2F-212ENST00000439338 TICAM2Q86XR7 235 aa24.46■■□□□ 1.51
UBE2F-212ENST00000439338 ARMC5Q96C12 935 aa24.46■■□□□ 1.51
UBE2F-212ENST00000439338 MKNK2Q9HBH9 465 aa24.46■■□□□ 1.51
UBE2F-212ENST00000439338 ARHGEF10LQ9HCE6 1279 aa24.46■■□□□ 1.51
UBE2F-212ENST00000439338 DOCK3Q8IZD9 2030 aa24.45■■□□□ 1.51
UBE2F-212ENST00000439338 USP17L15C9J2P7 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 USP17L13C9JLJ4 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 USP17L11C9JVI0 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 USP17L18D6R9N7 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 USP17L22D6RA61 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 USP17L17D6RBQ6 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 USP17L19D6RCP7 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 USP17L20D6RJB6 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 USP17L24Q0WX57 530 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 SLC9C1Q4G0N8 1177 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 VPS53Q5VIR6 699 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 SIAH1Q8IUQ4 282 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 MORF4L1Q9UBU8 362 aa24.45■■□□□ 1.5
UBE2F-212ENST00000439338 CENPFP49454 3210 aa24.44■■□□□ 1.5
UBE2F-212ENST00000439338 TNPO2O14787 897 aaKnown RBP24.44■■□□□ 1.5
UBE2F-212ENST00000439338 PEX10O60683 326 aa24.44■■□□□ 1.5
UBE2F-212ENST00000439338 PRKCZQ05513 592 aa24.44■■□□□ 1.5
UBE2F-212ENST00000439338 MCMDC2Q4G0Z9 681 aa24.44■■□□□ 1.5
UBE2F-212ENST00000439338 CATSPERGQ6ZRH7 1159 aa24.44■■□□□ 1.5
UBE2F-212ENST00000439338 RPAP3Q9H6T3 665 aaPredicted RBP24.44■■□□□ 1.5
UBE2F-212ENST00000439338 TXNRD2Q9NNW7 524 aa24.44■■□□□ 1.5
UBE2F-212ENST00000439338 PRDM1O75626 825 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 SDSP20132 328 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 ATP2B2Q01814 1243 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 PPARAQ07869 468 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 KIAA1755Q5JYT7 1200 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 RAET1EQ8TD07 263 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 GTF3C2Q8WUA4 911 aaPredicted RBP24.43■■□□□ 1.5
UBE2F-212ENST00000439338 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.43■■□□□ 1.5
UBE2F-212ENST00000439338 SH2D4AQ9H788 454 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 GABRQQ9UN88 632 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 TMX2Q9Y320 296 aa24.43■■□□□ 1.5
UBE2F-212ENST00000439338 EEF2P13639 858 aaKnown RBP24.42■■□□□ 1.5
UBE2F-212ENST00000439338 RGS19P49795 217 aa24.42■■□□□ 1.5
UBE2F-212ENST00000439338 ZNF589Q86UQ0 364 aaPredicted RBP24.42■■□□□ 1.5
UBE2F-212ENST00000439338 SH3TC2Q8TF17 1288 aa24.42■■□□□ 1.5
UBE2F-212ENST00000439338 ZNF333Q96JL9 665 aa24.42■■□□□ 1.5
UBE2F-212ENST00000439338 PAGR1Q9BTK6 254 aa24.42■■□□□ 1.5
UBE2F-212ENST00000439338 KANSL2Q9H9L4 492 aa24.42■■□□□ 1.5
UBE2F-212ENST00000439338 POTEEQ6S8J3 1075 aa24.41■■□□□ 1.5
UBE2F-212ENST00000439338 VCPKMTQ9H867 229 aa24.41■■□□□ 1.5
UBE2F-212ENST00000439338 ZNF287Q9HBT7 754 aa24.41■■□□□ 1.5
UBE2F-212ENST00000439338 RBPJLQ9UBG7 517 aa24.41■■□□□ 1.5
UBE2F-212ENST00000439338 CCDC171Q6TFL3 1326 aa24.4■■□□□ 1.5
UBE2F-212ENST00000439338 SLC3A2P08195 630 aaKnown RBP24.4■■□□□ 1.5
UBE2F-212ENST00000439338 NBPF11Q86T75 865 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms