RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 RBL2Q08999 1139 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 CCDC96Q2M329 555 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 CCDC178Q5BJE1 867 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 ZNF446Q9NWS9 450 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 ZSWIM5Q9P217 1185 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 PCDHB6Q9Y5E3 794 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 PDE4BQ07343 736 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 ODF2Q5BJF6 829 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
NFKB1-202ENST00000394820 ADAM21Q9UKJ8 722 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 FOXP2O15409 715 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 N4BP1O75113 896 aaKnown RBP14.95□□□□□ -0.02
NFKB1-202ENST00000394820 SLC39A14Q15043 492 aa14.95□□□□□ -0.02
NFKB1-202ENST00000394820 EFCAB8A8MWE9 144 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 NYAP1Q6ZVC0 841 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 NBPF11Q86T75 865 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 C8orf37Q96NL8 207 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 PSDA5PKW4 1024 aaPredicted RBP14.94□□□□□ -0.02
NFKB1-202ENST00000394820 CHRNDQ07001 517 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 APOA5Q6Q788 366 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 SARM1Q6SZW1 724 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 IFT81Q8WYA0 676 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 HPS5Q9UPZ3 1129 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 A0A0U1RQJ8 604 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 CDC25BP30305 580 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 PLA2G4AP47712 749 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 SHC4Q6S5L8 630 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 PIK3AP1Q6ZUJ8 805 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 ILDR1Q86SU0 546 aaPredicted RBP14.94□□□□□ -0.02
NFKB1-202ENST00000394820 ATRIPQ8WXE1 791 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 WASF1Q92558 559 aa14.94□□□□□ -0.02
NFKB1-202ENST00000394820 GNL3LQ9NVN8 582 aaKnown RBP14.94□□□□□ -0.02
NFKB1-202ENST00000394820 GUCY1A2P33402 732 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 TRIM28Q13263 835 aaKnown RBP14.93□□□□□ -0.02
NFKB1-202ENST00000394820 RIN2Q8WYP3 895 aaPredicted RBP14.93□□□□□ -0.02
NFKB1-202ENST00000394820 NGLY1Q96IV0 654 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 STRBPQ96SI9 672 aaKnown RBP14.93□□□□□ -0.02
NFKB1-202ENST00000394820 ABCB6Q9NP58 842 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 FAM205CA6NFA0 338 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
NFKB1-202ENST00000394820 HDXQ7Z353 690 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 CSRNP2Q9H175 543 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 STX8Q9UNK0 236 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 GOLGA6L9A6NEM1 432 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 IL6STP40189 918 aaPredicted RBP14.93□□□□□ -0.02
NFKB1-202ENST00000394820 UBA7P41226 1012 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 HLTFQ14527 1009 aaKnown RBP eCLIP14.93□□□□□ -0.02
NFKB1-202ENST00000394820 KCTD19Q17RG1 926 aaPredicted RBP14.93□□□□□ -0.02
NFKB1-202ENST00000394820 MMRN2Q9H8L6 949 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 CEP131Q9UPN4 1083 aa14.93□□□□□ -0.02
NFKB1-202ENST00000394820 AKR1B10O60218 316 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 LIG3P49916 1009 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 SETQ01105 290 aaPredicted RBP14.92□□□□□ -0.02
NFKB1-202ENST00000394820 CC2D1AQ6P1N0 951 aaPredicted RBP14.92□□□□□ -0.02
NFKB1-202ENST00000394820 ANKRD18AQ8IVF6 992 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
NFKB1-202ENST00000394820 OXER1Q8TDS5 423 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
NFKB1-202ENST00000394820 MROH7-TTC4A0A0A0MT08 1334 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 SYNRGQ9UMZ2 1314 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 CXCR5P32302 372 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 FMR1Q06787 632 aaKnown RBP eCLIP14.92□□□□□ -0.02
NFKB1-202ENST00000394820 ITPK1Q13572 414 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 CCDC47Q96A33 483 aaKnown RBP14.92□□□□□ -0.02
NFKB1-202ENST00000394820 HDAC6Q9UBN7 1215 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 MAN1B1Q9UKM7 699 aa14.92□□□□□ -0.02
NFKB1-202ENST00000394820 SPA17Q15506 151 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 ERFEQ4G0M1 354 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 VSTM4Q8IW00 320 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 ENGASEQ8NFI3 743 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 CTCFLQ8NI51 663 aaPredicted RBP14.91□□□□□ -0.02
NFKB1-202ENST00000394820 ATP1A2P50993 1020 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 NOSTRINQ8IVI9 506 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 AFDNP55196 1824 aaKnown RBP14.91□□□□□ -0.02
NFKB1-202ENST00000394820 KIAA0754O94854 1291 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 EPS15P42566 896 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 CYP27A1Q02318 531 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 IFIT1BQ5T764 474 aaKnown RBP14.91□□□□□ -0.02
NFKB1-202ENST00000394820 KCTD16Q68DU8 428 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 RASGRP4Q8TDF6 673 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 CDK5RAP3Q96JB5 506 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 MRPL44Q9H9J2 332 aaKnown RBP14.91□□□□□ -0.02
NFKB1-202ENST00000394820 EPB41L4AQ9HCS5 686 aaPredicted RBP14.91□□□□□ -0.02
NFKB1-202ENST00000394820 ADAMTSL3P82987 1691 aa14.91□□□□□ -0.02
NFKB1-202ENST00000394820 SH2B2O14492 632 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-202ENST00000394820 CUTAO60888 179 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 STAT6P42226 847 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 STIM1Q13586 685 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 CAVIN4Q5BKX8 364 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 FAM47AQ5JRC9 791 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 CATIPQ7Z7H3 387 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 CEP112Q8N8E3 955 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 NAPGQ99747 312 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-202ENST00000394820 POLR3EQ9NVU0 708 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 FHOD1Q9Y613 1164 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 A0A1W2PQ27 194 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 A0A1W2PQ64 194 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 A0A1W2PQD8 194 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 MYO1CO00159 1063 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 UBE3CQ15386 1083 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms