RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 RAD50Q92878 1312 aa27.96■■■□□ 2.07
PDGFA-205ENST00000426681 GPR25O00155 361 aa27.96■■■□□ 2.07
PDGFA-205ENST00000426681 AGTPBP1Q9UPW5 1226 aa27.96■■■□□ 2.07
PDGFA-205ENST00000426681 CASP8AP2Q9UKL3 1982 aa27.95■■■□□ 2.07
PDGFA-205ENST00000426681 PDE4BQ07343 736 aa27.95■■■□□ 2.06
PDGFA-205ENST00000426681 KIAA1683Q9H0B3 1180 aa27.95■■■□□ 2.06
PDGFA-205ENST00000426681 STK11IPQ8N1F8 1099 aa27.94■■■□□ 2.06
PDGFA-205ENST00000426681 DSCC1Q9BVC3 393 aa27.94■■■□□ 2.06
PDGFA-205ENST00000426681 IL25Q9H293 177 aa27.94■■■□□ 2.06
PDGFA-205ENST00000426681 TMOD4Q9NZQ9 345 aa27.94■■■□□ 2.06
PDGFA-205ENST00000426681 USP17L2Q6R6M4 530 aa27.93■■■□□ 2.06
PDGFA-205ENST00000426681 ACER1Q8TDN7 264 aa27.93■■■□□ 2.06
PDGFA-205ENST00000426681 KANSL2Q9H9L4 492 aa27.93■■■□□ 2.06
PDGFA-205ENST00000426681 GREB1LQ9C091 1923 aaPredicted RBP27.92■■■□□ 2.06
PDGFA-205ENST00000426681 TLR2O60603 784 aa27.92■■■□□ 2.06
PDGFA-205ENST00000426681 USP14P54578 494 aa27.92■■■□□ 2.06
PDGFA-205ENST00000426681 TREML2Q5T2D2 321 aa27.92■■■□□ 2.06
PDGFA-205ENST00000426681 COL13A1Q5TAT6 717 aaPredicted RBP27.92■■■□□ 2.06
PDGFA-205ENST00000426681 SIAH1Q8IUQ4 282 aa27.92■■■□□ 2.06
PDGFA-205ENST00000426681 ZNF444Q8N0Y2 327 aaPredicted RBP27.92■■■□□ 2.06
PDGFA-205ENST00000426681 ZNF296Q8WUU4 475 aaPredicted RBP27.92■■■□□ 2.06
PDGFA-205ENST00000426681 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.92■■■□□ 2.06
PDGFA-205ENST00000426681 EMILIN3Q9NT22 766 aa27.92■■■□□ 2.06
PDGFA-205ENST00000426681 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.92■■■□□ 2.06
PDGFA-205ENST00000426681 FGRP09769 529 aa27.91■■■□□ 2.06
PDGFA-205ENST00000426681 CTDSPL2Q05D32 466 aa27.91■■■□□ 2.06
PDGFA-205ENST00000426681 DGKZQ13574 1117 aa27.91■■■□□ 2.06
PDGFA-205ENST00000426681 C12orf42Q96LP6 360 aa27.91■■■□□ 2.06
PDGFA-205ENST00000426681 PARK7Q99497 189 aaKnown RBP27.91■■■□□ 2.06
PDGFA-205ENST00000426681 FEZ1Q99689 392 aa27.91■■■□□ 2.06
PDGFA-205ENST00000426681 FKTNO75072 461 aa27.9■■■□□ 2.06
PDGFA-205ENST00000426681 PRDM1O75626 825 aa27.9■■■□□ 2.06
PDGFA-205ENST00000426681 ICA1Q05084 483 aa27.9■■■□□ 2.06
PDGFA-205ENST00000426681 PABPC4Q13310 644 aaKnown RBP eCLIP27.9■■■□□ 2.06
PDGFA-205ENST00000426681 ADGRA2Q96PE1 1338 aa27.9■■■□□ 2.06
PDGFA-205ENST00000426681 A0A1W2PRG0 241 aa27.89■■■□□ 2.06
PDGFA-205ENST00000426681 SGSM2O43147 1006 aa27.89■■■□□ 2.06
PDGFA-205ENST00000426681 HOXA7P31268 230 aaPredicted RBP27.89■■■□□ 2.06
PDGFA-205ENST00000426681 ORC4O43929 436 aa27.88■■■□□ 2.05
PDGFA-205ENST00000426681 CYP2C8P10632 490 aa27.88■■■□□ 2.05
PDGFA-205ENST00000426681 ARHGEF10LQ9HCE6 1279 aa27.88■■■□□ 2.05
PDGFA-205ENST00000426681 CTNNA3Q9UI47 895 aa27.88■■■□□ 2.05
PDGFA-205ENST00000426681 PNMA3Q9UL41 463 aa27.88■■■□□ 2.05
PDGFA-205ENST00000426681 TMX2Q9Y320 296 aa27.88■■■□□ 2.05
PDGFA-205ENST00000426681 PLIN4Q96Q06 1357 aa27.87■■■□□ 2.05
PDGFA-205ENST00000426681 IGKV6D-41A0A0C4DH26 115 aa27.87■■■□□ 2.05
PDGFA-205ENST00000426681 PCP11498 1178 aaKnown RBP27.87■■■□□ 2.05
PDGFA-205ENST00000426681 C17orf99Q6UX52 265 aa27.87■■■□□ 2.05
PDGFA-205ENST00000426681 CLEC10AQ8IUN9 316 aa27.87■■■□□ 2.05
PDGFA-205ENST00000426681 NEDD1Q8NHV4 660 aa27.87■■■□□ 2.05
PDGFA-205ENST00000426681 SH2D4AQ9H788 454 aa27.87■■■□□ 2.05
PDGFA-205ENST00000426681 TACC3Q9Y6A5 838 aa27.87■■■□□ 2.05
PDGFA-205ENST00000426681 EEF2P13639 858 aaKnown RBP27.86■■■□□ 2.05
PDGFA-205ENST00000426681 OSBPP22059 807 aa27.86■■■□□ 2.05
PDGFA-205ENST00000426681 SP3Q02447 781 aa27.86■■■□□ 2.05
PDGFA-205ENST00000426681 NBPF3Q9H094 633 aa27.86■■■□□ 2.05
PDGFA-205ENST00000426681 INCENPQ9NQS7 918 aa27.86■■■□□ 2.05
PDGFA-205ENST00000426681 LAMA4Q16363 1823 aa27.85■■■□□ 2.05
PDGFA-205ENST00000426681 ZNF213O14771 459 aa27.85■■■□□ 2.05
PDGFA-205ENST00000426681 HAND2P61296 217 aa27.85■■■□□ 2.05
PDGFA-205ENST00000426681 TFAP4Q01664 338 aa27.85■■■□□ 2.05
PDGFA-205ENST00000426681 ZYXQ15942 572 aaKnown RBP27.85■■■□□ 2.05
PDGFA-205ENST00000426681 ASCC2Q9H1I8 757 aaPredicted RBP27.85■■■□□ 2.05
PDGFA-205ENST00000426681 NYAP2Q9P242 653 aa27.85■■■□□ 2.05
PDGFA-205ENST00000426681 TSPY3P0CV98 308 aa27.84■■■□□ 2.05
PDGFA-205ENST00000426681 TSPY8P0CW00 308 aa27.84■■■□□ 2.05
PDGFA-205ENST00000426681 AKNAD1Q5T1N1 836 aa27.84■■■□□ 2.05
PDGFA-205ENST00000426681 STAG1Q8WVM7 1258 aa27.84■■■□□ 2.05
PDGFA-205ENST00000426681 CPA4Q9UI42 421 aa27.84■■■□□ 2.05
PDGFA-205ENST00000426681 BCRP11274 1271 aa27.83■■■□□ 2.05
PDGFA-205ENST00000426681 VCAM1P19320 739 aa27.83■■■□□ 2.05
PDGFA-205ENST00000426681 FAM47AQ5JRC9 791 aa27.83■■■□□ 2.05
PDGFA-205ENST00000426681 TBC1D10CQ8IV04 446 aa27.83■■■□□ 2.05
PDGFA-205ENST00000426681 SMCR8Q8TEV9 937 aaPredicted RBP27.83■■■□□ 2.05
PDGFA-205ENST00000426681 LPAR1Q92633 364 aa27.83■■■□□ 2.05
PDGFA-205ENST00000426681 ERO1AQ96HE7 468 aa27.83■■■□□ 2.05
PDGFA-205ENST00000426681 RNF41Q9H4P4 317 aaPredicted RBP27.83■■■□□ 2.05
PDGFA-205ENST00000426681 MTMR4Q9NYA4 1195 aa27.83■■■□□ 2.05
PDGFA-205ENST00000426681 USP17L15C9J2P7 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 USP17L13C9JLJ4 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 USP17L11C9JVI0 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 USP17L18D6R9N7 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 USP17L22D6RA61 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 USP17L17D6RBQ6 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 USP17L19D6RCP7 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 USP17L20D6RJB6 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 PTH1RQ03431 593 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 USP17L24Q0WX57 530 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 IMMTQ16891 758 aaKnown RBP27.82■■■□□ 2.04
PDGFA-205ENST00000426681 MFSD6Q6ZSS7 791 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 CEP95Q96GE4 821 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 ESYT1Q9BSJ8 1104 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 VCPKMTQ9H867 229 aa27.82■■■□□ 2.04
PDGFA-205ENST00000426681 RANBP6O60518 1105 aaKnown RBP27.81■■■□□ 2.04
PDGFA-205ENST00000426681 GCLCP48506 637 aaPredicted RBP27.81■■■□□ 2.04
PDGFA-205ENST00000426681 NT5C2P49902 561 aa27.81■■■□□ 2.04
PDGFA-205ENST00000426681 IRX3P78415 501 aaPredicted RBP27.81■■■□□ 2.04
PDGFA-205ENST00000426681 ATP2B2Q01814 1243 aa27.81■■■□□ 2.04
PDGFA-205ENST00000426681 MKL1Q969V6 931 aa27.81■■■□□ 2.04
PDGFA-205ENST00000426681 SYNPO2Q9UMS6 1093 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms