RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ENOX1Q8TC92 643 aaKnown RBP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 NELFBQ8WX92 580 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 PLA2G12BQ9BX93 195 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 RBM28Q9NW13 759 aaKnown RBP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 TNS3Q68CZ2 1445 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 ARHGAP6O43182 974 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC175P0C221 793 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 DMTNQ08495 405 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 DYMQ7RTS9 669 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 ZNF622Q969S3 477 aaKnown RBP eCLIP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 HINFPQ9BQA5 517 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CPVLQ9H3G5 476 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 ERLIN1O75477 346 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 IL6STP40189 918 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 NAPAP54920 295 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 SYCP1Q15431 976 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 JAKMIP3Q5VZ66 844 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 WWC2Q6AWC2 1192 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 PRPF38AQ8NAV1 312 aaKnown RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 CELF1Q92879 486 aaKnown RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 UBA5Q9GZZ9 404 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 CROCCQ5TZA2 2017 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 FOXP2O15409 715 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 KRT18P05783 430 aaKnown RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 ASIC1P78348 528 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 SPATA1Q5VX52 437 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 ZNF34Q8IZ26 560 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC148Q8NFR7 591 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 TGFBRAP1Q8WUH2 860 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 SLC4A9Q96Q91 983 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 SRRTQ9BXP5 876 aaKnown RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 DEF6Q9H4E7 631 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 WTIPA6NIX2 430 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 USP17L8P0C7I0 530 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 UBA7P41226 1012 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 TXKP42681 527 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 CLCN6P51797 869 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 PDE4DQ08499 809 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 MAPK8IP2Q13387 824 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 CUL4BQ13620 913 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 MTF1Q14872 753 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 MAP3K14Q99558 947 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 SYNRGQ9UMZ2 1314 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 PRPF3O43395 683 aaKnown RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 KCNQ2O43526 872 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 NCAPHQ15003 741 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 SPECC1LQ69YQ0 1117 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 IQUBQ8NA54 791 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 GOLGA1Q92805 767 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 DRC1Q96MC2 740 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 NBPF3Q9H094 633 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 ZNHIT6Q9NWK9 470 aaKnown RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 CPDO75976 1380 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 ABCC12Q96J65 1359 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 FGFR2P21802 821 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 GYS2P54840 703 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 PAK1Q13153 545 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 FAM98CQ17RN3 349 aaKnown RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 CTR9Q6PD62 1173 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 C3orf67Q6ZVT6 689 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 NBPF11Q86T75 865 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 TRIM34Q9BYJ4 488 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 TCEAL9Q9UHQ7 104 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 STX8Q9UNK0 236 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC66A2RUB6 948 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 TUBB4AP04350 444 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 STIM1Q13586 685 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 SETDB2Q96T68 719 aa5.57□□□□□ -1.52
SMAD4-202ENST00000398417 SRPRBQ9Y5M8 271 aaKnown RBP5.57□□□□□ -1.52
SMAD4-202ENST00000398417 LOC102724428A0A0B4J2F2 783 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 PP2D1A8MPX8 630 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 C6orf229H3BNL8 230 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 OAS2P29728 719 aaKnown RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 LIFRP42702 1097 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 LMAN1P49257 510 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 SIK1P57059 783 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 TRIM28Q13263 835 aaKnown RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 NYAP1Q6ZVC0 841 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 ADGRA1Q86SQ6 560 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 FAM170AA1A519 330 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 GOLGA6L9A6NEM1 432 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 CTIFO43310 598 aaKnown RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 LDHCP07864 332 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 HMGB2P26583 209 aaKnown RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 KLRK1P26718 216 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC96Q2M329 555 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC178Q5BJE1 867 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 FOXP4Q8IVH2 680 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 REXO1L1PQ8IX06 675 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 IRX2Q9BZI1 471 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 RMND1Q9NWS8 449 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 PHACTR2O75167 634 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 ALX1Q15699 326 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 EARS2Q5JPH6 523 aaKnown RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 SLC35F6Q8N357 371 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 STAG1Q8WVM7 1258 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 GDAQ9Y2T3 454 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 KIF13AQ9H1H9 1805 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 TRIM49BA6NDI0 452 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 ERVV-1B6SEH8 477 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms