RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 TM4SF4P48230 202 aa22.47■■□□□ 1.19
COL16A1-201ENST00000373667 HMGCS2P54868 508 aa22.47■■□□□ 1.19
COL16A1-201ENST00000373667 MAP2K1Q02750 393 aaPredicted RBP22.47■■□□□ 1.19
COL16A1-201ENST00000373667 ICA1Q05084 483 aa22.47■■□□□ 1.19
COL16A1-201ENST00000373667 MTMR2Q13614 643 aa22.47■■□□□ 1.19
COL16A1-201ENST00000373667 CREB3L3Q68CJ9 461 aa22.47■■□□□ 1.19
COL16A1-201ENST00000373667 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.47■■□□□ 1.19
COL16A1-201ENST00000373667 ARHGEF10LQ9HCE6 1279 aa22.47■■□□□ 1.19
COL16A1-201ENST00000373667 PHIPQ8WWQ0 1821 aa22.47■■□□□ 1.19
COL16A1-201ENST00000373667 LAMA4Q16363 1823 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 SLC27A2O14975 620 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 EEF2P13639 858 aaKnown RBP22.46■■□□□ 1.19
COL16A1-201ENST00000373667 BACE1P56817 501 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 TRDNQ13061 729 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 NECTIN1Q15223 517 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 OTUD7BQ6GQQ9 843 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 FASTKD5Q7L8L6 764 aaKnown RBP22.46■■□□□ 1.19
COL16A1-201ENST00000373667 ESR2Q92731 530 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 BEGAINQ9BUH8 593 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 KRT23Q9C075 422 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 CNNM2Q9H8M5 875 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 TMOD4Q9NZQ9 345 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 CLIP2Q9UDT6 1046 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 TAF6LQ9Y6J9 622 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 NEDD4P46934 1319 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 CEP350Q5VT06 3117 aa22.46■■□□□ 1.19
COL16A1-201ENST00000373667 A0A0G2JLL6 359 aaPredicted RBP22.45■■□□□ 1.18
COL16A1-201ENST00000373667 TESPA1A2RU30 521 aaPredicted RBP22.45■■□□□ 1.18
COL16A1-201ENST00000373667 B4E1Z4 1266 aa22.45■■□□□ 1.18
COL16A1-201ENST00000373667 C19orf81C9J6K1 198 aa22.45■■□□□ 1.18
COL16A1-201ENST00000373667 E7EWF7 191 aa22.45■■□□□ 1.18
COL16A1-201ENST00000373667 DGKZQ13574 1117 aa22.45■■□□□ 1.18
COL16A1-201ENST00000373667 RNF20Q5VTR2 975 aa22.45■■□□□ 1.18
COL16A1-201ENST00000373667 PRRT2Q7Z6L0 340 aaPredicted RBP22.45■■□□□ 1.18
COL16A1-201ENST00000373667 IFNL1Q8IU54 200 aa22.45■■□□□ 1.18
COL16A1-201ENST00000373667 JMYQ8N9B5 988 aa22.45■■□□□ 1.18
COL16A1-201ENST00000373667 PTPN18Q99952 460 aa22.45■■□□□ 1.18
COL16A1-201ENST00000373667 A0A1W2PRG0 241 aa22.44■■□□□ 1.18
COL16A1-201ENST00000373667 KDM4AO75164 1064 aa22.44■■□□□ 1.18
COL16A1-201ENST00000373667 USP17L2Q6R6M4 530 aa22.44■■□□□ 1.18
COL16A1-201ENST00000373667 SIAH1Q8IUQ4 282 aa22.44■■□□□ 1.18
COL16A1-201ENST00000373667 CEP95Q96GE4 821 aa22.44■■□□□ 1.18
COL16A1-201ENST00000373667 IGKV6D-41A0A0C4DH26 115 aa22.43■■□□□ 1.18
COL16A1-201ENST00000373667 BTBD19C9JJ37 291 aa22.43■■□□□ 1.18
COL16A1-201ENST00000373667 IGF2BP3O00425 579 aaKnown RBP eCLIP22.43■■□□□ 1.18
COL16A1-201ENST00000373667 RAD21O60216 631 aa22.43■■□□□ 1.18
COL16A1-201ENST00000373667 NMT2O60551 498 aa22.43■■□□□ 1.18
COL16A1-201ENST00000373667 RALYLQ86SE5 291 aaKnown RBP22.43■■□□□ 1.18
COL16A1-201ENST00000373667 NKX2-3Q8TAU0 364 aa22.43■■□□□ 1.18
COL16A1-201ENST00000373667 SH2D4AQ9H788 454 aa22.43■■□□□ 1.18
COL16A1-201ENST00000373667 MTMR4Q9NYA4 1195 aa22.43■■□□□ 1.18
COL16A1-201ENST00000373667 NYAP2Q9P242 653 aa22.43■■□□□ 1.18
COL16A1-201ENST00000373667 TRPA1O75762 1119 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 USP14P54578 494 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 MOGSQ13724 837 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 SH3D19Q5HYK7 790 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 NCOA7Q8NI08 942 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 ZKSCAN3Q9BRR0 538 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 KIAA1683Q9H0B3 1180 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 EMILIN3Q9NT22 766 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 ZSWIM5Q9P217 1185 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 STX8Q9UNK0 236 aa22.42■■□□□ 1.18
COL16A1-201ENST00000373667 EIF5BO60841 1220 aaKnown RBP22.41■■□□□ 1.18
COL16A1-201ENST00000373667 TTLL1O95922 423 aa22.41■■□□□ 1.18
COL16A1-201ENST00000373667 ZKSCAN1P17029 563 aaPredicted RBP22.41■■□□□ 1.18
COL16A1-201ENST00000373667 PPP4R3BQ5MIZ7 849 aa22.41■■□□□ 1.18
COL16A1-201ENST00000373667 STOX1Q6ZVD7 989 aa22.41■■□□□ 1.18
COL16A1-201ENST00000373667 FAM43AQ8N2R8 423 aa22.41■■□□□ 1.18
COL16A1-201ENST00000373667 PROCA1Q8NCQ7 364 aaPredicted RBP22.41■■□□□ 1.18
COL16A1-201ENST00000373667 IL17RBQ9NRM6 502 aa22.41■■□□□ 1.18
COL16A1-201ENST00000373667 WBP1LQ9NX94 342 aa22.41■■□□□ 1.18
COL16A1-201ENST00000373667 RNF186Q9NXI6 227 aa22.41■■□□□ 1.18
COL16A1-201ENST00000373667 TMX2Q9Y320 296 aa22.41■■□□□ 1.18
COL16A1-201ENST00000373667 PLIN4Q96Q06 1357 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 THSD7BQ9C0I4 1608 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 PDHXO00330 501 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 ALDH1A1P00352 501 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 TREML2Q5T2D2 321 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 GPAT2Q6NUI2 795 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 ANKRD23Q86SG2 305 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 IQCA1Q86XH1 822 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 USP26Q9BXU7 913 aa22.4■■□□□ 1.18
COL16A1-201ENST00000373667 MCCP23508 829 aa22.39■■□□□ 1.17
COL16A1-201ENST00000373667 NT5C2P49902 561 aa22.39■■□□□ 1.17
COL16A1-201ENST00000373667 GOPCQ9HD26 462 aa22.39■■□□□ 1.17
COL16A1-201ENST00000373667 TCP11L1Q9NUJ3 509 aa22.39■■□□□ 1.17
COL16A1-201ENST00000373667 AGTPBP1Q9UPW5 1226 aa22.39■■□□□ 1.17
COL16A1-201ENST00000373667 PTPRFP10586 1907 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 GREB1LQ9C091 1923 aaPredicted RBP22.38■■□□□ 1.17
COL16A1-201ENST00000373667 TBC1D8O95759 1140 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 HSPA4P34932 840 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 PABPC4Q13310 644 aaKnown RBP eCLIP22.38■■□□□ 1.17
COL16A1-201ENST00000373667 TAF1CQ15572 869 aaPredicted RBP22.38■■□□□ 1.17
COL16A1-201ENST00000373667 CYB5R4Q7L1T6 521 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 RASEFQ8IZ41 740 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 SPICE1Q8N0Z3 855 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 LRRC47Q8N1G4 583 aaKnown RBP22.38■■□□□ 1.17
COL16A1-201ENST00000373667 MKL1Q969V6 931 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 CHMP4CQ96CF2 233 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 UBAC1Q9BSL1 405 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms