RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 TSGA10IPQ3SY00 556 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 TMEM67Q5HYA8 995 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 TATDN1Q6P1N9 297 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 SYNE3Q6ZMZ3 975 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 TMEM179Q6ZVK1 233 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 MOB2Q70IA6 237 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 DHX32Q7L7V1 743 aaKnown RBP10.5□□□□□ -0.73
BRCC3-206ENST00000399042 ANKRD13AQ8IZ07 590 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 ZKSCAN4Q969J2 545 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-206ENST00000399042 TBC1D32Q96NH3 1257 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 FEZ1Q99689 392 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 TMEM106CQ9BVX2 250 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 NBPF3Q9H094 633 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 ZSWIM5Q9P217 1185 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 STX8Q9UNK0 236 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 MTMR7Q9Y216 660 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 TAF6LQ9Y6J9 622 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 ROBO3Q96MS0 1386 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 CCDC69A6NI79 296 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 ITGBL1O95965 494 aaPredicted RBP10.49□□□□□ -0.73
BRCC3-206ENST00000399042 CPA1P15085 419 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 INPP5BP32019 993 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 RBM25P49756 843 aaKnown RBP10.49□□□□□ -0.73
BRCC3-206ENST00000399042 HUNKP57058 714 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 ICA1Q05084 483 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 WTAPQ15007 396 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 SEPT2Q15019 361 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 RABEP1Q15276 862 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 ADCK5Q3MIX3 580 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 IFIT1BQ5T764 474 aaKnown RBP10.49□□□□□ -0.73
BRCC3-206ENST00000399042 STOX1Q6ZVD7 989 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 RUFY3Q7L099 469 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
BRCC3-206ENST00000399042 SCYL3Q8IZE3 742 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 KLRG1Q96E93 195 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 ZSCAN10Q96SZ4 725 aaPredicted RBP10.49□□□□□ -0.73
BRCC3-206ENST00000399042 LRRC2Q9BYS8 371 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 SH2D4AQ9H788 454 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 DNAJC18Q9H819 358 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 KAT14Q9H8E8 782 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 KANSL2Q9H9L4 492 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 ELP3Q9H9T3 547 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 AS3MTQ9HBK9 375 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 ARHGEF10LQ9HCE6 1279 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 GINM1Q9NU53 330 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 CLIP2Q9UDT6 1046 aa10.49□□□□□ -0.73
BRCC3-206ENST00000399042 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
BRCC3-206ENST00000399042 TMEM88BA6NKF7 163 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 USP17L5A8MUK1 530 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 PHF20L1A8MW92 1017 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 RPS6KB1P23443 525 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 GRM1Q13255 1194 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 VGLL4Q14135 290 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 ANKRD1Q15327 319 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 Q6ZUG5 572 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 NOL8Q76FK4 1167 aaKnown RBP10.48□□□□□ -0.73
BRCC3-206ENST00000399042 NEDD1Q8NHV4 660 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 KCNB2Q92953 911 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 TMEM87BQ96K49 555 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 TCEANC2Q96MN5 208 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 TM6SF1Q9BZW5 370 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 ZSWIM6Q9HCJ5 1215 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 ZBTB21Q9ULJ3 1066 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 ZHX2Q9Y6X8 837 aa10.48□□□□□ -0.73
BRCC3-206ENST00000399042 NAV1Q8NEY1 1877 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 TRIM75PA6NK02 468 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 NMT2O60551 498 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 TTLL1O95922 423 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 FGRP09769 529 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 ZNF157P51786 506 aaPredicted RBP10.47□□□□□ -0.73
BRCC3-206ENST00000399042 MAP3K10Q02779 954 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 ZYXQ15942 572 aaKnown RBP10.47□□□□□ -0.73
BRCC3-206ENST00000399042 CYB5R4Q7L1T6 521 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 CATIPQ7Z7H3 387 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 MB21D2Q8IYB1 491 aaPredicted RBP10.47□□□□□ -0.73
BRCC3-206ENST00000399042 TMTC2Q8N394 836 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.47□□□□□ -0.73
BRCC3-206ENST00000399042 CHMP4CQ96CF2 233 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 CEP95Q96GE4 821 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 ZNF112Q9UJU3 913 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 TACC3Q9Y6A5 838 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 TNKSO95271 1327 aa10.47□□□□□ -0.73
BRCC3-206ENST00000399042 TOP1P11387 765 aaKnown RBP10.46□□□□□ -0.73
BRCC3-206ENST00000399042 EEF2P13639 858 aaKnown RBP10.46□□□□□ -0.73
BRCC3-206ENST00000399042 PTPRAP18433 802 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 MKRN3Q13064 507 aaKnown RBP10.46□□□□□ -0.73
BRCC3-206ENST00000399042 CST9Q5W186 159 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.46□□□□□ -0.73
BRCC3-206ENST00000399042 ERO1BQ86YB8 467 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 NUP133Q8WUM0 1156 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 BRF1Q92994 677 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 CLMNQ96JQ2 1002 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 GOPCQ9HD26 462 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 MTMR4Q9NYA4 1195 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 TMOD4Q9NZQ9 345 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 DAXXQ9UER7 740 aaPredicted RBP10.46□□□□□ -0.73
BRCC3-206ENST00000399042 SLC12A7Q9Y666 1083 aa10.46□□□□□ -0.73
BRCC3-206ENST00000399042 BAZ2AQ9UIF9 1905 aaKnown RBP10.46□□□□□ -0.74
BRCC3-206ENST00000399042 MYH1P12882 1939 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms