RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 BMS1Q14692 1282 aaKnown RBP23.21■■□□□ 1.31
CLN5-201ENST00000377453 APTXQ7Z2E3 356 aaKnown RBP23.21■■□□□ 1.31
CLN5-201ENST00000377453 PAGE5Q96GU1 130 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 JAG2Q9Y219 1238 aa23.21■■□□□ 1.31
CLN5-201ENST00000377453 MAGEB6P1A0A0J9YX57 407 aa23.2■■□□□ 1.3
CLN5-201ENST00000377453 NUTM2AQ8IVF1 878 aaPredicted RBP23.2■■□□□ 1.3
CLN5-201ENST00000377453 SASH3O75995 380 aa23.2■■□□□ 1.3
CLN5-201ENST00000377453 ABL1P00519 1130 aa23.2■■□□□ 1.3
CLN5-201ENST00000377453 CDC25AP30304 524 aa23.2■■□□□ 1.3
CLN5-201ENST00000377453 CCT6AP40227 531 aaKnown RBP23.2■■□□□ 1.3
CLN5-201ENST00000377453 CRKLP46109 303 aaKnown RBP23.2■■□□□ 1.3
CLN5-201ENST00000377453 RGS22Q8NE09 1264 aa23.2■■□□□ 1.3
CLN5-201ENST00000377453 EIF5P55010 431 aaKnown RBP23.19■■□□□ 1.3
CLN5-201ENST00000377453 PPP2R3AQ06190 1150 aa23.19■■□□□ 1.3
CLN5-201ENST00000377453 TMCO3Q6UWJ1 677 aa23.19■■□□□ 1.3
CLN5-201ENST00000377453 CCDC34Q96HJ3 373 aa23.19■■□□□ 1.3
CLN5-201ENST00000377453 STX10O60499 249 aa23.19■■□□□ 1.3
CLN5-201ENST00000377453 ZRANB2O95218 330 aaKnown RBP eCLIP23.19■■□□□ 1.3
CLN5-201ENST00000377453 KCNQ4P56696 695 aa23.19■■□□□ 1.3
CLN5-201ENST00000377453 FUT2Q10981 343 aa23.19■■□□□ 1.3
CLN5-201ENST00000377453 ZNF384Q8TF68 577 aa23.19■■□□□ 1.3
CLN5-201ENST00000377453 CCDC12Q8WUD4 166 aaPredicted RBP23.19■■□□□ 1.3
CLN5-201ENST00000377453 ZCCHC17Q9NP64 241 aaKnown RBP23.19■■□□□ 1.3
CLN5-201ENST00000377453 COL1A1P02452 1464 aaPredicted RBP23.18■■□□□ 1.3
CLN5-201ENST00000377453 CCDC196A0A1B0GTZ2 297 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 EXOC5O00471 708 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 GNAT2P19087 354 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 ATP6V1AP38606 617 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 FAM47AQ5JRC9 791 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 IGSF22Q8N9C0 903 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 MAPK8IP1Q9UQF2 711 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 SYNRGQ9UMZ2 1314 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 NID2Q14112 1375 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 ABCA3Q99758 1704 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 LRP5O75197 1615 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 KLRK1P26718 216 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 KRT2P35908 639 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 DHX8Q14562 1220 aaKnown RBP23.18■■□□□ 1.3
CLN5-201ENST00000377453 CCDC152Q4G0S7 254 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 IFIT1BQ5T764 474 aaKnown RBP23.18■■□□□ 1.3
CLN5-201ENST00000377453 ESR2Q92731 530 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 ZSCAN10Q96SZ4 725 aaPredicted RBP23.18■■□□□ 1.3
CLN5-201ENST00000377453 CTNND2Q9UQB3 1225 aa23.18■■□□□ 1.3
CLN5-201ENST00000377453 ANKRD36CQ5JPF3 1778 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 A0A1B0GTH6 734 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 FCHSD1Q86WN1 690 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 ZNF579Q8NAF0 562 aaKnown RBP23.17■■□□□ 1.3
CLN5-201ENST00000377453 SPATA20Q8TB22 786 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 PHF20Q9BVI0 1012 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 RNF41Q9H4P4 317 aaPredicted RBP23.17■■□□□ 1.3
CLN5-201ENST00000377453 MRFAP1Q9Y605 127 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 TIAM2Q8IVF5 1701 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 CAMTA2O94983 1202 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 MAP3K9P80192 1104 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 ITPK1Q13572 414 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 DACH1Q9UI36 760 aa23.17■■□□□ 1.3
CLN5-201ENST00000377453 AKR1B15C9JRZ8 316 aaPredicted RBP23.16■■□□□ 1.3
CLN5-201ENST00000377453 CUL4BQ13620 913 aa23.16■■□□□ 1.3
CLN5-201ENST00000377453 NPY5RQ15761 445 aa23.16■■□□□ 1.3
CLN5-201ENST00000377453 RIOK1Q9BRS2 568 aaKnown RBP23.16■■□□□ 1.3
CLN5-201ENST00000377453 NOL10Q9BSC4 688 aaKnown RBP23.16■■□□□ 1.3
CLN5-201ENST00000377453 RNF26Q9BY78 433 aaPredicted RBP23.16■■□□□ 1.3
CLN5-201ENST00000377453 PUF60Q9UHX1 559 aaKnown RBP23.16■■□□□ 1.3
CLN5-201ENST00000377453 CEP131Q9UPN4 1083 aa23.16■■□□□ 1.3
CLN5-201ENST00000377453 EFCAB8A8MWE9 144 aa23.16■■□□□ 1.3
CLN5-201ENST00000377453 NTSR2O95665 410 aa23.16■■□□□ 1.3
CLN5-201ENST00000377453 CYP2D6P10635 497 aa23.16■■□□□ 1.3
CLN5-201ENST00000377453 AATFQ9NY61 560 aaKnown RBP eCLIP23.16■■□□□ 1.3
CLN5-201ENST00000377453 RNF225M0QZC1 329 aaPredicted RBP23.15■■□□□ 1.3
CLN5-201ENST00000377453 CASP14P31944 242 aa23.15■■□□□ 1.3
CLN5-201ENST00000377453 PTGDRQ13258 359 aa23.15■■□□□ 1.3
CLN5-201ENST00000377453 CCDC24Q8N4L8 307 aa23.15■■□□□ 1.3
CLN5-201ENST00000377453 CCDC87Q9NVE4 849 aa23.15■■□□□ 1.3
CLN5-201ENST00000377453 PPP1R3GB7ZBB8 358 aa23.15■■□□□ 1.3
CLN5-201ENST00000377453 FXR1P51114 621 aaKnown RBP eCLIP23.15■■□□□ 1.3
CLN5-201ENST00000377453 BICDL1Q6ZP65 573 aa23.15■■□□□ 1.3
CLN5-201ENST00000377453 TMTC2Q8N394 836 aa23.15■■□□□ 1.3
CLN5-201ENST00000377453 ACRBPQ8NEB7 543 aa23.15■■□□□ 1.3
CLN5-201ENST00000377453 PIK3AP1Q6ZUJ8 805 aa23.14■■□□□ 1.3
CLN5-201ENST00000377453 DOCK2Q92608 1830 aa23.14■■□□□ 1.3
CLN5-201ENST00000377453 XDHP47989 1333 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 USP17L12C9JPN9 530 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 USP17L21D6R901 530 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 MYO1BO43795 1136 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 ADAMTS2O95450 1211 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 TUBB4AP04350 444 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 MCM7P33993 719 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 IL17AQ16552 155 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 SPATA1Q5VX52 437 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 SLC51AQ86UW1 340 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 ELOA2Q8IYF1 753 aaPredicted RBP23.14■■□□□ 1.29
CLN5-201ENST00000377453 SRBD1Q8N5C6 995 aaKnown RBP23.14■■□□□ 1.29
CLN5-201ENST00000377453 PARD6BQ9BYG5 372 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 MYH2Q9UKX2 1941 aa23.14■■□□□ 1.29
CLN5-201ENST00000377453 GYS2P54840 703 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 TTC38Q5R3I4 469 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 CATIPQ7Z7H3 387 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 TRIML1Q8N9V2 468 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 MTRQ99707 1265 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 VPS16Q9H269 839 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms