RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 USP17L10C9JJH3 530 aa22.74■■□□□ 1.23
HOXA9-202ENST00000396345 RANBP6O60518 1105 aaKnown RBP22.74■■□□□ 1.23
HOXA9-202ENST00000396345 TFAP4Q01664 338 aa22.74■■□□□ 1.23
HOXA9-202ENST00000396345 RRP12Q5JTH9 1297 aaKnown RBP22.74■■□□□ 1.23
HOXA9-202ENST00000396345 IFNL1Q8IU54 200 aa22.74■■□□□ 1.23
HOXA9-202ENST00000396345 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.74■■□□□ 1.23
HOXA9-202ENST00000396345 KANSL2Q9H9L4 492 aa22.74■■□□□ 1.23
HOXA9-202ENST00000396345 PTPRFP10586 1907 aa22.73■■□□□ 1.23
HOXA9-202ENST00000396345 BACE1P56817 501 aa22.73■■□□□ 1.23
HOXA9-202ENST00000396345 ICA1Q05084 483 aa22.73■■□□□ 1.23
HOXA9-202ENST00000396345 MTMR2Q13614 643 aa22.73■■□□□ 1.23
HOXA9-202ENST00000396345 FASTKD5Q7L8L6 764 aaKnown RBP22.73■■□□□ 1.23
HOXA9-202ENST00000396345 NEDD1Q8NHV4 660 aa22.73■■□□□ 1.23
HOXA9-202ENST00000396345 PTPN18Q99952 460 aa22.73■■□□□ 1.23
HOXA9-202ENST00000396345 BEGAINQ9BUH8 593 aa22.73■■□□□ 1.23
HOXA9-202ENST00000396345 WBP1LQ9NX94 342 aa22.73■■□□□ 1.23
HOXA9-202ENST00000396345 GREB1LQ9C091 1923 aaPredicted RBP22.72■■□□□ 1.23
HOXA9-202ENST00000396345 TSPY2A6NKD2 308 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 IGF2BP3O00425 579 aaKnown RBP eCLIP22.72■■□□□ 1.23
HOXA9-202ENST00000396345 CYP21A2P08686 494 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 HMGCS2P54868 508 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 MOGSQ13724 837 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 OTUD7BQ6GQQ9 843 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 GADL1Q6ZQY3 521 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 CLEC10AQ8IUN9 316 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 ACER1Q8TDN7 264 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 FEZ1Q99689 392 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 ARHGEF10LQ9HCE6 1279 aa22.72■■□□□ 1.23
HOXA9-202ENST00000396345 IGKV6D-41A0A0C4DH26 115 aa22.71■■□□□ 1.23
HOXA9-202ENST00000396345 C19orf81C9J6K1 198 aa22.71■■□□□ 1.23
HOXA9-202ENST00000396345 REC8O95072 547 aa22.71■■□□□ 1.23
HOXA9-202ENST00000396345 ATP2B2Q01814 1243 aa22.71■■□□□ 1.23
HOXA9-202ENST00000396345 SH3D19Q5HYK7 790 aa22.71■■□□□ 1.23
HOXA9-202ENST00000396345 NEDD4P46934 1319 aa22.71■■□□□ 1.23
HOXA9-202ENST00000396345 PLIN4Q96Q06 1357 aa22.71■■□□□ 1.23
HOXA9-202ENST00000396345 BTBD19C9JJ37 291 aa22.7■■□□□ 1.22
HOXA9-202ENST00000396345 EEF2P13639 858 aaKnown RBP22.7■■□□□ 1.22
HOXA9-202ENST00000396345 USP17L2Q6R6M4 530 aa22.7■■□□□ 1.22
HOXA9-202ENST00000396345 SIAH1Q8IUQ4 282 aa22.7■■□□□ 1.22
HOXA9-202ENST00000396345 PROCA1Q8NCQ7 364 aaPredicted RBP22.7■■□□□ 1.22
HOXA9-202ENST00000396345 ESR2Q92731 530 aa22.7■■□□□ 1.22
HOXA9-202ENST00000396345 KIAA1683Q9H0B3 1180 aa22.7■■□□□ 1.22
HOXA9-202ENST00000396345 RNF186Q9NXI6 227 aa22.7■■□□□ 1.22
HOXA9-202ENST00000396345 TMOD4Q9NZQ9 345 aa22.7■■□□□ 1.22
HOXA9-202ENST00000396345 A0A1W2PRG0 241 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 SLC27A2O14975 620 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 ALDH1A1P00352 501 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 NT5C2P49902 561 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 USP14P54578 494 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 DGKZQ13574 1117 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 NECTIN1Q15223 517 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 ZYXQ15942 572 aaKnown RBP22.69■■□□□ 1.22
HOXA9-202ENST00000396345 ANKRD23Q86SG2 305 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 FAM43AQ8N2R8 423 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 CEP95Q96GE4 821 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 KRT23Q9C075 422 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 SH2D4AQ9H788 454 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 CNNM2Q9H8M5 875 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 MTMR4Q9NYA4 1195 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 NYAP2Q9P242 653 aa22.69■■□□□ 1.22
HOXA9-202ENST00000396345 TRPA1O75762 1119 aa22.68■■□□□ 1.22
HOXA9-202ENST00000396345 CREB3L3Q68CJ9 461 aa22.68■■□□□ 1.22
HOXA9-202ENST00000396345 GPAT2Q6NUI2 795 aa22.68■■□□□ 1.22
HOXA9-202ENST00000396345 EMILIN3Q9NT22 766 aa22.68■■□□□ 1.22
HOXA9-202ENST00000396345 TMX2Q9Y320 296 aa22.68■■□□□ 1.22
HOXA9-202ENST00000396345 TAF6LQ9Y6J9 622 aa22.68■■□□□ 1.22
HOXA9-202ENST00000396345 LOC285556D6RIA3 1793 aa22.68■■□□□ 1.22
HOXA9-202ENST00000396345 B4E1Z4 1266 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 E7EWF7 191 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 CA12O43570 354 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 KDM4AO75164 1064 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 TRDNQ13061 729 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 PPP4R3BQ5MIZ7 849 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 RNF20Q5VTR2 975 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 NKX2-3Q8TAU0 364 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 ZCCHC17Q9NP64 241 aaKnown RBP22.67■■□□□ 1.22
HOXA9-202ENST00000396345 IL17RBQ9NRM6 502 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 SAGE1Q9NXZ1 904 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 CLIP2Q9UDT6 1046 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 AGTPBP1Q9UPW5 1226 aa22.67■■□□□ 1.22
HOXA9-202ENST00000396345 PDHXO00330 501 aa22.66■■□□□ 1.22
HOXA9-202ENST00000396345 NMT2O60551 498 aa22.66■■□□□ 1.22
HOXA9-202ENST00000396345 TTLL1O95922 423 aa22.66■■□□□ 1.22
HOXA9-202ENST00000396345 TREML2Q5T2D2 321 aa22.66■■□□□ 1.22
HOXA9-202ENST00000396345 TNS4Q8IZW8 715 aa22.66■■□□□ 1.22
HOXA9-202ENST00000396345 C12orf42Q96LP6 360 aa22.66■■□□□ 1.22
HOXA9-202ENST00000396345 TCP11L1Q9NUJ3 509 aa22.66■■□□□ 1.22
HOXA9-202ENST00000396345 STOX1Q6ZVD7 989 aa22.65■■□□□ 1.22
HOXA9-202ENST00000396345 MKL1Q969V6 931 aa22.65■■□□□ 1.22
HOXA9-202ENST00000396345 SLC45A1Q9Y2W3 748 aa22.65■■□□□ 1.22
HOXA9-202ENST00000396345 MYH4Q9Y623 1939 aa22.65■■□□□ 1.22
HOXA9-202ENST00000396345 EPB41L2O43491 1005 aaKnown RBP22.64■■□□□ 1.21
HOXA9-202ENST00000396345 PABPC4Q13310 644 aaKnown RBP eCLIP22.64■■□□□ 1.21
HOXA9-202ENST00000396345 TAF1CQ15572 869 aaPredicted RBP22.64■■□□□ 1.21
HOXA9-202ENST00000396345 RALYLQ86SE5 291 aaKnown RBP22.64■■□□□ 1.21
HOXA9-202ENST00000396345 NCOA7Q8NI08 942 aa22.64■■□□□ 1.21
HOXA9-202ENST00000396345 VCPKMTQ9H867 229 aa22.64■■□□□ 1.21
HOXA9-202ENST00000396345 GOPCQ9HD26 462 aa22.64■■□□□ 1.21
HOXA9-202ENST00000396345 ZSWIM5Q9P217 1185 aa22.64■■□□□ 1.21
HOXA9-202ENST00000396345 STX8Q9UNK0 236 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms