RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 IQSEC3Q9UPP2 1182 aaPredicted RBP14.3□□□□□ -0.12
RTN4-211ENST00000438462 VPS13AQ96RL7 3174 aa14.3□□□□□ -0.12
RTN4-211ENST00000438462 H0Y858 1186 aa14.29□□□□□ -0.12
RTN4-211ENST00000438462 FGBP02675 491 aa14.29□□□□□ -0.12
RTN4-211ENST00000438462 HOXC6P09630 235 aa14.29□□□□□ -0.12
RTN4-211ENST00000438462 HIBADHP31937 336 aaKnown RBP14.29□□□□□ -0.12
RTN4-211ENST00000438462 ZNF280CQ8ND82 737 aa14.29□□□□□ -0.12
RTN4-211ENST00000438462 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
RTN4-211ENST00000438462 TLR9Q9NR96 1032 aa14.29□□□□□ -0.12
RTN4-211ENST00000438462 BABAM1Q9NWV8 329 aa14.29□□□□□ -0.12
RTN4-211ENST00000438462 SLC4A7Q9Y6M7 1214 aa14.29□□□□□ -0.12
RTN4-211ENST00000438462 MAST3O60307 1309 aa14.29□□□□□ -0.12
RTN4-211ENST00000438462 TMEM221A6NGB7 291 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 M0R296 226 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 PLIN1O60240 522 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 LPXNO60711 386 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 IGHA2P01877 340 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 IRS1P35568 1242 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 TMEM67Q5HYA8 995 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 WDR78Q5VTH9 848 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 CDC42EP5Q6NZY7 148 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 HHIPL2Q6UWX4 724 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 ADSSL1Q8N142 457 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 METTL22Q9BUU2 404 aaPredicted RBP14.28□□□□□ -0.12
RTN4-211ENST00000438462 MRIQ9BWK5 157 aa14.28□□□□□ -0.12
RTN4-211ENST00000438462 SLC15A5A6NIM6 579 aa14.27□□□□□ -0.13
RTN4-211ENST00000438462 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
RTN4-211ENST00000438462 PER1O15534 1290 aaPredicted RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 GLRX3O76003 335 aaKnown RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 ARHGEF15O94989 841 aa14.27□□□□□ -0.13
RTN4-211ENST00000438462 HOXB3P14651 431 aaPredicted RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 ATP2A2P16615 1042 aaKnown RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 VCPP55072 806 aaKnown RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 HERC4Q5GLZ8 1057 aaPredicted RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 UPF3BQ9BZI7 483 aaKnown RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 XPNPEP3Q9NQH7 507 aa14.27□□□□□ -0.13
RTN4-211ENST00000438462 MAP1BP46821 2468 aaKnown RBP14.27□□□□□ -0.13
RTN4-211ENST00000438462 ZNF236Q9UL36 1845 aa14.27□□□□□ -0.13
RTN4-211ENST00000438462 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 PTPREP23469 700 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 GRB14Q14449 540 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 SH3D19Q5HYK7 790 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 UBE3BQ7Z3V4 1068 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 FBXL6Q8N531 539 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 EDAQ92838 391 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 FAM84BQ96KN1 310 aaPredicted RBP14.26□□□□□ -0.13
RTN4-211ENST00000438462 STARD7Q9NQZ5 370 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 GVINP1Q7Z2Y8 2422 aa14.26□□□□□ -0.13
RTN4-211ENST00000438462 ZBBXA8MT70 800 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 PGK1P00558 417 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 IGKV5-2P06315 115 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 CYP2C18P33260 490 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 TAP1Q03518 808 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 PUS10Q3MIT2 529 aaKnown RBP14.25□□□□□ -0.13
RTN4-211ENST00000438462 SPRED2Q7Z698 418 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 RNF180Q86T96 592 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 GDPD5Q8WTR4 605 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 PRKAG3Q9UGI9 489 aa14.25□□□□□ -0.13
RTN4-211ENST00000438462 SETXQ7Z333 2677 aaKnown RBP14.24□□□□□ -0.13
RTN4-211ENST00000438462 HOXB7P09629 217 aa14.24□□□□□ -0.13
RTN4-211ENST00000438462 HOXA7P31268 230 aaPredicted RBP14.24□□□□□ -0.13
RTN4-211ENST00000438462 NBL1P41271 181 aa14.24□□□□□ -0.13
RTN4-211ENST00000438462 PRAMEF19Q5SWL8 479 aa14.24□□□□□ -0.13
RTN4-211ENST00000438462 SH3BP5LQ7L8J4 393 aa14.24□□□□□ -0.13
RTN4-211ENST00000438462 ADHFE1Q8IWW8 467 aa14.24□□□□□ -0.13
RTN4-211ENST00000438462 MROH7Q68CQ1 1323 aa14.23□□□□□ -0.13
RTN4-211ENST00000438462 H3BQ06 376 aaPredicted RBP14.23□□□□□ -0.13
RTN4-211ENST00000438462 MAP3K10Q02779 954 aa14.23□□□□□ -0.13
RTN4-211ENST00000438462 MTMR2Q13614 643 aa14.23□□□□□ -0.13
RTN4-211ENST00000438462 OLFML2BQ68BL8 750 aa14.23□□□□□ -0.13
RTN4-211ENST00000438462 TRIM67Q6ZTA4 783 aa14.23□□□□□ -0.13
RTN4-211ENST00000438462 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
RTN4-211ENST00000438462 PLEKHF1Q96S99 279 aa14.23□□□□□ -0.13
RTN4-211ENST00000438462 IVNS1ABPQ9Y6Y0 642 aa14.23□□□□□ -0.13
RTN4-211ENST00000438462 USP24Q9UPU5 2620 aa14.23□□□□□ -0.13
RTN4-211ENST00000438462 KDM4AO75164 1064 aa14.22□□□□□ -0.13
RTN4-211ENST00000438462 CSF1RP07333 972 aa14.22□□□□□ -0.13
RTN4-211ENST00000438462 RARBP10826 455 aa14.22□□□□□ -0.13
RTN4-211ENST00000438462 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
RTN4-211ENST00000438462 GTF3C2Q8WUA4 911 aaPredicted RBP14.22□□□□□ -0.13
RTN4-211ENST00000438462 PLA2G12BQ9BX93 195 aa14.22□□□□□ -0.13
RTN4-211ENST00000438462 TBC1D2Q9BYX2 928 aa14.22□□□□□ -0.13
RTN4-211ENST00000438462 MYH13Q9UKX3 1938 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 SMCHD1A6NHR9 2005 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 DDTLA6NHG4 134 aaPredicted RBP14.21□□□□□ -0.13
RTN4-211ENST00000438462 FAM196BA6NMK8 535 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 FRAT2O75474 233 aaPredicted RBP14.21□□□□□ -0.13
RTN4-211ENST00000438462 DSG3P32926 999 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 RGS3P49796 1198 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 CCNA1P78396 465 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 CWF19L2Q2TBE0 894 aaKnown RBP14.21□□□□□ -0.13
RTN4-211ENST00000438462 NEK9Q8TD19 979 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 NKD2Q969F2 451 aaPredicted RBP14.21□□□□□ -0.13
RTN4-211ENST00000438462 USP40Q9NVE5 1235 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 TMOD4Q9NZQ9 345 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 LMCD1Q9NZU5 365 aa14.21□□□□□ -0.13
RTN4-211ENST00000438462 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms