RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TRIM75PA6NK02 468 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 CCP110O43303 1012 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 CASP14P31944 242 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 NUTM2AQ8IVF1 878 aaPredicted RBP16.37■□□□□ 0.21
ERCC3-202ENST00000426778 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 CTNND2Q9UQB3 1225 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 NR1I3Q14994 352 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 ACRBPQ8NEB7 543 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 KIFC2Q96AC6 838 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 PAGE5Q96GU1 130 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 NIP7Q9Y221 180 aaKnown RBP eCLIP16.37■□□□□ 0.21
ERCC3-202ENST00000426778 STX10O60499 249 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 PLCD1P51178 756 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 NEK11Q8NG66 645 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 VPS16Q9H269 839 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 ZNF335Q9H4Z2 1342 aaPredicted RBP16.36■□□□□ 0.21
ERCC3-202ENST00000426778 SYNRGQ9UMZ2 1314 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 MYH6P13533 1939 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 RNF225M0QZC1 329 aaPredicted RBP16.36■□□□□ 0.21
ERCC3-202ENST00000426778 ZRANB2O95218 330 aaKnown RBP eCLIP16.36■□□□□ 0.21
ERCC3-202ENST00000426778 ST5P78524 1137 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 PLIN2Q99541 437 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 PARD6BQ9BYG5 372 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 ARGLU1Q9NWB6 273 aaPredicted RBP16.36■□□□□ 0.21
ERCC3-202ENST00000426778 MRFAP1Q9Y605 127 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 TAF1P21675 1872 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 COL4A1P02462 1669 aa16.36■□□□□ 0.21
ERCC3-202ENST00000426778 MAGEB6P1A0A0J9YX57 407 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 EFCAB8A8MWE9 144 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 AKR1B15C9JRZ8 316 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-202ENST00000426778 MCM7P33993 719 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 IGHMBP2P38935 993 aaKnown RBP16.35■□□□□ 0.21
ERCC3-202ENST00000426778 MAP3K9P80192 1104 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 IFIT1BQ5T764 474 aaKnown RBP16.35■□□□□ 0.21
ERCC3-202ENST00000426778 CDC5LQ99459 802 aaKnown RBP16.35■□□□□ 0.21
ERCC3-202ENST00000426778 KLRK1P26718 216 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 FXR1P51114 621 aaKnown RBP eCLIP16.35■□□□□ 0.21
ERCC3-202ENST00000426778 APTXQ7Z2E3 356 aaKnown RBP16.35■□□□□ 0.21
ERCC3-202ENST00000426778 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 MYH8P13535 1937 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 TBC1D8O95759 1140 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 PTGDRQ13258 359 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 SEC23AQ15436 765 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 NT5DC1Q5TFE4 455 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 PIK3AP1Q6ZUJ8 805 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 PPFIBP1Q86W92 1011 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 SUGCTQ9HAC7 445 aa16.35■□□□□ 0.21
ERCC3-202ENST00000426778 PES1O00541 588 aaKnown RBP16.34■□□□□ 0.21
ERCC3-202ENST00000426778 KRT2P35908 639 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 ATP6V1AP38606 617 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 ZNF569Q5MCW4 686 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 WWC2Q6AWC2 1192 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 RASGRP4Q8TDF6 673 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 ESR2Q92731 530 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
ERCC3-202ENST00000426778 DCCP43146 1447 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 ITGB4P16144 1822 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 A0A1B0GTH6 734 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 CYP2D6P10635 497 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 SLC51AQ86UW1 340 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 ZSCAN10Q96SZ4 725 aaPredicted RBP16.34■□□□□ 0.21
ERCC3-202ENST00000426778 DACH1Q9UI36 760 aa16.34■□□□□ 0.21
ERCC3-202ENST00000426778 USP17L12C9JPN9 530 aa16.33■□□□□ 0.21
ERCC3-202ENST00000426778 USP17L21D6R901 530 aa16.33■□□□□ 0.21
ERCC3-202ENST00000426778 CUL4BQ13620 913 aa16.33■□□□□ 0.21
ERCC3-202ENST00000426778 CC2D1AQ6P1N0 951 aaPredicted RBP16.33■□□□□ 0.21
ERCC3-202ENST00000426778 TAB2Q9NYJ8 693 aa16.33■□□□□ 0.21
ERCC3-202ENST00000426778 CCDC175P0C221 793 aa16.33■□□□□ 0.2
ERCC3-202ENST00000426778 OAS2P29728 719 aaKnown RBP16.33■□□□□ 0.2
ERCC3-202ENST00000426778 CRKLP46109 303 aaKnown RBP16.33■□□□□ 0.2
ERCC3-202ENST00000426778 ZNF384Q8TF68 577 aa16.33■□□□□ 0.2
ERCC3-202ENST00000426778 LRP6O75581 1613 aa16.33■□□□□ 0.2
ERCC3-202ENST00000426778 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-202ENST00000426778 EXOC5O00471 708 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-202ENST00000426778 RRAGBQ5VZM2 374 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 GPIHBP1Q8IV16 184 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 ZFP91Q96JP5 570 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-202ENST00000426778 CEP131Q9UPN4 1083 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 ADGRG1Q9Y653 693 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 BCL9O00512 1426 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 PPP1R3GB7ZBB8 358 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 GYPCP04921 128 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 RHOXF2BP0C7M4 288 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 CCDC152Q4G0S7 254 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 RHOXF2Q9BQY4 288 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 PHF20Q9BVI0 1012 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 RNF41Q9H4P4 317 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-202ENST00000426778 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
ERCC3-202ENST00000426778 TTC38Q5R3I4 469 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 SPATA1Q5VX52 437 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
ERCC3-202ENST00000426778 CATIPQ7Z7H3 387 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 SRBD1Q8N5C6 995 aaKnown RBP16.32■□□□□ 0.2
ERCC3-202ENST00000426778 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.2
ERCC3-202ENST00000426778 TRIM10Q9UDY6 481 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 ADD3Q9UEY8 706 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms