RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 PNMA1Q8ND90 353 aa24.88■■□□□ 1.57
GMDS-202ENST00000380815 MMP1P03956 469 aa24.88■■□□□ 1.57
GMDS-202ENST00000380815 PIM2Q9P1W9 311 aa24.88■■□□□ 1.57
GMDS-202ENST00000380815 SAFBQ15424 915 aaKnown RBP eCLIP24.87■■□□□ 1.572e-6■■□□□ 13.3
GMDS-202ENST00000380815 SWAP70Q9UH65 585 aa24.87■■□□□ 1.57
GMDS-202ENST00000380815 NASPP49321 788 aaPredicted RBP24.86■■□□□ 1.57
GMDS-202ENST00000380815 GNL2Q13823 731 aaKnown RBP24.86■■□□□ 1.57
GMDS-202ENST00000380815 PKN1Q16512 942 aa24.86■■□□□ 1.57
GMDS-202ENST00000380815 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.86■■□□□ 1.57
GMDS-202ENST00000380815 ATF5Q9Y2D1 282 aaPredicted RBP24.86■■□□□ 1.57
GMDS-202ENST00000380815 MYO3BQ8WXR4 1341 aa24.86■■□□□ 1.57
GMDS-202ENST00000380815 NPM3O75607 178 aaKnown RBP24.85■■□□□ 1.57
GMDS-202ENST00000380815 YEATS4O95619 227 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 XBP1P17861 261 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 RBM5P52756 815 aaKnown RBP eCLIP24.85■■□□□ 1.572e-6■□□□□ 9.6
GMDS-202ENST00000380815 LARGE2Q8N3Y3 721 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 SRBD1Q8N5C6 995 aaKnown RBP24.85■■□□□ 1.57
GMDS-202ENST00000380815 TMEM47Q9BQJ4 181 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 IDI2Q9BXS1 227 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 SERPINB13Q9UIV8 391 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 STX8Q9UNK0 236 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 V9GY48 417 aaPredicted RBP24.85■■□□□ 1.57
GMDS-202ENST00000380815 PLIN4Q96Q06 1357 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 PSME4Q14997 1843 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 CNTNAP5Q8WYK1 1306 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 NOVP48745 357 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 NFIAQ12857 509 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 LINC00301Q8NCQ3 95 aa24.85■■□□□ 1.57
GMDS-202ENST00000380815 HLA-DOAP06340 250 aa24.84■■□□□ 1.57
GMDS-202ENST00000380815 LIG1P18858 919 aa24.84■■□□□ 1.57
GMDS-202ENST00000380815 GRM4Q14833 912 aa24.84■■□□□ 1.57
GMDS-202ENST00000380815 KCNG4Q8TDN1 519 aa24.84■■□□□ 1.57
GMDS-202ENST00000380815 EHD4Q9H223 541 aa24.84■■□□□ 1.57
GMDS-202ENST00000380815 FOXP1Q9H334 677 aaPredicted RBP24.84■■□□□ 1.57
GMDS-202ENST00000380815 ZNF277Q9NRM2 450 aaPredicted RBP24.84■■□□□ 1.57
GMDS-202ENST00000380815 MYH6P13533 1939 aa24.83■■□□□ 1.57
GMDS-202ENST00000380815 GNAQP50148 359 aa24.83■■□□□ 1.57
GMDS-202ENST00000380815 BICD2Q8TD16 824 aa24.83■■□□□ 1.57
GMDS-202ENST00000380815 DHX36Q9H2U1 1008 aaKnown RBP24.83■■□□□ 1.57
GMDS-202ENST00000380815 TAOK2Q9UL54 1235 aa24.83■■□□□ 1.57
GMDS-202ENST00000380815 KCNJ14Q9UNX9 436 aa24.83■■□□□ 1.57
GMDS-202ENST00000380815 PCDHAC2Q9Y5I4 1007 aa24.83■■□□□ 1.57
GMDS-202ENST00000380815 CLIC4Q9Y696 253 aa24.83■■□□□ 1.57
GMDS-202ENST00000380815 ANO1Q5XXA6 986 aa24.82■■□□□ 1.56
GMDS-202ENST00000380815 NOSTRINQ8IVI9 506 aa24.82■■□□□ 1.56
GMDS-202ENST00000380815 DIS3L2Q8IYB7 885 aaKnown RBP24.82■■□□□ 1.56
GMDS-202ENST00000380815 VIL1P09327 827 aaKnown RBP24.82■■□□□ 1.56
GMDS-202ENST00000380815 STK38Q15208 465 aa24.82■■□□□ 1.56
GMDS-202ENST00000380815 DALRD3Q5D0E6 543 aaKnown RBP24.82■■□□□ 1.56
GMDS-202ENST00000380815 RSBN1LQ6PCB5 846 aaPredicted RBP24.82■■□□□ 1.56
GMDS-202ENST00000380815 CEP95Q96GE4 821 aa24.82■■□□□ 1.56
GMDS-202ENST00000380815 BTBD18B2RXH4 712 aa24.81■■□□□ 1.56
GMDS-202ENST00000380815 TOP1P11387 765 aaKnown RBP24.81■■□□□ 1.56
GMDS-202ENST00000380815 ME1P48163 572 aa24.81■■□□□ 1.56
GMDS-202ENST00000380815 DDX19AQ9NUU7 478 aaKnown RBP24.81■■□□□ 1.56
GMDS-202ENST00000380815 MAD2L2Q9UI95 211 aa24.81■■□□□ 1.56
GMDS-202ENST00000380815 DACT1Q9NYF0 836 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 FAM198AQ9UFP1 575 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 COL4A5P29400 1685 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 SPTLC2O15270 562 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 R3HDM1Q15032 1099 aaKnown RBP24.8■■□□□ 1.56
GMDS-202ENST00000380815 CFAP100Q494V2 611 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 ADALQ6DHV7 355 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 LZTS2Q9BRK4 669 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 PHF20Q9BVI0 1012 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 PCDHA7Q9UN72 937 aa24.8■■□□□ 1.56
GMDS-202ENST00000380815 PALM3A6NDB9 673 aaPredicted RBP24.79■■□□□ 1.56
GMDS-202ENST00000380815 SHMT1P34896 483 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 SLC39A14Q15043 492 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 SF3A1Q15459 793 aaKnown RBP24.79■■□□□ 1.56
GMDS-202ENST00000380815 ZFPM1Q8IX07 1006 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 SHISA4Q96DD7 197 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 GMLQ99445 158 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 NUP62CLQ9H1M0 184 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 TSPY26PQ9H489 355 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 VPS54Q9P1Q0 977 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 ZNRF3Q9ULT6 936 aa24.79■■□□□ 1.56
GMDS-202ENST00000380815 IGKV6D-41A0A0C4DH26 115 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 A0A1W2PQ27 194 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 A0A1W2PQ64 194 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 A0A1W2PQD8 194 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 hCG_1642624A0A1W2PR95 340 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 PSMD14O00487 310 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 SCG2P13521 617 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 CACNB3P54284 484 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 PFKFB3Q16875 520 aaPredicted RBP24.78■■□□□ 1.56
GMDS-202ENST00000380815 CCAR1Q8IX12 1150 aaKnown RBP24.78■■□□□ 1.56
GMDS-202ENST00000380815 STAG2Q8N3U4 1231 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 MTMR4Q9NYA4 1195 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 PI4KBQ9UBF8 816 aa24.78■■□□□ 1.56
GMDS-202ENST00000380815 NR1I2O75469 434 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 RAD17O75943 681 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 AKR1B1P15121 316 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 NIM1KQ8IY84 436 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 SGIP1Q9BQI5 828 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 RBSNQ9H1K0 784 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 CD2APQ9Y5K6 639 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 TCP10Q12799 353 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 RILPL1Q5EBL4 403 aa24.77■■□□□ 1.56
GMDS-202ENST00000380815 PRMT6Q96LA8 375 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms