RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ZAP70P43403 619 aa20.77■□□□□ 0.92
TNFSF13-205ENST00000396545 GCLCP48506 637 aaPredicted RBP20.77■□□□□ 0.92
TNFSF13-205ENST00000396545 MAPKAPK5Q8IW41 473 aa20.77■□□□□ 0.92
TNFSF13-205ENST00000396545 ANO2Q9NQ90 1003 aa20.77■□□□□ 0.92
TNFSF13-205ENST00000396545 PIH1D3Q9NQM4 214 aaKnown RBP20.77■□□□□ 0.92
TNFSF13-205ENST00000396545 MCCP23508 829 aa20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 FXR1P51114 621 aaKnown RBP eCLIP20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 PABPC4Q13310 644 aaKnown RBP eCLIP20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 LRRFIP1Q32MZ4 808 aaKnown RBP20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 COA7Q96BR5 231 aa20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 WDR18Q9BV38 432 aa20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 ASCC2Q9H1I8 757 aaPredicted RBP20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 AS3MTQ9HBK9 375 aa20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 DIAPH3Q9NSV4 1193 aa20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 CHMP5Q9NZZ3 219 aa20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 ASNSP08243 561 aa20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 JAG1P78504 1218 aa20.76■□□□□ 0.91
TNFSF13-205ENST00000396545 MTMR2Q13614 643 aa20.75■□□□□ 0.91
TNFSF13-205ENST00000396545 FOXP4Q8IVH2 680 aaPredicted RBP20.75■□□□□ 0.91
TNFSF13-205ENST00000396545 PALD1Q9ULE6 856 aa20.75■□□□□ 0.91
TNFSF13-205ENST00000396545 SZT2Q5T011 3432 aa20.75■□□□□ 0.91
TNFSF13-205ENST00000396545 RAD50Q92878 1312 aa20.74■□□□□ 0.91
TNFSF13-205ENST00000396545 SGPL1O95470 568 aa20.74■□□□□ 0.91
TNFSF13-205ENST00000396545 BACE1P56817 501 aa20.74■□□□□ 0.91
TNFSF13-205ENST00000396545 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
TNFSF13-205ENST00000396545 FSD1Q9BTV5 496 aa20.74■□□□□ 0.91
TNFSF13-205ENST00000396545 PAK6Q9NQU5 681 aaPredicted RBP20.74■□□□□ 0.91
TNFSF13-205ENST00000396545 FARP2O94887 1054 aaPredicted RBP20.73■□□□□ 0.91
TNFSF13-205ENST00000396545 HSPA4P34932 840 aa20.73■□□□□ 0.91
TNFSF13-205ENST00000396545 SHROOM1Q2M3G4 852 aaPredicted RBP20.73■□□□□ 0.91
TNFSF13-205ENST00000396545 KBTBD3Q8NAB2 608 aa20.73■□□□□ 0.91
TNFSF13-205ENST00000396545 DPF3Q92784 378 aa20.73■□□□□ 0.91
TNFSF13-205ENST00000396545 LSG1Q9H089 658 aaKnown RBP20.73■□□□□ 0.91
TNFSF13-205ENST00000396545 GINM1Q9NU53 330 aa20.73■□□□□ 0.91
TNFSF13-205ENST00000396545 PAG1Q9NWQ8 432 aa20.73■□□□□ 0.91
TNFSF13-205ENST00000396545 ST18O60284 1047 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 CYP7A1P22680 504 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 DYNLL1P63167 89 aaKnown RBP20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 CRACR2BQ8N4Y2 399 aaPredicted RBP20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 SPRYD3Q8NCJ5 442 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 HTATIP2Q9BUP3 242 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 TAOK2Q9UL54 1235 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 CIZ1Q9ULV3 898 aaPredicted RBP20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 GDF11O95390 407 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 HOXA7P31268 230 aaPredicted RBP20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 DEFB118Q96PH6 123 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 DNAJC2Q99543 621 aaKnown RBP20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 TRIM34Q9BYJ4 488 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 MORF4L1Q9UBU8 362 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 SAP30BPQ9UHR5 308 aaKnown RBP20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 ZBTB21Q9ULJ3 1066 aa20.72■□□□□ 0.91
TNFSF13-205ENST00000396545 IDH1O75874 414 aaKnown RBP20.71■□□□□ 0.91
TNFSF13-205ENST00000396545 CAPN2P17655 700 aa20.71■□□□□ 0.91
TNFSF13-205ENST00000396545 IRX3P78415 501 aaPredicted RBP20.71■□□□□ 0.91
TNFSF13-205ENST00000396545 TTF1Q15361 905 aaPredicted RBP20.71■□□□□ 0.91
TNFSF13-205ENST00000396545 CWC27Q6UX04 472 aaKnown RBP20.71■□□□□ 0.91
TNFSF13-205ENST00000396545 CERS3Q8IU89 383 aa20.71■□□□□ 0.91
TNFSF13-205ENST00000396545 TMOD4Q9NZQ9 345 aa20.71■□□□□ 0.91
TNFSF13-205ENST00000396545 GJD2Q9UKL4 321 aa20.71■□□□□ 0.91
TNFSF13-205ENST00000396545 C19orf81C9J6K1 198 aa20.7■□□□□ 0.9
TNFSF13-205ENST00000396545 HLA-DOAP06340 250 aa20.7■□□□□ 0.9
TNFSF13-205ENST00000396545 KIAA1211Q6ZU35 1233 aa20.7■□□□□ 0.9
TNFSF13-205ENST00000396545 CRISPLD2Q9H0B8 497 aa20.7■□□□□ 0.9
TNFSF13-205ENST00000396545 NDUFB9Q9Y6M9 179 aa20.7■□□□□ 0.9
TNFSF13-205ENST00000396545 USP17L10C9JJH3 530 aa20.69■□□□□ 0.9
TNFSF13-205ENST00000396545 HMGCRP04035 888 aa20.69■□□□□ 0.9
TNFSF13-205ENST00000396545 CHRDL2Q6WN34 429 aa20.69■□□□□ 0.9
TNFSF13-205ENST00000396545 MAGEB6Q8N7X4 407 aa20.69■□□□□ 0.9
TNFSF13-205ENST00000396545 MIGA1Q8NAN2 632 aa20.69■□□□□ 0.9
TNFSF13-205ENST00000396545 TFRCP02786 760 aaKnown RBP20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 ZFYP08048 801 aaPredicted RBP20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 TMED8Q6PL24 325 aaPredicted RBP20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 P2RX7Q99572 595 aaKnown RBP20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 PLXNB2O15031 1838 aa20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 GOLIM4O00461 696 aa20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 HERVK_113P62684 666 aa20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 TXNRD2Q9NNW7 524 aa20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 MYH1P12882 1939 aa20.68■□□□□ 0.9
TNFSF13-205ENST00000396545 MCM2P49736 904 aa20.67■□□□□ 0.9
TNFSF13-205ENST00000396545 MAP3K12Q12852 859 aa20.67■□□□□ 0.9
TNFSF13-205ENST00000396545 TATDN1Q6P1N9 297 aa20.67■□□□□ 0.9
TNFSF13-205ENST00000396545 EHD4Q9H223 541 aa20.67■□□□□ 0.9
TNFSF13-205ENST00000396545 NR2E3Q9Y5X4 410 aa20.67■□□□□ 0.9
TNFSF13-205ENST00000396545 PEX10O60683 326 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 GH2P01242 217 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 USP5P45974 858 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 ZSCAN25Q6NSZ9 544 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 GPRC5AQ8NFJ5 357 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 KCNB2Q92953 911 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 PRO3102Q9H379 93 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 EMILIN3Q9NT22 766 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 RBM27Q9P2N5 1060 aaKnown RBP20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 LAMA3Q16787 3333 aa20.66■□□□□ 0.9
TNFSF13-205ENST00000396545 NMIQ13287 307 aaPredicted RBP20.65■□□□□ 0.9
TNFSF13-205ENST00000396545 HELLSQ9NRZ9 838 aa20.65■□□□□ 0.9
TNFSF13-205ENST00000396545 RBPJLQ9UBG7 517 aa20.65■□□□□ 0.9
TNFSF13-205ENST00000396545 SERPINB13Q9UIV8 391 aa20.65■□□□□ 0.9
TNFSF13-205ENST00000396545 DDX60LQ5H9U9 1706 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms