RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ASCC2Q9H1I8 757 aaPredicted RBP13.42□□□□□ -0.26
RFFL-204ENST00000414419 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 GSG1L2A8MUP6 293 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 M0R2C6 588 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 TDO2P48775 406 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 IRX6P78412 446 aaPredicted RBP13.41□□□□□ -0.26
RFFL-204ENST00000414419 MLLT1Q03111 559 aaPredicted RBP13.41□□□□□ -0.26
RFFL-204ENST00000414419 SEPT2Q15019 361 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 FAM110CQ1W6H9 321 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 C16orf86Q6ZW13 317 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 CHD1LQ86WJ1 897 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 RAET1EQ8TD07 263 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 TRIM47Q96LD4 638 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 EMILIN3Q9NT22 766 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 SRRDQ9UH36 339 aa13.41□□□□□ -0.26
RFFL-204ENST00000414419 MYPNQ86TC9 1320 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 KIAA0100Q14667 2235 aaKnown RBP13.4□□□□□ -0.26
RFFL-204ENST00000414419 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
RFFL-204ENST00000414419 TNPO2O14787 897 aaKnown RBP13.4□□□□□ -0.26
RFFL-204ENST00000414419 CTGFP29279 349 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 GUCY1A2P33402 732 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 RGS19P49795 217 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 NUCB1Q02818 461 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 SBK1Q52WX2 424 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 ZMYM1Q5SVZ6 1142 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 COA7Q96BR5 231 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 KIAA1683Q9H0B3 1180 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 MKNK2Q9HBH9 465 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 ZNF287Q9HBT7 754 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 ARHGEF10LQ9HCE6 1279 aa13.4□□□□□ -0.26
RFFL-204ENST00000414419 USP17L15C9J2P7 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 USP17L13C9JLJ4 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 USP17L11C9JVI0 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 USP17L18D6R9N7 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 USP17L22D6RA61 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 USP17L17D6RBQ6 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 USP17L19D6RCP7 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 USP17L20D6RJB6 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 AKR1B1P15121 316 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 HERVK_113P62684 666 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 USP17L24Q0WX57 530 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
RFFL-204ENST00000414419 IFNL3Q8IZI9 196 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 ACER1Q8TDN7 264 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
RFFL-204ENST00000414419 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 C12orf42Q96LP6 360 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 SEC62Q99442 399 aaKnown RBP13.39□□□□□ -0.27
RFFL-204ENST00000414419 P2RX7Q99572 595 aaKnown RBP13.39□□□□□ -0.27
RFFL-204ENST00000414419 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 NAPBQ9H115 298 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 SH2D4AQ9H788 454 aa13.39□□□□□ -0.27
RFFL-204ENST00000414419 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
RFFL-204ENST00000414419 ATP2B2Q01814 1243 aa13.38□□□□□ -0.27
RFFL-204ENST00000414419 ICA1Q05084 483 aa13.38□□□□□ -0.27
RFFL-204ENST00000414419 TICAM2Q86XR7 235 aa13.38□□□□□ -0.27
RFFL-204ENST00000414419 HELLSQ9NRZ9 838 aa13.38□□□□□ -0.27
RFFL-204ENST00000414419 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
RFFL-204ENST00000414419 SMIM22K7EJ46 135 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 VCAM1P19320 739 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 GRK4P32298 578 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 PRKCZQ05513 592 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 CATSPERGQ6ZRH7 1159 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 PLEKHM2Q8IWE5 1019 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
RFFL-204ENST00000414419 GPRC5AQ8NFJ5 357 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 SH3TC2Q8TF17 1288 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 PAGR1Q9BTK6 254 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 RPAP3Q9H6T3 665 aaPredicted RBP13.37□□□□□ -0.27
RFFL-204ENST00000414419 KANSL2Q9H9L4 492 aa13.37□□□□□ -0.27
RFFL-204ENST00000414419 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
RFFL-204ENST00000414419 A0A1W2PRG0 241 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 MYCP01106 439 aaPredicted RBP13.36□□□□□ -0.27
RFFL-204ENST00000414419 PDE4BQ07343 736 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 MCMDC2Q4G0Z9 681 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 LPAR1Q92633 364 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 ZNF333Q96JL9 665 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 OSBPL3Q9H4L5 887 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
RFFL-204ENST00000414419 MORF4L1Q9UBU8 362 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 GABRQQ9UN88 632 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
RFFL-204ENST00000414419 RAD21O60216 631 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 EEF2P13639 858 aaKnown RBP13.35□□□□□ -0.27
RFFL-204ENST00000414419 FLT3LGP49771 235 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 ERVK-24P63145 666 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 UBXN2AP68543 259 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 CCNA1P78396 465 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 CLEC10AQ8IUN9 316 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 SLAIN1Q8ND83 568 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 HOXC10Q9NYD6 342 aa13.35□□□□□ -0.27
RFFL-204ENST00000414419 RBPJLQ9UBG7 517 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms