RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 NCAPHQ15003 741 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 LRRFIP1Q32MZ4 808 aaKnown RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 ARHGAP29Q52LW3 1261 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 GPR161Q8N6U8 529 aaKnown RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 PI4KAP1Q8N8J0 262 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 IP6K1Q92551 441 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 EAF2Q96CJ1 260 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 NAP1L4Q99733 375 aaKnown RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 EFCC1Q9HA90 598 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 CAPN10Q9HC96 672 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 ZMIZ1Q9ULJ6 1067 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 JAK2O60674 1132 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 DNAJC6O75061 913 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 RPS6KA5O75582 802 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 YEATS4O95619 227 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 TBC1D8O95759 1140 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 POU5F1Q01860 360 aaKnown RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 SCRN1Q12765 414 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 UBE4AQ14139 1066 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 JAKMIP3Q5VZ66 844 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 AACSQ86V21 672 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 METTL16Q86W50 562 aaKnown RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 ELOA2Q8IYF1 753 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 AOPEPQ8N6M6 819 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 STK32AQ8WU08 396 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 MRPS27Q92552 414 aaKnown RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 EXOC4Q96A65 974 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 ST7Q9NRC1 585 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 DBF4Q9UBU7 674 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-202ENST00000432306 NUB1Q9Y5A7 615 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 PARP3Q9Y6F1 533 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 NDUFB9Q9Y6M9 179 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 C4BP0C0L5 1744 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 MYH15Q9Y2K3 1946 aa9.21□□□□□ -0.93
VTI1A-202ENST00000432306 KIF13BQ9NQT8 1826 aa9.21□□□□□ -0.93
VTI1A-202ENST00000432306 FAM237AA0A1B0GTK4 181 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 TTC36A6NLP5 189 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 H3BQV1 296 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 ATP5JP18859 108 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 HOXC9P31274 260 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 TUBB4BP68371 445 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 GPS2Q13227 327 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 GNL2Q13823 731 aaKnown RBP9.21□□□□□ -0.94
VTI1A-202ENST00000432306 KSR2Q6VAB6 950 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 SYT10Q6XYQ8 523 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 RSRC2Q7L4I2 434 aaKnown RBP9.21□□□□□ -0.94
VTI1A-202ENST00000432306 ZNF589Q86UQ0 364 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-202ENST00000432306 LINS1Q8NG48 757 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 HNRNPLLQ8WVV9 542 aaKnown RBP9.21□□□□□ -0.94
VTI1A-202ENST00000432306 JDP2Q8WYK2 163 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 LTV1Q96GA3 475 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-202ENST00000432306 ZNF274Q96GC6 653 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-202ENST00000432306 C8orf48Q96LL4 319 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 CCSER2Q9H7U1 834 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 TRMT1Q9NXH9 659 aaKnown RBP9.21□□□□□ -0.94
VTI1A-202ENST00000432306 MRPL42Q9Y6G3 142 aaKnown RBP9.21□□□□□ -0.94
VTI1A-202ENST00000432306 TAF6LQ9Y6J9 622 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 SCINQ9Y6U3 715 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 ITGB4P16144 1822 aa9.21□□□□□ -0.94
VTI1A-202ENST00000432306 SH3TC1Q8TE82 1336 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 MAP2K7O14733 419 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 CTDNEP1O95476 244 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 AMPHP49418 695 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 PRELPP51888 382 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 NLRP12P59046 1061 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 EXOSC10Q01780 885 aaKnown RBP9.2□□□□□ -0.94
VTI1A-202ENST00000432306 CCDC96Q2M329 555 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 CCSAPQ6IQ19 270 aaPredicted RBP9.2□□□□□ -0.94
VTI1A-202ENST00000432306 CC2D1AQ6P1N0 951 aaPredicted RBP9.2□□□□□ -0.94
VTI1A-202ENST00000432306 CTR9Q6PD62 1173 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 REXO1L1PQ8IX06 675 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 LINC00301Q8NCQ3 95 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 KCNG4Q8TDN1 519 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 KLRG1Q96E93 195 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 KAZALD1Q96I82 304 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 KCNK17Q96T54 332 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 XPO4Q9C0E2 1151 aaKnown RBP9.2□□□□□ -0.94
VTI1A-202ENST00000432306 YY1AP1Q9H869 796 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 ATG3Q9NT62 314 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.2□□□□□ -0.94
VTI1A-202ENST00000432306 TUBE1Q9UJT0 475 aa9.2□□□□□ -0.94
VTI1A-202ENST00000432306 TPX2Q9ULW0 747 aaKnown RBP9.2□□□□□ -0.94
VTI1A-202ENST00000432306 FANCGO15287 622 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 ARHGAP6O43182 974 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 CBFA2T2O43439 604 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 MAN1A1P33908 653 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 PROX2Q3B8N5 592 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 COL13A1Q5TAT6 717 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-202ENST00000432306 LHX8Q68G74 356 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 Q6ZUG5 572 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 DHX32Q7L7V1 743 aaKnown RBP9.19□□□□□ -0.94
VTI1A-202ENST00000432306 TNS4Q8IZW8 715 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 JMYQ8N9B5 988 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 FSIP1Q8NA03 581 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 NFATC2IPQ8NCF5 419 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 LRRN4CLQ8ND94 238 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms