RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SPECC1LQ69YQ0 1117 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 ZFP91Q96JP5 570 aaPredicted RBP7.41□□□□□ -1.22
BDNF-203ENST00000395978 COL15A1P39059 1388 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 SYNRGQ9UMZ2 1314 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 CDC27P30260 824 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 TNNI2P48788 182 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 UBXN1Q04323 297 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 BLIDQ8IZY5 108 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 TBC1D22AQ8WUA7 517 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 CUL5Q93034 780 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 ZSWIM4Q9H7M6 989 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 MINPP1Q9UNW1 487 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 PEAK1Q9H792 1746 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 CYP2D7A0A087X1C5 515 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 BICDL2A1A5D9 508 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 FDPSP14324 419 aaKnown RBP7.41□□□□□ -1.22
BDNF-203ENST00000395978 CCT6AP40227 531 aaKnown RBP7.41□□□□□ -1.22
BDNF-203ENST00000395978 ST3GAL1Q11201 340 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 PAK1Q13153 545 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 PTGDRQ13258 359 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 KARSQ15046 597 aaKnown RBP7.41□□□□□ -1.22
BDNF-203ENST00000395978 CCDC40Q4G0X9 1142 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 KRT25Q7Z3Z0 450 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 BRIP1Q9BX63 1249 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 CSRNP2Q9H175 543 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 BCL2L12Q9HB09 334 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 CTNND2Q9UQB3 1225 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 LEMD3Q9Y2U8 911 aa7.41□□□□□ -1.22
BDNF-203ENST00000395978 LUC7L2Q9Y383 392 aaKnown RBP7.41□□□□□ -1.22
BDNF-203ENST00000395978 STK36Q9NRP7 1315 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 CCDC66A2RUB6 948 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 PRPF3O43395 683 aaKnown RBP7.4□□□□□ -1.22
BDNF-203ENST00000395978 ANTXR2P58335 489 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 NONOQ15233 471 aaKnown RBP eCLIP7.4□□□□□ -1.22
BDNF-203ENST00000395978 LONRF3Q496Y0 759 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 VPS16Q9H269 839 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 MAPK8IP1Q9UQF2 711 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 PLEKHG2Q9H7P9 1386 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 PIK3C2AO00443 1686 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 POTEB2H3BUK9 544 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 RPS6KA4O75676 772 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 CYLC1P35663 651 aaPredicted RBP7.4□□□□□ -1.22
BDNF-203ENST00000395978 TNNT3P45378 269 aaPredicted RBP7.4□□□□□ -1.22
BDNF-203ENST00000395978 TRAPPC10P48553 1259 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 MRPL12P52815 198 aaKnown RBP7.4□□□□□ -1.22
BDNF-203ENST00000395978 RCAN1P53805 252 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 MFSD14BQ5SR56 506 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 FEZ1Q99689 392 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 LZTFL1Q9NQ48 299 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 DLG5Q8TDM6 1919 aa7.4□□□□□ -1.22
BDNF-203ENST00000395978 PNPLA7Q6ZV29 1317 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 PTPREP23469 700 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 ATP2B4P23634 1241 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 PPP1R2P41236 205 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 MECOMQ03112 1051 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 TDRD12Q587J7 1177 aaKnown RBP7.4□□□□□ -1.23
BDNF-203ENST00000395978 KRT222Q8N1A0 295 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 EHBP1Q8NDI1 1231 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 IGDCC4Q8TDY8 1250 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 EYA3Q99504 573 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 SRP68Q9UHB9 627 aaKnown RBP7.4□□□□□ -1.23
BDNF-203ENST00000395978 PCDHB6Q9Y5E3 794 aa7.4□□□□□ -1.23
BDNF-203ENST00000395978 SRPRBQ9Y5M8 271 aaKnown RBP7.4□□□□□ -1.23
BDNF-203ENST00000395978 RGPD8O14715 1765 aaPredicted RBP7.39□□□□□ -1.23
BDNF-203ENST00000395978 AKR1B10O60218 316 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 ERCC5P28715 1186 aaPredicted RBP7.39□□□□□ -1.23
BDNF-203ENST00000395978 PLA2G4DQ86XP0 818 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 SYMPKQ92797 1274 aaKnown RBP7.39□□□□□ -1.23
BDNF-203ENST00000395978 CELF1Q92879 486 aaKnown RBP7.39□□□□□ -1.23
BDNF-203ENST00000395978 GSDMAQ96QA5 445 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 AGXT2Q9BYV1 514 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 BLZF1Q9H2G9 400 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 KIF1AQ12756 1690 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 CTAGE9A4FU28 777 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 PSDA5PKW4 1024 aaPredicted RBP7.39□□□□□ -1.23
BDNF-203ENST00000395978 KIF28PB7ZC32 967 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 KLRF2D3W0D1 207 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 KCNQ2O43526 872 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
BDNF-203ENST00000395978 CAMTA2O94983 1202 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 SLFN14P0C7P3 912 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 ETF1P62495 437 aaKnown RBP7.39□□□□□ -1.23
BDNF-203ENST00000395978 SPATA1Q5VX52 437 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 RESP18Q5W5W9 173 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 GALNT17Q6IS24 598 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 GPCPD1Q9NPB8 672 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 NARFQ9UHQ1 456 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 XDHP47989 1333 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 UBN2Q6ZU65 1347 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 NFAT5O94916 1531 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 CCNT1O60563 726 aaKnown RBP7.39□□□□□ -1.23
BDNF-203ENST00000395978 PDE4DQ08499 809 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 TRIM14Q14142 442 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 ZNF569Q5MCW4 686 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 FAM196AQ6ZSG2 479 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 SV2BQ7L1I2 683 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 UBA5Q9GZZ9 404 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 ARFGAP3Q9NP61 516 aa7.39□□□□□ -1.23
BDNF-203ENST00000395978 TXKP42681 527 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 ADKP55263 362 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms