RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 UBN2Q6ZU65 1347 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 NBPF7P0C2Y1 421 aaPredicted RBP8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 GPTP24298 496 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 LAMC2Q13753 1193 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 PARP10Q53GL7 1025 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 TRAPPC3LQ5T215 181 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 MSL1Q68DK7 614 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 CEP85Q6P2H3 762 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 CLEC4GQ6UXB4 293 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 CENPQQ7L2Z9 268 aaPredicted RBP8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 UBE3BQ7Z3V4 1068 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 BTBD6Q96KE9 485 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 SUSD3Q96L08 255 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 CEP63Q96MT8 703 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 CARMIL3Q8ND23 1372 aa8.56□□□□□ -1.04
GTF2A1-202ENST00000434192 KDM2BQ8NHM5 1336 aa8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 C10orf71Q711Q0 1435 aa8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 HMMRO75330 724 aa8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 HDAC1Q13547 482 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 ZNF468Q5VIY5 522 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 NLRP10Q86W26 655 aa8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 FCHSD1Q86WN1 690 aa8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 RPAP2Q8IXW5 612 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 ANKRD44Q8N8A2 993 aa8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 RWDD1Q9H446 243 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 ANKIB1Q9P2G1 1089 aa8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 MKL2Q9ULH7 1088 aa8.55□□□□□ -1.04
GTF2A1-202ENST00000434192 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.049e-7■□□□□ 8.5
GTF2A1-202ENST00000434192 CDHR2Q9BYE9 1310 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 PCCAP05165 728 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 PPP1R42Q7Z4L9 355 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 SYT9Q86SS6 491 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 ZNF34Q8IZ26 560 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 STAG2Q8N3U4 1231 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 ZBTB38Q8NAP3 1195 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 SUCLG2Q96I99 432 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 SLC30A3Q99726 388 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 BRD7Q9NPI1 651 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 AVENQ9NQS1 362 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 ARAP2Q8WZ64 1704 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
GTF2A1-202ENST00000434192 HSP90B1P14625 803 aaKnown RBP8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 CASP7P55210 303 aa8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 MTX1Q13505 466 aa8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 CHSY3Q70JA7 882 aa8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 SMIM5Q71RC9 77 aa8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 RAB44Q7Z6P3 723 aaPredicted RBP8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 FAM200AQ8TCP9 573 aa8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 NYXQ9GZU5 481 aa8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 ZMYND15Q9H091 742 aa8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 BICC1Q9H694 974 aaKnown RBP8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 TRMT112Q9UI30 125 aaKnown RBP8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 SH3TC1Q8TE82 1336 aa8.53□□□□□ -1.04
GTF2A1-202ENST00000434192 AK9Q5TCS8 1911 aa8.52□□□□□ -1.04
GTF2A1-202ENST00000434192 ABCC12Q96J65 1359 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 SRGAP3O43295 1099 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 NTSR2O95665 410 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 GYS1P13807 737 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 HOXB4P17483 251 aaPredicted RBP8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 IGFBP4P22692 258 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 RABL6Q3YEC7 729 aaPredicted RBP8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 TBC1D9BQ66K14 1250 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 NLGN2Q8NFZ4 835 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 GCC1Q96CN9 775 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 SETDB2Q96T68 719 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 UTP14AQ9BVJ6 771 aaKnown RBP8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 CD2APQ9Y5K6 639 aa8.52□□□□□ -1.05
GTF2A1-202ENST00000434192 LRRC37AA6NMS7 1700 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 TAF1P21675 1872 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 PNMA6EA0A0J9YXQ4 647 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 FAM177BA6PVY3 158 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 IRS4O14654 1257 aaPredicted RBP8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 NPHP1O15259 732 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 IGHDP01880 384 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 TYRO3Q06418 890 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 SUSD4Q5VX71 490 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 LINC00114Q6XXX2 140 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 SIRT2Q8IXJ6 389 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 FAM89AQ96GI7 184 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 KAZALD1Q96I82 304 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 PLA2G12BQ9BX93 195 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 NOVA2Q9UNW9 492 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 SLX4Q8IY92 1834 aa8.51□□□□□ -1.05
GTF2A1-202ENST00000434192 MYH13Q9UKX3 1938 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 PDE8AO60658 829 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 MMP10P09238 476 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 YY1P25490 414 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 CTSWP56202 376 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 ATP8B2P98198 1209 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 NFIXQ14938 502 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 BTLAQ7Z6A9 289 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 NBPF5PQ86XG9 351 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 SMC5Q8IY18 1101 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 NLGN1Q8N2Q7 840 aa8.5□□□□□ -1.05
GTF2A1-202ENST00000434192 CNBD1Q8NA66 436 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms