RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 CNGA4Q8IV77 575 aa18.83■□□□□ 0.6
PCDHA13-202ENST00000409494 MMRN2Q9H8L6 949 aa18.83■□□□□ 0.6
PCDHA13-202ENST00000409494 TACC1O75410 805 aa18.83■□□□□ 0.6
PCDHA13-202ENST00000409494 RABGAP1Q9Y3P9 1069 aa18.83■□□□□ 0.6
PCDHA13-202ENST00000409494 ABCC12Q96J65 1359 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 SMCO2A6NFE2 343 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 H0YCG3 227 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 OTUD6AQ7L8S5 288 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 FOXP4Q8IVH2 680 aaPredicted RBP18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 NCOA5Q9HCD5 579 aaKnown RBP18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 STRN3Q13033 797 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 ZMYND15Q9H091 742 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 BIN2Q9UBW5 565 aaPredicted RBP18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 KRT86O43790 486 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 SLFN12Q8IYM2 578 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 CPXCR1Q8N123 301 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 TXKP42681 527 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 CCNA1P78396 465 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 FBXO11Q86XK2 927 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 SNX29Q8TEQ0 813 aa18.82■□□□□ 0.6
PCDHA13-202ENST00000409494 USP17L3A6NCW0 530 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 USP17L4A6NCW7 530 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 KLRF2D3W0D1 207 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 KIAA0754O94854 1291 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 CFBP00751 764 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 USP17L1Q7RTZ2 530 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 BLIDQ8IZY5 108 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 PIM2Q9P1W9 311 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 GSTTP1A0A1W2PQM5 241 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 SNX16P57768 344 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 SLFN13Q68D06 897 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 CCDC42Q96M95 316 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 FNBP1Q96RU3 617 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 TMEM63CQ9P1W3 806 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 LUC7L2Q9Y383 392 aaKnown RBP18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 NDUFB9Q9Y6M9 179 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 POLR3GO15318 223 aaPredicted RBP18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 PDE4DQ08499 809 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 KIF22Q14807 665 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 ZYXQ15942 572 aaKnown RBP18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 FAM47AQ5JRC9 791 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 EDC3Q96F86 508 aaKnown RBP18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 NOD1Q9Y239 953 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
PCDHA13-202ENST00000409494 SCG2P13521 617 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 TRAPPC10P48553 1259 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 PODNQ7Z5L7 613 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 ISCA1Q9BUE6 129 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 SEC31BQ9NQW1 1179 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 SERPINB13Q9UIV8 391 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 CEP170BQ9Y4F5 1589 aaPredicted RBP18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 GCOM1H8Y6P7 765 aaPredicted RBP18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 POLR2MP0CAP2 368 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 CIAPIN1Q6FI81 312 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 KRT222Q8N1A0 295 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 RFX7Q2KHR2 1363 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 MYZAPP0CAP1 466 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 WDR44Q5JSH3 913 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 RNF26Q9BY78 433 aaPredicted RBP18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 ANTXR1Q9H6X2 564 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 TRAF5O00463 557 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 CCDC175P0C221 793 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 MYCLP12524 364 aaPredicted RBP18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 HOXA7P31268 230 aaPredicted RBP18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 KIF5AQ12840 1032 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 CTNNBL1Q8WYA6 563 aaPredicted RBP18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 TMX1Q9H3N1 280 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 CLSTN2Q9H4D0 955 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 PSTPIP2Q9H939 334 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 CALCOCO1Q9P1Z2 691 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 ADCY9O60503 1353 aa18.8■□□□□ 0.6
PCDHA13-202ENST00000409494 ADORA1P30542 326 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 LEO1Q8WVC0 666 aaPredicted RBP18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 SRRTQ9BXP5 876 aaKnown RBP18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 GOLGA6L7A0A1B0GV03 622 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 PRAMEF22A3QJZ6 481 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 EAPPQ56P03 285 aaPredicted RBP18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 HACE1Q8IYU2 909 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 NUP58Q9BVL2 599 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 PI4KBQ9UBF8 816 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 STX10O60499 249 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 SCNN1DP51172 638 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 MYSM1Q5VVJ2 828 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 SDR42E1Q8WUS8 393 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 DNAI1Q9UI46 699 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 KIFAP3Q92845 792 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 AMNQ9BXJ7 453 aa18.79■□□□□ 0.6
PCDHA13-202ENST00000409494 BCORL1Q5H9F3 1711 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 A0A1B0GVL5 298 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 LAD1O00515 517 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 GADD45BO75293 160 aaPredicted RBP18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 TTLL1O95922 423 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 LSG1Q9H089 658 aaKnown RBP18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 ZBTB21Q9ULJ3 1066 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 TERF1P54274 439 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms