RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TBC1D12O60347 775 aa15.41■□□□□ 0.06
SGCE-203ENST00000425444 MAP3K10Q02779 954 aa15.41■□□□□ 0.06
SGCE-203ENST00000425444 SHHQ15465 462 aa15.41■□□□□ 0.06
SGCE-203ENST00000425444 LHX8Q68G74 356 aa15.41■□□□□ 0.06
SGCE-203ENST00000425444 CERS3Q8IU89 383 aa15.41■□□□□ 0.06
SGCE-203ENST00000425444 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.41■□□□□ 0.06
SGCE-203ENST00000425444 SENP6Q9GZR1 1112 aaPredicted RBP15.41■□□□□ 0.06
SGCE-203ENST00000425444 DHX36Q9H2U1 1008 aaKnown RBP15.41■□□□□ 0.06
SGCE-203ENST00000425444 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
SGCE-203ENST00000425444 MYO5AQ9Y4I1 1855 aaKnown RBP15.41■□□□□ 0.06
SGCE-203ENST00000425444 DOCK1Q14185 1865 aa15.4■□□□□ 0.06
SGCE-203ENST00000425444 SMARCA5O60264 1052 aaPredicted RBP15.4■□□□□ 0.06
SGCE-203ENST00000425444 USP5P45974 858 aa15.4■□□□□ 0.06
SGCE-203ENST00000425444 CACNB2Q08289 660 aaPredicted RBP15.4■□□□□ 0.06
SGCE-203ENST00000425444 CRACR2BQ8N4Y2 399 aaPredicted RBP15.4■□□□□ 0.06
SGCE-203ENST00000425444 BOLA2Q9H3K6 86 aa15.4■□□□□ 0.06
SGCE-203ENST00000425444 PI4KBQ9UBF8 816 aa15.4■□□□□ 0.06
SGCE-203ENST00000425444 SAP30BPQ9UHR5 308 aaKnown RBP15.4■□□□□ 0.06
SGCE-203ENST00000425444 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
SGCE-203ENST00000425444 PLXNB2O15031 1838 aa15.39■□□□□ 0.05
SGCE-203ENST00000425444 HLA-DOAP06340 250 aa15.39■□□□□ 0.05
SGCE-203ENST00000425444 ZKSCAN1P17029 563 aaPredicted RBP15.39■□□□□ 0.05
SGCE-203ENST00000425444 CCND3P30281 292 aaPredicted RBP15.39■□□□□ 0.05
SGCE-203ENST00000425444 ATN1P54259 1190 aaPredicted RBP15.39■□□□□ 0.05
SGCE-203ENST00000425444 SMAD3P84022 425 aaKnown RBP15.39■□□□□ 0.05
SGCE-203ENST00000425444 PABPC4Q13310 644 aaKnown RBP eCLIP15.39■□□□□ 0.05
SGCE-203ENST00000425444 C9orf50Q5SZB4 431 aa15.39■□□□□ 0.05
SGCE-203ENST00000425444 SLC9C2Q5TAH2 1124 aa15.39■□□□□ 0.05
SGCE-203ENST00000425444 TMED8Q6PL24 325 aaPredicted RBP15.39■□□□□ 0.05
SGCE-203ENST00000425444 PROCA1Q8NCQ7 364 aaPredicted RBP15.39■□□□□ 0.05
SGCE-203ENST00000425444 NUDT12Q9BQG2 462 aa15.39■□□□□ 0.05
SGCE-203ENST00000425444 HERC5Q9UII4 1024 aaKnown RBP15.39■□□□□ 0.05
SGCE-203ENST00000425444 XRCC5P13010 732 aaKnown RBP15.38■□□□□ 0.05
SGCE-203ENST00000425444 TRMT44Q8IYL2 757 aaKnown RBP15.38■□□□□ 0.05
SGCE-203ENST00000425444 USP38Q8NB14 1042 aa15.38■□□□□ 0.05
SGCE-203ENST00000425444 EDC3Q96F86 508 aaKnown RBP15.38■□□□□ 0.05
SGCE-203ENST00000425444 ASCC2Q9H1I8 757 aaPredicted RBP15.38■□□□□ 0.05
SGCE-203ENST00000425444 PAG1Q9NWQ8 432 aa15.38■□□□□ 0.05
SGCE-203ENST00000425444 PALD1Q9ULE6 856 aa15.38■□□□□ 0.05
SGCE-203ENST00000425444 MAGEB6P1A0A0J9YX57 407 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 PDE6AP16499 860 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 ATP5JP18859 108 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
SGCE-203ENST00000425444 HMGCS2P54868 508 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 SPP2Q13103 211 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 SOCS4Q8WXH5 440 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 GPATCH3Q96I76 525 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 FOCADQ5VW36 1801 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 ZNF532Q9HCE3 1301 aa15.37■□□□□ 0.05
SGCE-203ENST00000425444 XIRP2A4UGR9 3374 aa15.36■□□□□ 0.05
SGCE-203ENST00000425444 CDK5RAP2Q96SN8 1893 aa15.36■□□□□ 0.05
SGCE-203ENST00000425444 CAP2P40123 477 aa15.36■□□□□ 0.05
SGCE-203ENST00000425444 RTP1P59025 263 aa15.36■□□□□ 0.05
SGCE-203ENST00000425444 CRBNQ96SW2 442 aa15.36■□□□□ 0.05
SGCE-203ENST00000425444 HAUS7Q99871 368 aa15.36■□□□□ 0.05
SGCE-203ENST00000425444 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.36■□□□□ 0.05
SGCE-203ENST00000425444 CHD9Q3L8U1 2897 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 CCL14Q16627 93 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 FOXP4Q8IVH2 680 aaPredicted RBP15.35■□□□□ 0.05
SGCE-203ENST00000425444 ZNF280CQ8ND82 737 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 RIOK1Q9BRS2 568 aaKnown RBP15.35■□□□□ 0.05
SGCE-203ENST00000425444 TBC1D2Q9BYX2 928 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 CRNKL1Q9BZJ0 848 aaKnown RBP15.35■□□□□ 0.05
SGCE-203ENST00000425444 DCTPP1Q9H773 170 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 AS3MTQ9HBK9 375 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 PRDM5Q9NQX1 630 aaPredicted RBP15.35■□□□□ 0.05
SGCE-203ENST00000425444 ECHDC1Q9NTX5 307 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 MORF4L1Q9UBU8 362 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 ATP11BQ9Y2G3 1177 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 PCDHB15Q9Y5E8 787 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 SIPA1L1O43166 1804 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 LTBP2Q14767 1821 aa15.35■□□□□ 0.05
SGCE-203ENST00000425444 USP17L5A8MUK1 530 aa15.34■□□□□ 0.05
SGCE-203ENST00000425444 PEX10O60683 326 aa15.34■□□□□ 0.05
SGCE-203ENST00000425444 GDF11O95390 407 aa15.34■□□□□ 0.05
SGCE-203ENST00000425444 IRX3P78415 501 aaPredicted RBP15.34■□□□□ 0.05
SGCE-203ENST00000425444 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
SGCE-203ENST00000425444 BADQ92934 168 aa15.34■□□□□ 0.05
SGCE-203ENST00000425444 DNAJC18Q9H819 358 aa15.34■□□□□ 0.05
SGCE-203ENST00000425444 ATAD5Q96QE3 1844 aa15.33■□□□□ 0.05
SGCE-203ENST00000425444 MUC6Q6W4X9 2439 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 POLR3DP05423 398 aaPredicted RBP15.33■□□□□ 0.04
SGCE-203ENST00000425444 ASNSP08243 561 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 ADD2P35612 726 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 RGS2P41220 211 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 RRP1BQ14684 758 aaKnown RBP15.33■□□□□ 0.04
SGCE-203ENST00000425444 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 TTC6Q86TZ1 520 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 LCORLQ8N3X6 602 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 GPRC5AQ8NFJ5 357 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
SGCE-203ENST00000425444 LOC285556D6RIA3 1793 aa15.33■□□□□ 0.04
SGCE-203ENST00000425444 NAV1Q8NEY1 1877 aa15.32■□□□□ 0.04
SGCE-203ENST00000425444 TCRBV5S4A2TA0A5A2 114 aa15.32■□□□□ 0.04
SGCE-203ENST00000425444 MAPK4P31152 587 aa15.32■□□□□ 0.04
SGCE-203ENST00000425444 GRIN2CQ14957 1233 aa15.32■□□□□ 0.04
SGCE-203ENST00000425444 TSHZ3Q63HK5 1081 aa15.32■□□□□ 0.04
SGCE-203ENST00000425444 METTL16Q86W50 562 aaKnown RBP15.32■□□□□ 0.04
SGCE-203ENST00000425444 PPM1EQ8WY54 764 aa15.32■□□□□ 0.04
SGCE-203ENST00000425444 USP6NLQ92738 828 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms