RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TROAPQ12815 778 aa32.16■■■□□ 2.74
CPNE1-203ENST00000397442 RRP1BQ14684 758 aaKnown RBP32.16■■■□□ 2.74
CPNE1-203ENST00000397442 APOBEC3FQ8IUX4 373 aaKnown RBP32.16■■■□□ 2.74
CPNE1-203ENST00000397442 CCDC144CPQ8IYA2 1237 aa32.16■■■□□ 2.74
CPNE1-203ENST00000397442 GOLGA8AA7E2F4 631 aa32.15■■■□□ 2.74
CPNE1-203ENST00000397442 SHROOM1Q2M3G4 852 aaPredicted RBP32.15■■■□□ 2.74
CPNE1-203ENST00000397442 MTMR4Q9NYA4 1195 aa32.15■■■□□ 2.74
CPNE1-203ENST00000397442 ADD1P35611 737 aaKnown RBP32.15■■■□□ 2.74
CPNE1-203ENST00000397442 CATIPQ7Z7H3 387 aa32.15■■■□□ 2.74
CPNE1-203ENST00000397442 STX8Q9UNK0 236 aa32.15■■■□□ 2.74
CPNE1-203ENST00000397442 CHMP4CQ96CF2 233 aa32.14■■■□□ 2.74
CPNE1-203ENST00000397442 TMEM47Q9BQJ4 181 aa32.14■■■□□ 2.74
CPNE1-203ENST00000397442 DHX16O60231 1041 aaKnown RBP32.13■■■□□ 2.73
CPNE1-203ENST00000397442 DDAH1O94760 285 aa32.13■■■□□ 2.73
CPNE1-203ENST00000397442 JAG1P78504 1218 aa32.13■■■□□ 2.73
CPNE1-203ENST00000397442 FANCBQ8NB91 859 aa32.13■■■□□ 2.73
CPNE1-203ENST00000397442 KAT14Q9H8E8 782 aa32.13■■■□□ 2.73
CPNE1-203ENST00000397442 POLR2AP24928 1970 aaKnown RBP32.13■■■□□ 2.73
CPNE1-203ENST00000397442 PKP1Q13835 747 aa32.12■■■□□ 2.73
CPNE1-203ENST00000397442 MIGA2Q7L4E1 593 aa32.12■■■□□ 2.73
CPNE1-203ENST00000397442 CLEC10AQ8IUN9 316 aa32.12■■■□□ 2.73
CPNE1-203ENST00000397442 NUP133Q8WUM0 1156 aa32.12■■■□□ 2.73
CPNE1-203ENST00000397442 SCN4AP35499 1836 aa32.12■■■□□ 2.73
CPNE1-203ENST00000397442 PITPNM2Q9BZ72 1349 aa32.12■■■□□ 2.73
CPNE1-203ENST00000397442 PTPDC1A2A3K4 754 aa32.11■■■□□ 2.73
CPNE1-203ENST00000397442 MPHOSPH10O00566 681 aaKnown RBP32.11■■■□□ 2.73
CPNE1-203ENST00000397442 NTRK3Q16288 839 aa32.11■■■□□ 2.73
CPNE1-203ENST00000397442 PNMA1Q8ND90 353 aa32.11■■■□□ 2.73
CPNE1-203ENST00000397442 GDF11O95390 407 aa32.11■■■□□ 2.73
CPNE1-203ENST00000397442 GUCY1A2P33402 732 aa32.11■■■□□ 2.73
CPNE1-203ENST00000397442 RTN1Q16799 776 aa32.11■■■□□ 2.73
CPNE1-203ENST00000397442 WDR90Q96KV7 1748 aa32.1■■■□□ 2.73
CPNE1-203ENST00000397442 POTECB2RU33 542 aa32.1■■■□□ 2.73
CPNE1-203ENST00000397442 CALM1P0DP23 149 aa32.1■■■□□ 2.73
CPNE1-203ENST00000397442 CALM2P0DP24 149 aa32.1■■■□□ 2.73
CPNE1-203ENST00000397442 CALM3P0DP25 149 aa32.1■■■□□ 2.73
CPNE1-203ENST00000397442 ABCB5Q2M3G0 1257 aa32.1■■■□□ 2.73
CPNE1-203ENST00000397442 CPLX1O14810 134 aa32.09■■■□□ 2.73
CPNE1-203ENST00000397442 EPHX2P34913 555 aa32.09■■■□□ 2.73
CPNE1-203ENST00000397442 DDX11Q96FC9 970 aa32.09■■■□□ 2.73
CPNE1-203ENST00000397442 PPFIA3O75145 1194 aa32.08■■■□□ 2.73
CPNE1-203ENST00000397442 TOP1P11387 765 aaKnown RBP32.08■■■□□ 2.73
CPNE1-203ENST00000397442 PPP2R5BQ15173 497 aa32.08■■■□□ 2.73
CPNE1-203ENST00000397442 NBPF12Q5TAG4 269 aaPredicted RBP32.08■■■□□ 2.73
CPNE1-203ENST00000397442 TMEM179Q6ZVK1 233 aa32.08■■■□□ 2.73
CPNE1-203ENST00000397442 USP50Q70EL3 339 aaPredicted RBP32.08■■■□□ 2.73
CPNE1-203ENST00000397442 TTLL1O95922 423 aa32.08■■■□□ 2.73
CPNE1-203ENST00000397442 FDPSP14324 419 aaKnown RBP32.08■■■□□ 2.73
CPNE1-203ENST00000397442 HMGN5P82970 282 aaKnown RBP32.08■■■□□ 2.73
CPNE1-203ENST00000397442 ZDHHC9Q9Y397 364 aa32.08■■■□□ 2.73
CPNE1-203ENST00000397442 PPP2R3BQ9Y5P8 575 aa32.08■■■□□ 2.73
CPNE1-203ENST00000397442 SEPT2Q15019 361 aa32.07■■■□□ 2.72
CPNE1-203ENST00000397442 MYH4Q9Y623 1939 aa32.07■■■□□ 2.72
CPNE1-203ENST00000397442 GH2P01242 217 aa32.06■■■□□ 2.72
CPNE1-203ENST00000397442 SYT1P21579 422 aa32.06■■■□□ 2.72
CPNE1-203ENST00000397442 RAB3GAP1Q15042 981 aa32.06■■■□□ 2.72
CPNE1-203ENST00000397442 MAP3K14Q99558 947 aa32.06■■■□□ 2.72
CPNE1-203ENST00000397442 KANSL2Q9H9L4 492 aa32.06■■■□□ 2.72
CPNE1-203ENST00000397442 CCDC196A0A1B0GTZ2 297 aa32.05■■■□□ 2.72
CPNE1-203ENST00000397442 PHF20L1A8MW92 1017 aa32.05■■■□□ 2.72
CPNE1-203ENST00000397442 NUCB2P80303 420 aa32.05■■■□□ 2.72
CPNE1-203ENST00000397442 PRAMEF18Q5VWM3 479 aa32.05■■■□□ 2.72
CPNE1-203ENST00000397442 SIAH1Q8IUQ4 282 aa32.05■■■□□ 2.72
CPNE1-203ENST00000397442 TAF1DQ9H5J8 278 aaPredicted RBP32.05■■■□□ 2.72
CPNE1-203ENST00000397442 CLIP2Q9UDT6 1046 aa32.05■■■□□ 2.72
CPNE1-203ENST00000397442 IFNAR1P17181 557 aa32.05■■■□□ 2.72
CPNE1-203ENST00000397442 IQCA1LA6NCM1 817 aa32.04■■■□□ 2.72
CPNE1-203ENST00000397442 RBM28Q9NW13 759 aaKnown RBP32.04■■■□□ 2.72
CPNE1-203ENST00000397442 NYAP2Q9P242 653 aa32.04■■■□□ 2.72
CPNE1-203ENST00000397442 CDKL5O76039 1030 aa32.03■■■□□ 2.72
CPNE1-203ENST00000397442 CAP2P40123 477 aa32.03■■■□□ 2.72
CPNE1-203ENST00000397442 FUT2Q10981 343 aa32.03■■■□□ 2.72
CPNE1-203ENST00000397442 GRM4Q14833 912 aa32.03■■■□□ 2.72
CPNE1-203ENST00000397442 PPP4R3BQ5MIZ7 849 aa32.03■■■□□ 2.72
CPNE1-203ENST00000397442 CPLX2Q6PUV4 134 aaKnown RBP32.03■■■□□ 2.72
CPNE1-203ENST00000397442 NBPF11Q86T75 865 aa32.03■■■□□ 2.72
CPNE1-203ENST00000397442 CMTR1Q8N1G2 835 aaKnown RBP32.03■■■□□ 2.72
CPNE1-203ENST00000397442 PHKBQ93100 1093 aa32.03■■■□□ 2.72
CPNE1-203ENST00000397442 CABP5Q9NP86 173 aa32.03■■■□□ 2.72
CPNE1-203ENST00000397442 SSC5DA1L4H1 1573 aa32.02■■■□□ 2.72
CPNE1-203ENST00000397442 BRD1O95696 1058 aa32.02■■■□□ 2.72
CPNE1-203ENST00000397442 EEF2P13639 858 aaKnown RBP32.02■■■□□ 2.72
CPNE1-203ENST00000397442 LRRC47Q8N1G4 583 aaKnown RBP32.02■■■□□ 2.72
CPNE1-203ENST00000397442 CTCFLQ8NI51 663 aaPredicted RBP32.02■■■□□ 2.72
CPNE1-203ENST00000397442 ZC3H15Q8WU90 426 aaKnown RBP32.02■■■□□ 2.72
CPNE1-203ENST00000397442 MKL1Q969V6 931 aa32.02■■■□□ 2.72
CPNE1-203ENST00000397442 DCPSQ96C86 337 aaKnown RBP32.02■■■□□ 2.72
CPNE1-203ENST00000397442 ZBTB21Q9ULJ3 1066 aa32.02■■■□□ 2.72
CPNE1-203ENST00000397442 PLEKHA8P1O95397 391 aa32.02■■■□□ 2.72
CPNE1-203ENST00000397442 LARP1BQ659C4 914 aaKnown RBP32.02■■■□□ 2.72
CPNE1-203ENST00000397442 TMTC3Q6ZXV5 915 aa32.02■■■□□ 2.72
CPNE1-203ENST00000397442 RASGRP2Q7LDG7 609 aa32.02■■■□□ 2.72
CPNE1-203ENST00000397442 ORC3Q9UBD5 711 aaPredicted RBP32.02■■■□□ 2.72
CPNE1-203ENST00000397442 STX6O43752 255 aa32.01■■■□□ 2.71
CPNE1-203ENST00000397442 ICA1Q05084 483 aa32.01■■■□□ 2.71
CPNE1-203ENST00000397442 MAD2L2Q9UI95 211 aa32.01■■■□□ 2.71
CPNE1-203ENST00000397442 ATAD5Q96QE3 1844 aa32■■■□□ 2.71
CPNE1-203ENST00000397442 PDCP20941 246 aa32■■■□□ 2.71
CPNE1-203ENST00000397442 FAM184AQ8NB25 1140 aa32■■■□□ 2.71
CPNE1-203ENST00000397442 FMNL1O95466 1100 aaPredicted RBP31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms