RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CDK8P49336 464 aa36.84■■■■□ 3.49
CMTM4-202ENST00000394106 ZMYM1Q5SVZ6 1142 aa36.84■■■■□ 3.49
CMTM4-202ENST00000394106 FCGRTP55899 365 aa36.83■■■■□ 3.49
CMTM4-202ENST00000394106 GIMAP6Q6P9H5 292 aa36.83■■■■□ 3.49
CMTM4-202ENST00000394106 C16orf86Q6ZW13 317 aa36.83■■■■□ 3.49
CMTM4-202ENST00000394106 MGAMO43451 1857 aa36.83■■■■□ 3.49
CMTM4-202ENST00000394106 HOXA7P31268 230 aaPredicted RBP36.82■■■■□ 3.48
CMTM4-202ENST00000394106 TMEM179Q6ZVK1 233 aa36.82■■■■□ 3.48
CMTM4-202ENST00000394106 MINDY4BA8MYZ0 360 aa36.81■■■■□ 3.48
CMTM4-202ENST00000394106 AKR1B1P15121 316 aa36.81■■■■□ 3.48
CMTM4-202ENST00000394106 HOXD10P28358 340 aa36.81■■■■□ 3.48
CMTM4-202ENST00000394106 GCLCP48506 637 aaPredicted RBP36.81■■■■□ 3.48
CMTM4-202ENST00000394106 TDO2P48775 406 aa36.81■■■■□ 3.48
CMTM4-202ENST00000394106 USP14P54578 494 aa36.81■■■■□ 3.48
CMTM4-202ENST00000394106 KIAA1683Q9H0B3 1180 aa36.81■■■■□ 3.48
CMTM4-202ENST00000394106 EPB41L4AQ9HCS5 686 aaPredicted RBP36.81■■■■□ 3.48
CMTM4-202ENST00000394106 SBK1Q52WX2 424 aa36.8■■■■□ 3.48
CMTM4-202ENST00000394106 STK11IPQ8N1F8 1099 aa36.8■■■■□ 3.48
CMTM4-202ENST00000394106 SRRDQ9UH36 339 aa36.8■■■■□ 3.48
CMTM4-202ENST00000394106 PRMT2P55345 433 aa36.79■■■■□ 3.48
CMTM4-202ENST00000394106 FAM110CQ1W6H9 321 aa36.79■■■■□ 3.48
CMTM4-202ENST00000394106 SLC9C1Q4G0N8 1177 aa36.79■■■■□ 3.48
CMTM4-202ENST00000394106 C12orf42Q96LP6 360 aa36.79■■■■□ 3.48
CMTM4-202ENST00000394106 P2RX7Q99572 595 aaKnown RBP36.79■■■■□ 3.48
CMTM4-202ENST00000394106 TRIM6-TRIM34B2RNG4 842 aa36.78■■■■□ 3.48
CMTM4-202ENST00000394106 PATL2C9JE40 543 aaKnown RBP36.78■■■■□ 3.48
CMTM4-202ENST00000394106 CCDC17Q96LX7 622 aa36.78■■■■□ 3.48
CMTM4-202ENST00000394106 MYPNQ86TC9 1320 aa36.78■■■■□ 3.48
CMTM4-202ENST00000394106 RGS19P49795 217 aa36.77■■■■□ 3.48
CMTM4-202ENST00000394106 PLEKHM2Q8IWE5 1019 aa36.77■■■■□ 3.48
CMTM4-202ENST00000394106 HTTP42858 3142 aa36.76■■■■□ 3.48
CMTM4-202ENST00000394106 CCDC129Q6ZRS4 1044 aa36.76■■■■□ 3.48
CMTM4-202ENST00000394106 CLEC10AQ8IUN9 316 aa36.76■■■■□ 3.48
CMTM4-202ENST00000394106 IFNL3Q8IZI9 196 aa36.76■■■■□ 3.48
CMTM4-202ENST00000394106 ARMC5Q96C12 935 aa36.76■■■■□ 3.48
CMTM4-202ENST00000394106 NACAP1Q9BZK3 213 aa36.76■■■■□ 3.48
CMTM4-202ENST00000394106 HERVK_113P62684 666 aa36.75■■■■□ 3.47
CMTM4-202ENST00000394106 RAET1EQ8TD07 263 aa36.75■■■■□ 3.47
CMTM4-202ENST00000394106 RILPL2Q969X0 211 aa36.75■■■■□ 3.47
CMTM4-202ENST00000394106 A0A1W2PRG0 241 aa36.74■■■■□ 3.47
CMTM4-202ENST00000394106 TNPO2O14787 897 aaKnown RBP36.74■■■■□ 3.47
CMTM4-202ENST00000394106 VCAM1P19320 739 aa36.74■■■■□ 3.47
CMTM4-202ENST00000394106 ICA1Q05084 483 aa36.74■■■■□ 3.47
CMTM4-202ENST00000394106 PRKCZQ05513 592 aa36.74■■■■□ 3.47
CMTM4-202ENST00000394106 NBPF11Q86T75 865 aa36.74■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L15C9J2P7 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L13C9JLJ4 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L11C9JVI0 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L18D6R9N7 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L22D6RA61 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L17D6RBQ6 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L19D6RCP7 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L20D6RJB6 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 USP17L24Q0WX57 530 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 SH3TC2Q8TF17 1288 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 MKNK2Q9HBH9 465 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 ARHGEF10LQ9HCE6 1279 aa36.73■■■■□ 3.47
CMTM4-202ENST00000394106 ROBO3Q96MS0 1386 aa36.72■■■■□ 3.47
CMTM4-202ENST00000394106 NAPBQ9H115 298 aa36.72■■■■□ 3.47
CMTM4-202ENST00000394106 GABRQQ9UN88 632 aa36.72■■■■□ 3.47
CMTM4-202ENST00000394106 PEX10O60683 326 aa36.71■■■■□ 3.47
CMTM4-202ENST00000394106 MLLT1Q03111 559 aaPredicted RBP36.71■■■■□ 3.47
CMTM4-202ENST00000394106 OSBPL3Q9H4L5 887 aa36.71■■■■□ 3.47
CMTM4-202ENST00000394106 RPAP3Q9H6T3 665 aaPredicted RBP36.71■■■■□ 3.47
CMTM4-202ENST00000394106 MORF4L1Q9UBU8 362 aa36.71■■■■□ 3.47
CMTM4-202ENST00000394106 ZNF333Q96JL9 665 aa36.7■■■■□ 3.47
CMTM4-202ENST00000394106 TXNRD2Q9NNW7 524 aa36.7■■■■□ 3.47
CMTM4-202ENST00000394106 HELLSQ9NRZ9 838 aa36.7■■■■□ 3.47
CMTM4-202ENST00000394106 MYCP01106 439 aaPredicted RBP36.69■■■■□ 3.46
CMTM4-202ENST00000394106 ATP2B2Q01814 1243 aa36.69■■■■□ 3.46
CMTM4-202ENST00000394106 CATSPERGQ6ZRH7 1159 aa36.69■■■■□ 3.46
CMTM4-202ENST00000394106 SIAH1Q8IUQ4 282 aa36.69■■■■□ 3.46
CMTM4-202ENST00000394106 COA7Q96BR5 231 aa36.69■■■■□ 3.46
CMTM4-202ENST00000394106 FAM227BQ96M60 508 aa36.69■■■■□ 3.46
CMTM4-202ENST00000394106 PAGR1Q9BTK6 254 aa36.69■■■■□ 3.46
CMTM4-202ENST00000394106 RASA1P20936 1047 aa36.68■■■■□ 3.46
CMTM4-202ENST00000394106 GPRC5AQ8NFJ5 357 aa36.68■■■■□ 3.46
CMTM4-202ENST00000394106 GTF3C2Q8WUA4 911 aaPredicted RBP36.68■■■■□ 3.46
CMTM4-202ENST00000394106 SH2D4AQ9H788 454 aa36.68■■■■□ 3.46
CMTM4-202ENST00000394106 A0A0D9SFI3 127 aa36.67■■■■□ 3.46
CMTM4-202ENST00000394106 KANSL2Q9H9L4 492 aa36.67■■■■□ 3.46
CMTM4-202ENST00000394106 RBPJLQ9UBG7 517 aa36.67■■■■□ 3.46
CMTM4-202ENST00000394106 PRDM1O75626 825 aa36.66■■■■□ 3.46
CMTM4-202ENST00000394106 EEF2P13639 858 aaKnown RBP36.66■■■■□ 3.46
CMTM4-202ENST00000394106 FLT3LGP49771 235 aa36.66■■■■□ 3.46
CMTM4-202ENST00000394106 NMIQ13287 307 aaPredicted RBP36.66■■■■□ 3.46
CMTM4-202ENST00000394106 TMX2Q9Y320 296 aa36.66■■■■□ 3.46
CMTM4-202ENST00000394106 FOXP2O15409 715 aa36.65■■■■□ 3.46
CMTM4-202ENST00000394106 GRK4P32298 578 aa36.65■■■■□ 3.46
CMTM4-202ENST00000394106 MCMDC2Q4G0Z9 681 aa36.65■■■■□ 3.46
CMTM4-202ENST00000394106 KIAA1755Q5JYT7 1200 aa36.65■■■■□ 3.46
CMTM4-202ENST00000394106 VPS53Q5VIR6 699 aa36.65■■■■□ 3.46
CMTM4-202ENST00000394106 TICAM2Q86XR7 235 aa36.65■■■■□ 3.46
CMTM4-202ENST00000394106 TANGO6Q9C0B7 1094 aa36.65■■■■□ 3.46
CMTM4-202ENST00000394106 ZNF287Q9HBT7 754 aa36.65■■■■□ 3.46
CMTM4-202ENST00000394106 PPARAQ07869 468 aa36.64■■■■□ 3.46
CMTM4-202ENST00000394106 POTEEQ6S8J3 1075 aa36.64■■■■□ 3.46
CMTM4-202ENST00000394106 SPICE1Q8N0Z3 855 aa36.64■■■■□ 3.46
CMTM4-202ENST00000394106 GNL3Q9BVP2 549 aaKnown RBP eCLIP36.64■■■■□ 3.46
CMTM4-202ENST00000394106 POTEFA5A3E0 1075 aa36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms